Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 AC006254.2-201ENST00000603259 279 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 AC023934.1-201ENST00000574529 2389 ntBASIC1.25□□□□□ -2.21
PTCD3Q96EY7 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
PTCD3Q96EY7 Y_RNA.190-201ENST00000363964 101 ntBASIC1.24□□□□□ -2.21
PTCD3Q96EY7 RNU6-294P-201ENST00000364999 102 ntBASIC1.24□□□□□ -2.21
PTCD3Q96EY7 SNORD38.2-201ENST00000384470 69 ntBASIC1.24□□□□□ -2.21
PTCD3Q96EY7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.24□□□□□ -2.21
PTCD3Q96EY7 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
PTCD3Q96EY7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.24□□□□□ -2.21
PTCD3Q96EY7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
PTCD3Q96EY7 Y_RNA.220-201ENST00000364244 109 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 RNU6-972P-201ENST00000391208 107 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 RNU6-887P-201ENST00000410660 100 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 RPS26P5-201ENST00000418544 335 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 SNRPGP12-201ENST00000449481 213 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 RNU7-95P-201ENST00000459222 64 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 TRMT112P2-201ENST00000512910 132 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 RNU6-531P-201ENST00000516694 104 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 MIR4771-2-201ENST00000577758 74 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 MIR4771-1-201ENST00000582617 74 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 AC103810.7-201ENST00000607821 91 ntBASIC1.23□□□□□ -2.21
PTCD3Q96EY7 SNORD58A-201ENST00000383875 65 ntBASIC1.22□□□□□ -2.21
PTCD3Q96EY7 RNU4-83P-201ENST00000410863 133 ntBASIC1.22□□□□□ -2.21
PTCD3Q96EY7 BX276092.1-201ENST00000427368 251 ntBASIC1.22□□□□□ -2.21
PTCD3Q96EY7 MIR8066-201ENST00000617280 78 ntBASIC1.22□□□□□ -2.21
PTCD3Q96EY7 RNU6-403P-201ENST00000363163 104 ntBASIC1.21□□□□□ -2.22
PTCD3Q96EY7 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
PTCD3Q96EY7 MIR125B2-201ENST00000385128 89 ntBASIC1.21□□□□□ -2.22
PTCD3Q96EY7 SNORD12-201ENST00000391002 90 ntBASIC1.21□□□□□ -2.22
PTCD3Q96EY7 MIR1257-201ENST00000408490 117 ntBASIC1.21□□□□□ -2.22
PTCD3Q96EY7 RNU6-850P-201ENST00000516934 103 ntBASIC1.21□□□□□ -2.22
PTCD3Q96EY7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
PTCD3Q96EY7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.2□□□□□ -2.22
PTCD3Q96EY7 Y_RNA.96-201ENST00000363092 109 ntBASIC1.2□□□□□ -2.22
PTCD3Q96EY7 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
PTCD3Q96EY7 MIR181B2-201ENST00000385004 89 ntBASIC1.2□□□□□ -2.22
PTCD3Q96EY7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.2□□□□□ -2.22
PTCD3Q96EY7 AC026421.1-201ENST00000519101 163 ntBASIC1.2□□□□□ -2.22
PTCD3Q96EY7 MIR4676-201ENST00000583078 72 ntBASIC1.2□□□□□ -2.22
PTCD3Q96EY7 MIR6082-201ENST00000613604 109 ntBASIC1.2□□□□□ -2.22
PTCD3Q96EY7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.19□□□□□ -2.22
PTCD3Q96EY7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PTCD3Q96EY7 SNORA72.6-201ENST00000384520 129 ntBASIC1.19□□□□□ -2.22
PTCD3Q96EY7 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
PTCD3Q96EY7 AC013244.2-201ENST00000603396 103 ntBASIC1.19□□□□□ -2.22
PTCD3Q96EY7 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
PTCD3Q96EY7 Y_RNA.42-201ENST00000362660 108 ntBASIC1.18□□□□□ -2.22
PTCD3Q96EY7 RNU4-58P-201ENST00000363192 141 ntBASIC1.18□□□□□ -2.22
PTCD3Q96EY7 SNORD73B-201ENST00000364394 72 ntBASIC1.18□□□□□ -2.22
PTCD3Q96EY7 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
PTCD3Q96EY7 RNU6-571P-201ENST00000384128 107 ntBASIC1.18□□□□□ -2.22
PTCD3Q96EY7 RNU7-156P-201ENST00000517214 74 ntBASIC1.18□□□□□ -2.22
PTCD3Q96EY7 AL513043.2-201ENST00000573941 143 ntBASIC1.18□□□□□ -2.22
PTCD3Q96EY7 AC025521.1-201ENST00000621624 286 ntBASIC1.18□□□□□ -2.22
PTCD3Q96EY7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PTCD3Q96EY7 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
PTCD3Q96EY7 MIR1287-201ENST00000408492 90 ntBASIC1.17□□□□□ -2.22
PTCD3Q96EY7 RNU6-762P-201ENST00000517107 102 ntBASIC1.17□□□□□ -2.22
PTCD3Q96EY7 MIR4804-201ENST00000581683 73 ntBASIC1.17□□□□□ -2.22
PTCD3Q96EY7 SNORD92-201ENST00000585078 85 ntBASIC1.17□□□□□ -2.22
PTCD3Q96EY7 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
PTCD3Q96EY7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.16□□□□□ -2.22
PTCD3Q96EY7 MIR222-201ENST00000384992 110 ntBASIC1.16□□□□□ -2.22
PTCD3Q96EY7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
PTCD3Q96EY7 RNU6-994P-201ENST00000410507 111 ntBASIC1.16□□□□□ -2.22
PTCD3Q96EY7 RNU7-56P-201ENST00000458744 62 ntBASIC1.16□□□□□ -2.22
PTCD3Q96EY7 RNU6-1194P-201ENST00000516208 104 ntBASIC1.16□□□□□ -2.22
PTCD3Q96EY7 RNU6-765P-201ENST00000516916 99 ntBASIC1.16□□□□□ -2.22
PTCD3Q96EY7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 SNORD116-10-201ENST00000363791 102 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 SNORA25.9-201ENST00000365087 128 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 RNU6-53P-201ENST00000365367 106 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 RNU6-480P-201ENST00000384332 107 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.558-201ENST00000384685 113 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 MIR499A-201ENST00000384903 122 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 RNU7-106P-201ENST00000459514 67 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 AC008608.1-201ENST00000603910 127 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 MIR8070-201ENST00000616510 88 ntBASIC1.15□□□□□ -2.23
PTCD3Q96EY7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.17-201ENST00000362433 111 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 RNU6-392P-201ENST00000364926 101 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 MIR516A2-201ENST00000384888 90 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 MIR516A1-201ENST00000385033 90 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 MIR938-201ENST00000401216 83 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 MIR1827-201ENST00000408549 66 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 SNORD100-201ENST00000408573 76 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.593-201ENST00000410292 98 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 RNU7-102P-201ENST00000458948 62 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
PTCD3Q96EY7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms