Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNU6-1108P-201ENST00000516308 104 ntBASIC1.67□□□□□ -2.14
CHFRQ96EP1 MIR4422-201ENST00000581938 83 ntBASIC1.67□□□□□ -2.14
CHFRQ96EP1 AP000753.3-201ENST00000604083 169 ntBASIC1.67□□□□□ -2.14
CHFRQ96EP1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHFRQ96EP1 RNU6-132P-201ENST00000383863 107 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 RNU6-203P-201ENST00000384038 104 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 RNU6-411P-201ENST00000384451 107 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 RNA5SP237-201ENST00000410414 113 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 RNA5SP100-201ENST00000410903 110 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 RNA5SP59-201ENST00000410922 110 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 BX276092.1-201ENST00000427368 251 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 RNU6-75P-201ENST00000515944 104 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.66□□□□□ -2.14
CHFRQ96EP1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
CHFRQ96EP1 AC008163.1-202ENST00000636004 2889 ntBASIC1.65□□□□□ -2.14
CHFRQ96EP1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CHFRQ96EP1 MIR337-201ENST00000362281 93 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 SNORD36A-201ENST00000362874 73 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 MIR563-201ENST00000385080 79 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 RNU6-360P-201ENST00000390944 104 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 MIR1323-201ENST00000408090 73 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 MIR1265-201ENST00000408444 86 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 MIR1302-7-201ENST00000408841 72 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 snoU13.2-201ENST00000459201 104 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.65□□□□□ -2.15
CHFRQ96EP1 RNU6-687P-201ENST00000516443 89 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 SNORA18.5-201ENST00000516616 101 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 MIR4484-201ENST00000582855 83 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
CHFRQ96EP1 U6.109-201ENST00000636749 87 ntBASIC1.65□□□□□ -2.15
CHFRQ96EP1 AL161722.3-201ENST00000605789 2983 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 Y_RNA.386-201ENST00000383913 105 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 RNU6-811P-201ENST00000384069 107 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 RNU6-571P-201ENST00000384128 107 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 MIR635-201ENST00000384830 98 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 SNORD90-201ENST00000391145 111 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 MIR6740-201ENST00000618268 113 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 MIR664A-201ENST00000626086 82 ntBASIC1.64□□□□□ -2.15
CHFRQ96EP1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.63□□□□□ -2.15
CHFRQ96EP1 Y_RNA.119-201ENST00000363301 96 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 MIR516A2-201ENST00000384888 90 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 MIR194-1-201ENST00000384892 85 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 MIR516A1-201ENST00000385033 90 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 FGF7P7-201ENST00000514120 227 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 SNORA31.17-201ENST00000516953 127 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 RNU6-448P-201ENST00000517052 107 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 MIR3064-201ENST00000581130 66 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 MIR7111-201ENST00000619751 72 ntBASIC1.63□□□□□ -2.15
CHFRQ96EP1 MIR30D-201ENST00000362283 70 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 SNORA72.6-201ENST00000384520 129 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 MIR588-201ENST00000384900 83 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 Y_RNA.660-201ENST00000516002 120 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 MIR4536-1-201ENST00000583537 88 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 MIR3192-201ENST00000584920 77 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 uc_338.6-201ENST00000613544 171 ntBASIC1.62□□□□□ -2.15
CHFRQ96EP1 Y_RNA.283-201ENST00000364798 112 ntBASIC1.61□□□□□ -2.15
CHFRQ96EP1 Y_RNA.340-201ENST00000365330 92 ntBASIC1.61□□□□□ -2.15
CHFRQ96EP1 AC004965.1-201ENST00000413033 213 ntBASIC1.61□□□□□ -2.15
CHFRQ96EP1 RNU6-634P-201ENST00000459134 106 ntBASIC1.61□□□□□ -2.15
CHFRQ96EP1 RNU7-106P-201ENST00000459514 67 ntBASIC1.61□□□□□ -2.15
CHFRQ96EP1 RNU6-70P-201ENST00000516438 60 ntBASIC1.61□□□□□ -2.15
CHFRQ96EP1 AC104996.3-201ENST00000590718 94 ntBASIC1.61□□□□□ -2.15
CHFRQ96EP1 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
CHFRQ96EP1 SNORD41-201ENST00000386967 70 ntBASIC1.6□□□□□ -2.15
CHFRQ96EP1 AC074348.1-201ENST00000426503 132 ntBASIC1.6□□□□□ -2.15
CHFRQ96EP1 snoU13.25-201ENST00000458945 104 ntBASIC1.6□□□□□ -2.15
CHFRQ96EP1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.6□□□□□ -2.15
CHFRQ96EP1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CHFRQ96EP1 MIRLET7F1-201ENST00000362202 87 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 SNORA25.9-201ENST00000365087 128 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 SNORD77.2-201ENST00000391045 68 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 RNU6-1254P-201ENST00000391266 104 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 RNU6-380P-201ENST00000410207 107 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 AC125388.1-201ENST00000459631 156 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 RNU6-871P-201ENST00000516122 100 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 SNORA4-201ENST00000584302 138 ntBASIC1.59□□□□□ -2.15
CHFRQ96EP1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
CHFRQ96EP1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
CHFRQ96EP1 RNU6-957P-201ENST00000363652 99 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 RNU6-392P-201ENST00000364926 101 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 Y_RNA.491-201ENST00000384417 107 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 RNU6-540P-201ENST00000384622 101 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 MIR499A-201ENST00000384903 122 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 AL161935.2-201ENST00000414627 60 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
CHFRQ96EP1 SNORD111.1-201ENST00000516421 86 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms