Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.51□□□□□ -2.17
SHCBP1Q8NEM2 U6.109-201ENST00000636749 87 ntBASIC1.51□□□□□ -2.17
SHCBP1Q8NEM2 HSBP1P2-201ENST00000299671 229 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 Y_RNA.17-201ENST00000362433 111 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 MIR450A2-201ENST00000385022 100 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 MT-TF-201ENST00000387314 71 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 MTND5P40-201ENST00000559945 246 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 AC090897.1-201ENST00000580909 226 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 AC020891.4-201ENST00000605745 93 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 RMST_2.1-201ENST00000617263 136 ntBASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SHCBP1Q8NEM2 SNORD116-10-201ENST00000363791 102 ntBASIC1.49□□□□□ -2.17
SHCBP1Q8NEM2 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
SHCBP1Q8NEM2 RN7SKP12-201ENST00000516275 143 ntBASIC1.49□□□□□ -2.17
SHCBP1Q8NEM2 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
SHCBP1Q8NEM2 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
SHCBP1Q8NEM2 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
SHCBP1Q8NEM2 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
SHCBP1Q8NEM2 MIR494-201ENST00000349529 81 ntBASIC1.48□□□□□ -2.17
SHCBP1Q8NEM2 MIR96-201ENST00000362288 78 ntBASIC1.48□□□□□ -2.17
SHCBP1Q8NEM2 RNA5SP133-201ENST00000363368 119 ntBASIC1.48□□□□□ -2.17
SHCBP1Q8NEM2 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
SHCBP1Q8NEM2 snoU13.21-201ENST00000459368 105 ntBASIC1.48□□□□□ -2.17
SHCBP1Q8NEM2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.48□□□□□ -2.17
SHCBP1Q8NEM2 RNA5SP480-201ENST00000516840 109 ntBASIC1.48□□□□□ -2.17
SHCBP1Q8NEM2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 SNORA2B-201ENST00000384583 137 ntBASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 SNORA75.2-201ENST00000391138 150 ntBASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 SNORA75.3-201ENST00000391231 150 ntBASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 SNORA31.2-201ENST00000516019 134 ntBASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 MIR4500-201ENST00000579472 76 ntBASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.47□□□□□ -2.17
SHCBP1Q8NEM2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
SHCBP1Q8NEM2 Y_RNA.119-201ENST00000363301 96 ntBASIC1.46□□□□□ -2.18
SHCBP1Q8NEM2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.46□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-820P-201ENST00000384273 107 ntBASIC1.46□□□□□ -2.18
SHCBP1Q8NEM2 MIR18B-201ENST00000454574 71 ntBASIC1.46□□□□□ -2.18
SHCBP1Q8NEM2 AC008163.1-202ENST00000636004 2889 ntBASIC1.46□□□□□ -2.18
SHCBP1Q8NEM2 RNA5SP173-201ENST00000364857 136 ntBASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 MIR181B2-201ENST00000385004 89 ntBASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-402P-201ENST00000410678 103 ntBASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-592P-201ENST00000411333 103 ntBASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 SNRPGP12-201ENST00000449481 213 ntBASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 MIR4491-201ENST00000581087 68 ntBASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 AC025521.1-201ENST00000621624 286 ntBASIC1.45□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-675P-201ENST00000384236 104 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 SNORD116-22-201ENST00000384430 92 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 MIR758-201ENST00000390227 88 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 Y_RNA.588-201ENST00000391254 102 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 SNORD93-201ENST00000408813 74 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 RNU4-83P-201ENST00000410863 133 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 AC036111.3-201ENST00000526389 112 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 AL513043.2-201ENST00000573941 143 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
SHCBP1Q8NEM2 SNORD113.3-201ENST00000364630 78 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-219P-201ENST00000364728 107 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 RNU1-36P-201ENST00000365130 165 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-1152P-201ENST00000384576 107 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 SNORD83.1-201ENST00000411362 77 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 BX276092.1-201ENST00000427368 251 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-267P-201ENST00000516714 103 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 SNORA25.16-201ENST00000516741 121 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-850P-201ENST00000516934 103 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
SHCBP1Q8NEM2 Y_RNA.73-201ENST00000362910 113 ntBASIC1.42□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-1125P-201ENST00000363601 107 ntBASIC1.42□□□□□ -2.18
SHCBP1Q8NEM2 RNU1-93P-201ENST00000364704 169 ntBASIC1.42□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-480P-201ENST00000384332 107 ntBASIC1.42□□□□□ -2.18
SHCBP1Q8NEM2 RNU7-185P-201ENST00000459215 60 ntBASIC1.42□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-531P-201ENST00000516694 104 ntBASIC1.42□□□□□ -2.18
SHCBP1Q8NEM2 MIR4668-201ENST00000582284 70 ntBASIC1.42□□□□□ -2.18
SHCBP1Q8NEM2 AC023934.1-201ENST00000574529 2389 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 RNY1P1-201ENST00000364372 112 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-573P-201ENST00000383938 106 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-571P-201ENST00000384128 107 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 RNY1P4-201ENST00000384595 115 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 Y_RNA.620-201ENST00000411009 88 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 AC015818.7-201ENST00000428754 109 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 AC087499.7-201ENST00000441958 109 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 IGLL4P-201ENST00000614590 133 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SHCBP1Q8NEM2 RNU6-403P-201ENST00000363163 104 ntBASIC1.4□□□□□ -2.19
SHCBP1Q8NEM2 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
SHCBP1Q8NEM2 RNU6-910P-201ENST00000390844 107 ntBASIC1.4□□□□□ -2.19
SHCBP1Q8NEM2 Y_RNA.609-201ENST00000410669 89 ntBASIC1.4□□□□□ -2.19
SHCBP1Q8NEM2 AC022137.1-201ENST00000483735 151 ntBASIC1.4□□□□□ -2.19
SHCBP1Q8NEM2 AC023827.1-201ENST00000569247 97 ntBASIC1.4□□□□□ -2.19
SHCBP1Q8NEM2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SHCBP1Q8NEM2 SNORD114-27-201ENST00000363766 70 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 251.3 ms