Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR3664-201ENST00000579074 99 ntBASIC2.42□□□□□ -2.02
HLA-CQ95604 MIR5007-201ENST00000583098 95 ntBASIC2.42□□□□□ -2.02
HLA-CQ95604 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-CQ95604 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.42□□□□□ -2.02
HLA-CQ95604 TRDV1-202ENST00000621643 102 ntBASIC2.42□□□□□ -2.02
HLA-CQ95604 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HLA-CQ95604 Y_RNA.12-201ENST00000362393 112 ntBASIC2.41□□□□□ -2.02
HLA-CQ95604 Y_RNA.42-201ENST00000362660 108 ntBASIC2.41□□□□□ -2.02
HLA-CQ95604 RNU6-587P-201ENST00000391282 106 ntBASIC2.41□□□□□ -2.02
HLA-CQ95604 RNU7-195P-201ENST00000458793 62 ntBASIC2.41□□□□□ -2.02
HLA-CQ95604 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
HLA-CQ95604 MIR4287-201ENST00000579398 78 ntBASIC2.41□□□□□ -2.02
HLA-CQ95604 MIR4446-201ENST00000578505 67 ntBASIC2.4□□□□□ -2.03
HLA-CQ95604 AC013244.2-201ENST00000603396 103 ntBASIC2.4□□□□□ -2.03
HLA-CQ95604 MTRNR2L2-201ENST00000604882 87 ntBASIC2.4□□□□□ -2.03
HLA-CQ95604 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
HLA-CQ95604 AC023934.1-201ENST00000574529 2389 ntBASIC2.39□□□□□ -2.03
HLA-CQ95604 RNU6-1051P-201ENST00000365471 102 ntBASIC2.39□□□□□ -2.03
HLA-CQ95604 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HLA-CQ95604 AC108667.1-201ENST00000428618 249 ntBASIC2.39□□□□□ -2.03
HLA-CQ95604 AC092628.1-201ENST00000436250 252 ntBASIC2.39□□□□□ -2.03
HLA-CQ95604 AC125388.1-201ENST00000459631 156 ntBASIC2.39□□□□□ -2.03
HLA-CQ95604 AC079140.2-201ENST00000506193 142 ntBASIC2.39□□□□□ -2.03
HLA-CQ95604 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-CQ95604 snoU13.31-201ENST00000607291 104 ntBASIC2.39□□□□□ -2.03
HLA-CQ95604 MIR8063-201ENST00000621930 81 ntBASIC2.39□□□□□ -2.03
HLA-CQ95604 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-CQ95604 Y_RNA.36-201ENST00000362602 112 ntBASIC2.38□□□□□ -2.03
HLA-CQ95604 RNU6-681P-201ENST00000364012 104 ntBASIC2.38□□□□□ -2.03
HLA-CQ95604 MIR499A-201ENST00000384903 122 ntBASIC2.38□□□□□ -2.03
HLA-CQ95604 MIR30A-201ENST00000385092 71 ntBASIC2.38□□□□□ -2.03
HLA-CQ95604 MIR942-201ENST00000401111 86 ntBASIC2.38□□□□□ -2.03
HLA-CQ95604 AC138907.6-201ENST00000568401 126 ntBASIC2.38□□□□□ -2.03
HLA-CQ95604 AC138869.1-201ENST00000568623 124 ntBASIC2.38□□□□□ -2.03
HLA-CQ95604 MIR4484-201ENST00000582855 83 ntBASIC2.38□□□□□ -2.03
HLA-CQ95604 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-CQ95604 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-CQ95604 AC080100.1-201ENST00000624239 5356 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 RNA5SP393-201ENST00000363423 117 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 SNORD113.3-201ENST00000364630 78 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 SNORD101-201ENST00000384027 73 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 MIR221-201ENST00000385135 110 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 RNA5SP95-201ENST00000410319 137 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 MIR4299-201ENST00000577899 72 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 AC103810.8-201ENST00000607347 118 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 FO624990.1-201ENST00000636373 85 ntBASIC2.37□□□□□ -2.03
HLA-CQ95604 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-CQ95604 AL161722.3-201ENST00000605789 2983 ntBASIC2.36□□□□□ -2.03
HLA-CQ95604 RNU6-664P-201ENST00000362381 107 ntBASIC2.36□□□□□ -2.03
HLA-CQ95604 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
HLA-CQ95604 SNORD1A-201ENST00000364968 72 ntBASIC2.36□□□□□ -2.03
HLA-CQ95604 RNU6-1054P-201ENST00000411293 104 ntBASIC2.36□□□□□ -2.03
HLA-CQ95604 MIR6845-201ENST00000613182 61 ntBASIC2.36□□□□□ -2.03
HLA-CQ95604 Y_RNA.13-201ENST00000362403 112 ntBASIC2.35□□□□□ -2.03
HLA-CQ95604 MIR5194-201ENST00000582634 120 ntBASIC2.35□□□□□ -2.03
HLA-CQ95604 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-CQ95604 MIR583-201ENST00000384846 75 ntBASIC2.34□□□□□ -2.03
HLA-CQ95604 MIR125B2-201ENST00000385128 89 ntBASIC2.34□□□□□ -2.03
HLA-CQ95604 Y_RNA.596-201ENST00000410462 109 ntBASIC2.34□□□□□ -2.03
HLA-CQ95604 RNU2-59P-201ENST00000410482 191 ntBASIC2.34□□□□□ -2.03
HLA-CQ95604 MIR4696-201ENST00000581431 70 ntBASIC2.34□□□□□ -2.03
HLA-CQ95604 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
HLA-CQ95604 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HLA-CQ95604 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HLA-CQ95604 MIR378A-201ENST00000362177 66 ntBASIC2.33□□□□□ -2.04
HLA-CQ95604 Y_RNA.207-201ENST00000364142 106 ntBASIC2.33□□□□□ -2.04
HLA-CQ95604 RNU6-649P-201ENST00000384463 107 ntBASIC2.33□□□□□ -2.04
HLA-CQ95604 MIR489-201ENST00000384923 84 ntBASIC2.33□□□□□ -2.04
HLA-CQ95604 Y_RNA.606-201ENST00000410579 103 ntBASIC2.33□□□□□ -2.04
HLA-CQ95604 MIR3198-2-201ENST00000577868 80 ntBASIC2.33□□□□□ -2.04
HLA-CQ95604 MIR6132-201ENST00000622083 109 ntBASIC2.33□□□□□ -2.04
HLA-CQ95604 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-CQ95604 RNU6-340P-201ENST00000364005 107 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 RNU6-934P-201ENST00000365154 107 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 DEFA7P-201ENST00000382676 285 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 SNORA8.1-201ENST00000384250 140 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 SNORD90-201ENST00000391145 111 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 RNU6-321P-201ENST00000410912 106 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 Y_RNA.697-201ENST00000516776 113 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 RNU6-165P-201ENST00000517170 99 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 MIR8070-201ENST00000616510 88 ntBASIC2.32□□□□□ -2.04
HLA-CQ95604 SNORD111-201ENST00000408139 94 ntBASIC2.31□□□□□ -2.04
HLA-CQ95604 RNU6-935P-201ENST00000410371 100 ntBASIC2.31□□□□□ -2.04
HLA-CQ95604 MIR3937-201ENST00000580135 106 ntBASIC2.31□□□□□ -2.04
HLA-CQ95604 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.31□□□□□ -2.04
HLA-CQ95604 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-CQ95604 RNU6-1241P-201ENST00000384536 107 ntBASIC2.3□□□□□ -2.04
HLA-CQ95604 AL606490.4-201ENST00000423117 127 ntBASIC2.3□□□□□ -2.04
HLA-CQ95604 snoU13.17-201ENST00000458802 104 ntBASIC2.3□□□□□ -2.04
HLA-CQ95604 RNU6-1265P-201ENST00000516342 103 ntBASIC2.3□□□□□ -2.04
HLA-CQ95604 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
HLA-CQ95604 U6.100-201ENST00000636230 99 ntBASIC2.3□□□□□ -2.04
HLA-CQ95604 Y_RNA.340-201ENST00000365330 92 ntBASIC2.29□□□□□ -2.04
HLA-CQ95604 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-CQ95604 RNU6-291P-201ENST00000384720 107 ntBASIC2.29□□□□□ -2.04
HLA-CQ95604 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
HLA-CQ95604 MIR599-201ENST00000385069 95 ntBASIC2.29□□□□□ -2.04
HLA-CQ95604 MIR154-201ENST00000385243 84 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 222.1 ms