Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 snoU83B.1-201ENST00000517136 88 ntBASIC-2.05□□□□□ -2.74
CCDC42Q96M95 AC104985.2-201ENST00000620598 500 ntBASIC-2.05□□□□□ -2.74
CCDC42Q96M95 snoR1.1-201ENST00000628177 80 ntBASIC-2.05□□□□□ -2.74
CCDC42Q96M95 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
CCDC42Q96M95 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.06□□□□□ -2.74
CCDC42Q96M95 MIR582-201ENST00000365731 98 ntBASIC-2.06□□□□□ -2.74
CCDC42Q96M95 SNORD18.2-201ENST00000459604 70 ntBASIC-2.06□□□□□ -2.74
CCDC42Q96M95 MIR3908-201ENST00000579798 126 ntBASIC-2.06□□□□□ -2.74
CCDC42Q96M95 AC112487.2-201ENST00000637950 304 ntBASIC-2.06□□□□□ -2.74
CCDC42Q96M95 Y_RNA.178-201ENST00000363832 102 ntBASIC-2.07□□□□□ -2.74
CCDC42Q96M95 RNU6-1157P-201ENST00000384456 106 ntBASIC-2.07□□□□□ -2.74
CCDC42Q96M95 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.07□□□□□ -2.74
CCDC42Q96M95 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.07□□□□□ -2.74
CCDC42Q96M95 RNU6-706P-201ENST00000517229 104 ntBASIC-2.07□□□□□ -2.74
CCDC42Q96M95 AC113139.1-201ENST00000605049 239 ntBASIC-2.07□□□□□ -2.74
CCDC42Q96M95 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.08□□□□□ -2.74
CCDC42Q96M95 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.08□□□□□ -2.74
CCDC42Q96M95 MIR1277-201ENST00000408536 78 ntBASIC-2.08□□□□□ -2.74
CCDC42Q96M95 RNU6-592P-201ENST00000411333 103 ntBASIC-2.08□□□□□ -2.74
CCDC42Q96M95 SNORD27-201ENST00000363981 72 ntBASIC-2.09□□□□□ -2.74
CCDC42Q96M95 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.09□□□□□ -2.74
CCDC42Q96M95 SNORD116-1-201ENST00000384335 95 ntBASIC-2.09□□□□□ -2.74
CCDC42Q96M95 AC097510.1-201ENST00000510945 133 ntBASIC-2.09□□□□□ -2.74
CCDC42Q96M95 RNU4-32P-201ENST00000363404 141 ntBASIC-2.1□□□□□ -2.75
CCDC42Q96M95 Y_RNA.142-201ENST00000363491 102 ntBASIC-2.1□□□□□ -2.75
CCDC42Q96M95 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.1□□□□□ -2.75
CCDC42Q96M95 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.1□□□□□ -2.75
CCDC42Q96M95 AL161932.1-201ENST00000437408 146 ntBASIC-2.1□□□□□ -2.75
CCDC42Q96M95 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.1□□□□□ -2.75
CCDC42Q96M95 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.11□□□□□ -2.75
CCDC42Q96M95 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.11□□□□□ -2.75
CCDC42Q96M95 Y_RNA.495-201ENST00000384435 112 ntBASIC-2.11□□□□□ -2.75
CCDC42Q96M95 RNY4P36-201ENST00000391116 96 ntBASIC-2.11□□□□□ -2.75
CCDC42Q96M95 RNU6-243P-201ENST00000391140 107 ntBASIC-2.11□□□□□ -2.75
CCDC42Q96M95 AL442663.2-201ENST00000554385 511 ntBASIC-2.11□□□□□ -2.75
CCDC42Q96M95 MTND4LP32-201ENST00000636111 270 ntBASIC-2.11□□□□□ -2.75
CCDC42Q96M95 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 SNORD114-4-201ENST00000363962 75 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 SNORD116-29-201ENST00000384516 83 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 HAR1A.1-201ENST00000459583 118 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 RNA5SP236-201ENST00000516169 116 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 AC084781.2-201ENST00000615568 161 ntBASIC-2.12□□□□□ -2.75
CCDC42Q96M95 MIR409-201ENST00000362237 79 ntBASIC-2.13□□□□□ -2.75
CCDC42Q96M95 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.13□□□□□ -2.75
CCDC42Q96M95 RNU6-381P-201ENST00000391259 108 ntBASIC-2.13□□□□□ -2.75
CCDC42Q96M95 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.13□□□□□ -2.75
CCDC42Q96M95 MIR4320-201ENST00000636981 65 ntBASIC-2.13□□□□□ -2.75
CCDC42Q96M95 SNORD36A-201ENST00000362874 73 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 SNORA63.7-201ENST00000365579 123 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 RNU6-588P-201ENST00000410281 105 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 SNORD57-201ENST00000448188 72 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 RNU7-164P-201ENST00000459221 62 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 AC021443.1-201ENST00000604478 211 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.14□□□□□ -2.75
CCDC42Q96M95 SNORD115-23-201ENST00000364461 82 ntBASIC-2.15□□□□□ -2.75
CCDC42Q96M95 MIR34C-201ENST00000384831 77 ntBASIC-2.15□□□□□ -2.75
CCDC42Q96M95 AC069439.1-201ENST00000494739 167 ntBASIC-2.15□□□□□ -2.75
CCDC42Q96M95 RNU7-123P-201ENST00000515911 60 ntBASIC-2.15□□□□□ -2.75
CCDC42Q96M95 AC138907.4-201ENST00000570107 226 ntBASIC-2.15□□□□□ -2.75
CCDC42Q96M95 AC092794.1-201ENST00000612734 582 ntBASIC-2.15□□□□□ -2.75
CCDC42Q96M95 MIR6773-201ENST00000612812 74 ntBASIC-2.15□□□□□ -2.75
CCDC42Q96M95 SNORD114-17-201ENST00000364699 75 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 Y_RNA.452-201ENST00000384202 108 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 RNU6-616P-201ENST00000384353 107 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 SNORD38.2-201ENST00000384470 69 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 SNORD116-6-201ENST00000384711 96 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 MIR1302-11-201ENST00000408051 138 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 MIR1302-9-201ENST00000408365 138 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 MIR1302-10-201ENST00000408734 138 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 MIR1302-2-201ENST00000607096 138 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 AC090574.1-201ENST00000623186 233 ntBASIC-2.16□□□□□ -2.76
CCDC42Q96M95 Y_RNA.52-201ENST00000362760 96 ntBASIC-2.17□□□□□ -2.76
CCDC42Q96M95 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.17□□□□□ -2.76
CCDC42Q96M95 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.17□□□□□ -2.76
CCDC42Q96M95 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.17□□□□□ -2.76
CCDC42Q96M95 AC138393.2-201ENST00000414742 246 ntBASIC-2.17□□□□□ -2.76
CCDC42Q96M95 RNU6-762P-201ENST00000517107 102 ntBASIC-2.17□□□□□ -2.76
CCDC42Q96M95 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.17□□□□□ -2.76
CCDC42Q96M95 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.17□□□□□ -2.76
CCDC42Q96M95 RNU6-121P-201ENST00000410525 99 ntBASIC-2.18□□□□□ -2.76
CCDC42Q96M95 RNU6-240P-201ENST00000516098 97 ntBASIC-2.18□□□□□ -2.76
CCDC42Q96M95 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 RNU6-957P-201ENST00000363652 99 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 Y_RNA.377-201ENST00000365644 108 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 SNORD101-201ENST00000384027 73 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 MIRLET7B-201ENST00000385140 83 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 AL121914.1-201ENST00000450188 156 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.19□□□□□ -2.76
CCDC42Q96M95 RNU7-152P-201ENST00000458982 64 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.19□□□□□ -2.76
CCDC42Q96M95 RNU6-103P-201ENST00000363686 107 ntBASIC-2.2□□□□□ -2.76
CCDC42Q96M95 SNORA62.4-201ENST00000365504 151 ntBASIC-2.2□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms