Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU11-2P-201ENST00000516898 142 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 AC012493.3-201ENST00000604494 112 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 GHRLOS.1-201ENST00000610995 70 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 RNU1-36P-201ENST00000365130 165 ntBASIC2.26□□□□□ -2.05
NUCKS1Q9H1E3 MIR1185-1-201ENST00000408598 86 ntBASIC2.26□□□□□ -2.05
NUCKS1Q9H1E3 AL606490.4-201ENST00000423117 127 ntBASIC2.26□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.42-201ENST00000362660 108 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-403P-201ENST00000363163 104 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.207-201ENST00000364142 106 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-654P-201ENST00000364373 107 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-154P-201ENST00000384306 106 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.536-201ENST00000384621 113 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 MIR676-201ENST00000390702 67 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 MIR942-201ENST00000401111 86 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNA5SP95-201ENST00000410319 137 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-947P-201ENST00000516264 106 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 TRDV1-202ENST00000621643 102 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNA5SP160-201ENST00000364866 120 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 SNORA64-201ENST00000384674 134 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 MIR519A1-201ENST00000385257 85 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-663P-201ENST00000391105 106 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 MIR4648-201ENST00000580107 72 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 ZNF209P-201ENST00000593450 2304 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 SNORA67.3-201ENST00000384366 140 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-291P-201ENST00000384720 107 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 MIR18B-201ENST00000454574 71 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 AC015688.6-201ENST00000577737 104 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 AC013244.2-201ENST00000603396 103 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 MIR103A2-201ENST00000362154 78 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 MIR101-2-201ENST00000362195 79 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-340P-201ENST00000364005 107 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.239-201ENST00000364444 113 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-580P-201ENST00000365159 107 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.371-201ENST00000365591 113 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 AC055731.1-201ENST00000474387 401 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 AL133373.1-201ENST00000497098 94 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.809-201ENST00000516058 95 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 RNU7-156P-201ENST00000517214 74 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 SNRPGP19-201ENST00000603826 189 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-471P-201ENST00000383944 106 ntBASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 RPS27P16-201ENST00000425758 201 ntBASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 MIR548H5-201ENST00000580314 60 ntBASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNU6-1260P-201ENST00000362944 107 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNA5SP264-201ENST00000363115 107 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNY4P3-201ENST00000365254 95 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 MIR1261-201ENST00000408659 82 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 SNORA77B-201ENST00000578179 125 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 MIR4696-201ENST00000581431 70 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 MIR3140-201ENST00000583685 90 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNU7-10P-201ENST00000607194 63 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 U6.100-201ENST00000636230 99 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNU6-664P-201ENST00000362381 107 ntBASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 SNORD101-201ENST00000384027 73 ntBASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 AC092628.1-201ENST00000436250 252 ntBASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.18□□□□□ -2.06
NUCKS1Q9H1E3 AC023934.1-201ENST00000574529 2389 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 Y_RNA.13-201ENST00000362403 112 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 Y_RNA.56-201ENST00000362798 112 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 MIR2113-201ENST00000459007 91 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 RNU7-185P-201ENST00000459215 60 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 AC005520.4-201ENST00000604337 90 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 MIR6082-201ENST00000613604 109 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 Y_RNA.606-201ENST00000410579 103 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 RNU6-1054P-201ENST00000411293 104 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 snoU13.21-201ENST00000459368 105 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 Y_RNA.697-201ENST00000516776 113 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 MTRNR2L2-201ENST00000604882 87 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 MIR219B-201ENST00000637023 88 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.15□□□□□ -2.06
NUCKS1Q9H1E3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NUCKS1Q9H1E3 MIR3675-201ENST00000583661 73 ntBASIC2.15□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-681P-201ENST00000364012 104 ntBASIC2.14□□□□□ -2.07
NUCKS1Q9H1E3 MIR1257-201ENST00000408490 117 ntBASIC2.14□□□□□ -2.07
NUCKS1Q9H1E3 AC097635.1-201ENST00000450678 155 ntBASIC2.14□□□□□ -2.07
NUCKS1Q9H1E3 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms