Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 MIR520E-201ENST00000384867 87 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 MIR563-201ENST00000385080 79 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 MIR548G-201ENST00000408442 89 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 RNU11-2P-201ENST00000516898 142 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 MTND5P40-201ENST00000559945 246 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 RNU6-90P-201ENST00000606352 106 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 AP001362.1-201ENST00000625165 124 ntBASIC1.24□□□□□ -2.21
VCPIP1Q96JH7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 MIR30D-201ENST00000362283 70 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 Y_RNA.96-201ENST00000363092 109 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 Y_RNA.190-201ENST00000363964 101 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 MT-TN-201ENST00000387400 73 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 RNU6-972P-201ENST00000391208 107 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 MIR1302-4-201ENST00000408701 150 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 RNU6-887P-201ENST00000410660 100 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 MIR4439-201ENST00000583746 80 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 uc_338.6-201ENST00000613544 171 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 SEPT14P17-201ENST00000617978 177 ntBASIC1.23□□□□□ -2.21
VCPIP1Q96JH7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 SNORD38.2-201ENST00000384470 69 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 Y_RNA.567-201ENST00000384736 106 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 RNU6-910P-201ENST00000390844 107 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 SNORA26.2-201ENST00000390922 122 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 U8.15-201ENST00000390947 134 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 RNU6-613P-201ENST00000410412 108 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 AC103810.7-201ENST00000607821 91 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
VCPIP1Q96JH7 SNORD114-26-201ENST00000363543 72 ntBASIC1.21□□□□□ -2.22
VCPIP1Q96JH7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.21□□□□□ -2.22
VCPIP1Q96JH7 RNY4P29-201ENST00000410801 97 ntBASIC1.21□□□□□ -2.22
VCPIP1Q96JH7 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
VCPIP1Q96JH7 MIR4500-201ENST00000579472 76 ntBASIC1.21□□□□□ -2.22
VCPIP1Q96JH7 U6.109-201ENST00000636749 87 ntBASIC1.21□□□□□ -2.22
VCPIP1Q96JH7 RNA5SP133-201ENST00000363368 119 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 RNY1P2-201ENST00000364820 117 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 Y_RNA.388-201ENST00000383919 113 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 SNORA2B-201ENST00000384583 137 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 SNORA75.2-201ENST00000391138 150 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 SNORA75.3-201ENST00000391231 150 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 AC138749.4-201ENST00000563970 127 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 AC090897.1-201ENST00000580909 226 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 MIR151B-201ENST00000584249 96 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 AC062037.1-201ENST00000605302 128 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VCPIP1Q96JH7 MIR494-201ENST00000349529 81 ntBASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 MIR377-201ENST00000362145 69 ntBASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 Y_RNA.17-201ENST00000362433 111 ntBASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 SNORD58A-201ENST00000383875 65 ntBASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 MIR450A2-201ENST00000385022 100 ntBASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 MIR6779-201ENST00000617283 64 ntBASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 MIR6788-201ENST00000618842 66 ntBASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
VCPIP1Q96JH7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 RNU6-1244P-201ENST00000363614 108 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 Y_RNA.173-201ENST00000363776 113 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 RNU6-580P-201ENST00000365159 107 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 SNORA25-201ENST00000384384 134 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 MT-TF-201ENST00000387314 71 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 SNORD93-201ENST00000408813 74 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.18□□□□□ -2.22
VCPIP1Q96JH7 SNORD116-10-201ENST00000363791 102 ntBASIC1.17□□□□□ -2.22
VCPIP1Q96JH7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
VCPIP1Q96JH7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
VCPIP1Q96JH7 Y_RNA.593-201ENST00000410292 98 ntBASIC1.17□□□□□ -2.22
VCPIP1Q96JH7 snoU13.21-201ENST00000459368 105 ntBASIC1.17□□□□□ -2.22
VCPIP1Q96JH7 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
VCPIP1Q96JH7 HSBP1P2-201ENST00000299671 229 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 MIR598-201ENST00000384868 97 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 MIR222-201ENST00000384992 110 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 MIR181B2-201ENST00000385004 89 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 MIR548J-201ENST00000408833 112 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 MIR18B-201ENST00000454574 71 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 MIR4491-201ENST00000581087 68 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 IGLL4P-201ENST00000614590 133 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 AC027335.2-201ENST00000624030 375 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 MIR6767-201ENST00000637302 66 ntBASIC1.16□□□□□ -2.22
VCPIP1Q96JH7 AC023934.1-201ENST00000574529 2389 ntBASIC1.15□□□□□ -2.22
VCPIP1Q96JH7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 RNU6-403P-201ENST00000363163 104 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 RNA5SP325-201ENST00000363756 130 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 RNA5SP173-201ENST00000364857 136 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 RNU6-820P-201ENST00000384273 107 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 RNU6-480P-201ENST00000384332 107 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 SNORD116-22-201ENST00000384430 92 ntBASIC1.15□□□□□ -2.23
VCPIP1Q96JH7 SNORA72.6-201ENST00000384520 129 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms