Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6-934P-201ENST00000365154 107 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 SNORD58A-201ENST00000383875 65 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 AC015818.7-201ENST00000428754 109 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 AC087499.7-201ENST00000441958 109 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 RNU7-185P-201ENST00000459215 60 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 RNU6-762P-201ENST00000517107 102 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.34□□□□□ -2.19
NDC1Q9BTX1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NDC1Q9BTX1 RNU6-403P-201ENST00000363163 104 ntBASIC1.33□□□□□ -2.2
NDC1Q9BTX1 RNU6-392P-201ENST00000364926 101 ntBASIC1.33□□□□□ -2.2
NDC1Q9BTX1 RNU6-1134P-201ENST00000365156 101 ntBASIC1.33□□□□□ -2.2
NDC1Q9BTX1 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
NDC1Q9BTX1 SNORD111-201ENST00000408139 94 ntBASIC1.33□□□□□ -2.2
NDC1Q9BTX1 SNORA72.7-201ENST00000516349 94 ntBASIC1.33□□□□□ -2.2
NDC1Q9BTX1 SNORA25.16-201ENST00000516741 121 ntBASIC1.33□□□□□ -2.2
NDC1Q9BTX1 AC106800.4-201ENST00000614905 153 ntBASIC1.33□□□□□ -2.2
NDC1Q9BTX1 AC008163.1-202ENST00000636004 2889 ntBASIC1.32□□□□□ -2.2
NDC1Q9BTX1 SNORD116-10-201ENST00000363791 102 ntBASIC1.32□□□□□ -2.2
NDC1Q9BTX1 MIR1257-201ENST00000408490 117 ntBASIC1.32□□□□□ -2.2
NDC1Q9BTX1 MIR1302-4-201ENST00000408701 150 ntBASIC1.32□□□□□ -2.2
NDC1Q9BTX1 BX276092.1-201ENST00000427368 251 ntBASIC1.32□□□□□ -2.2
NDC1Q9BTX1 RNU6-531P-201ENST00000516694 104 ntBASIC1.32□□□□□ -2.2
NDC1Q9BTX1 AC020891.4-201ENST00000605745 93 ntBASIC1.32□□□□□ -2.2
NDC1Q9BTX1 MIR7111-201ENST00000619751 72 ntBASIC1.32□□□□□ -2.2
NDC1Q9BTX1 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 SNORA72.6-201ENST00000384520 129 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 MIR181B2-201ENST00000385004 89 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 RNU4-83P-201ENST00000410863 133 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 SNRPGP12-201ENST00000449481 213 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 MIR4771-2-201ENST00000577758 74 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 MIR4771-1-201ENST00000582617 74 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
NDC1Q9BTX1 Y_RNA.17-201ENST00000362433 111 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 RNU6-1125P-201ENST00000363601 107 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 RNU6-53P-201ENST00000365367 106 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 RNU6-480P-201ENST00000384332 107 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 RNU6-850P-201ENST00000516934 103 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.3□□□□□ -2.2
NDC1Q9BTX1 RNU4-58P-201ENST00000363192 141 ntBASIC1.29□□□□□ -2.2
NDC1Q9BTX1 Y_RNA.593-201ENST00000410292 98 ntBASIC1.29□□□□□ -2.2
NDC1Q9BTX1 RNY4P29-201ENST00000410801 97 ntBASIC1.29□□□□□ -2.2
NDC1Q9BTX1 RPS26P5-201ENST00000418544 335 ntBASIC1.29□□□□□ -2.2
NDC1Q9BTX1 AL513043.2-201ENST00000573941 143 ntBASIC1.29□□□□□ -2.2
NDC1Q9BTX1 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
NDC1Q9BTX1 AC025521.1-201ENST00000621624 286 ntBASIC1.29□□□□□ -2.2
NDC1Q9BTX1 RNU6-571P-201ENST00000384128 107 ntBASIC1.28□□□□□ -2.2
NDC1Q9BTX1 SNORD26-201ENST00000384147 75 ntBASIC1.28□□□□□ -2.2
NDC1Q9BTX1 MIR450A2-201ENST00000385022 100 ntBASIC1.28□□□□□ -2.2
NDC1Q9BTX1 MIR125B2-201ENST00000385128 89 ntBASIC1.28□□□□□ -2.2
NDC1Q9BTX1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
NDC1Q9BTX1 SNORA26.2-201ENST00000390922 122 ntBASIC1.28□□□□□ -2.2
NDC1Q9BTX1 AC062037.1-201ENST00000605302 128 ntBASIC1.28□□□□□ -2.2
NDC1Q9BTX1 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
NDC1Q9BTX1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 Y_RNA.57-201ENST00000362806 113 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 Y_RNA.388-201ENST00000383919 113 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 MIR1276-201ENST00000408707 83 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 RNU6-994P-201ENST00000410507 111 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 AC013244.2-201ENST00000603396 103 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 MIR8066-201ENST00000617280 78 ntBASIC1.27□□□□□ -2.21
NDC1Q9BTX1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NDC1Q9BTX1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
NDC1Q9BTX1 SNORD116-22-201ENST00000384430 92 ntBASIC1.26□□□□□ -2.21
NDC1Q9BTX1 MIR518E-201ENST00000385252 88 ntBASIC1.26□□□□□ -2.21
NDC1Q9BTX1 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
NDC1Q9BTX1 RNU7-156P-201ENST00000517214 74 ntBASIC1.26□□□□□ -2.21
NDC1Q9BTX1 MIR6504-201ENST00000613520 61 ntBASIC1.26□□□□□ -2.21
NDC1Q9BTX1 MIR6082-201ENST00000613604 109 ntBASIC1.26□□□□□ -2.21
NDC1Q9BTX1 MIR494-201ENST00000349529 81 ntBASIC1.25□□□□□ -2.21
NDC1Q9BTX1 RNU6-369P-201ENST00000362515 102 ntBASIC1.25□□□□□ -2.21
NDC1Q9BTX1 RNU6-402P-201ENST00000410678 103 ntBASIC1.25□□□□□ -2.21
NDC1Q9BTX1 MIR4676-201ENST00000583078 72 ntBASIC1.25□□□□□ -2.21
NDC1Q9BTX1 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
NDC1Q9BTX1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
NDC1Q9BTX1 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
NDC1Q9BTX1 Y_RNA.609-201ENST00000410669 89 ntBASIC1.24□□□□□ -2.21
NDC1Q9BTX1 AC067940.1-201ENST00000458411 300 ntBASIC1.24□□□□□ -2.21
NDC1Q9BTX1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.24□□□□□ -2.21
NDC1Q9BTX1 RN7SKP12-201ENST00000516275 143 ntBASIC1.24□□□□□ -2.21
NDC1Q9BTX1 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
NDC1Q9BTX1 MIR4668-201ENST00000582284 70 ntBASIC1.24□□□□□ -2.21
NDC1Q9BTX1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NDC1Q9BTX1 MIR101-2-201ENST00000362195 79 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 Y_RNA.42-201ENST00000362660 108 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms