Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNU6-850P-201ENST00000516934 103 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 RNU7-156P-201ENST00000517214 74 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 SNORD92-201ENST00000585078 85 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 AC013244.2-201ENST00000603396 103 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 AC103810.7-201ENST00000607821 91 ntBASIC1.3□□□□□ -2.2
HIPK4Q8NE63 Y_RNA.96-201ENST00000363092 109 ntBASIC1.29□□□□□ -2.2
HIPK4Q8NE63 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
HIPK4Q8NE63 RNY1P7-201ENST00000384743 110 ntBASIC1.29□□□□□ -2.2
HIPK4Q8NE63 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
HIPK4Q8NE63 RNU6-972P-201ENST00000391208 107 ntBASIC1.29□□□□□ -2.2
HIPK4Q8NE63 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.29□□□□□ -2.2
HIPK4Q8NE63 MIR938-201ENST00000401216 83 ntBASIC1.29□□□□□ -2.2
HIPK4Q8NE63 RNU6-765P-201ENST00000516916 99 ntBASIC1.29□□□□□ -2.2
HIPK4Q8NE63 MIR1-1-201ENST00000362147 71 ntBASIC1.28□□□□□ -2.2
HIPK4Q8NE63 MIR100-201ENST00000385259 80 ntBASIC1.28□□□□□ -2.2
HIPK4Q8NE63 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.28□□□□□ -2.2
HIPK4Q8NE63 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
HIPK4Q8NE63 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
HIPK4Q8NE63 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.28□□□□□ -2.2
HIPK4Q8NE63 AC067940.1-201ENST00000458411 300 ntBASIC1.27□□□□□ -2.21
HIPK4Q8NE63 RNU7-56P-201ENST00000458744 62 ntBASIC1.27□□□□□ -2.21
HIPK4Q8NE63 RNU7-102P-201ENST00000458948 62 ntBASIC1.27□□□□□ -2.21
HIPK4Q8NE63 RNU6-977P-201ENST00000516411 103 ntBASIC1.27□□□□□ -2.21
HIPK4Q8NE63 AC008608.1-201ENST00000603910 127 ntBASIC1.27□□□□□ -2.21
HIPK4Q8NE63 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HIPK4Q8NE63 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
HIPK4Q8NE63 RNA5SP99-201ENST00000364020 114 ntBASIC1.26□□□□□ -2.21
HIPK4Q8NE63 Y_RNA.220-201ENST00000364244 109 ntBASIC1.26□□□□□ -2.21
HIPK4Q8NE63 RNU6-364P-201ENST00000384387 107 ntBASIC1.26□□□□□ -2.21
HIPK4Q8NE63 MIR181B2-201ENST00000385004 89 ntBASIC1.26□□□□□ -2.21
HIPK4Q8NE63 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
HIPK4Q8NE63 SNORD100-201ENST00000408573 76 ntBASIC1.26□□□□□ -2.21
HIPK4Q8NE63 SNORD124-201ENST00000459577 104 ntBASIC1.26□□□□□ -2.21
HIPK4Q8NE63 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.26□□□□□ -2.21
HIPK4Q8NE63 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HIPK4Q8NE63 RNU1-124P-201ENST00000363861 145 ntBASIC1.25□□□□□ -2.21
HIPK4Q8NE63 SNORD58A-201ENST00000383875 65 ntBASIC1.25□□□□□ -2.21
HIPK4Q8NE63 RNU6-482P-201ENST00000391068 107 ntBASIC1.25□□□□□ -2.21
HIPK4Q8NE63 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
HIPK4Q8NE63 AL512598.1-201ENST00000610158 273 ntBASIC1.25□□□□□ -2.21
HIPK4Q8NE63 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
HIPK4Q8NE63 RMST_2.1-201ENST00000617263 136 ntBASIC1.25□□□□□ -2.21
HIPK4Q8NE63 AC025521.1-201ENST00000621624 286 ntBASIC1.25□□□□□ -2.21
HIPK4Q8NE63 Y_RNA.57-201ENST00000362806 113 ntBASIC1.24□□□□□ -2.21
HIPK4Q8NE63 RNU6-1125P-201ENST00000363601 107 ntBASIC1.24□□□□□ -2.21
HIPK4Q8NE63 RNU6-480P-201ENST00000384332 107 ntBASIC1.24□□□□□ -2.21
HIPK4Q8NE63 MIR520F-201ENST00000384824 87 ntBASIC1.24□□□□□ -2.21
HIPK4Q8NE63 RNU6-844P-201ENST00000517175 102 ntBASIC1.24□□□□□ -2.21
HIPK4Q8NE63 MIR4303-201ENST00000581299 66 ntBASIC1.24□□□□□ -2.21
HIPK4Q8NE63 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
HIPK4Q8NE63 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HIPK4Q8NE63 MIR101-2-201ENST00000362195 79 ntBASIC1.23□□□□□ -2.21
HIPK4Q8NE63 Y_RNA.190-201ENST00000363964 101 ntBASIC1.23□□□□□ -2.21
HIPK4Q8NE63 AL513043.2-201ENST00000573941 143 ntBASIC1.23□□□□□ -2.21
HIPK4Q8NE63 Y_RNA.56-201ENST00000362798 112 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 SNORD116-10-201ENST00000363791 102 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 MIR200A-201ENST00000384875 90 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 RNU1-119P-201ENST00000391122 165 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 FABP5P4-201ENST00000437203 171 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 RNU6-1110P-201ENST00000516462 101 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 Y_RNA.697-201ENST00000516776 113 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
HIPK4Q8NE63 RNU6-294P-201ENST00000364999 102 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 Y_RNA.536-201ENST00000384621 113 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 RNU6-291P-201ENST00000384720 107 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 MIR516A2-201ENST00000384888 90 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 MIR516A1-201ENST00000385033 90 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 SNORD89-201ENST00000390981 114 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 SNORD63B-201ENST00000411005 70 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 U7.7-201ENST00000459276 60 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 RNU7-106P-201ENST00000459514 67 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 TRAJ51-201ENST00000504127 63 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 RNU6-448P-201ENST00000517052 107 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 AP003327.1-201ENST00000529684 127 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 AC006254.2-201ENST00000603259 279 ntBASIC1.21□□□□□ -2.22
HIPK4Q8NE63 MIR942-201ENST00000401111 86 ntBASIC1.2□□□□□ -2.22
HIPK4Q8NE63 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
HIPK4Q8NE63 AC108667.1-201ENST00000428618 249 ntBASIC1.2□□□□□ -2.22
HIPK4Q8NE63 AC026421.1-201ENST00000519101 163 ntBASIC1.2□□□□□ -2.22
HIPK4Q8NE63 MIR548H5-201ENST00000580314 60 ntBASIC1.2□□□□□ -2.22
HIPK4Q8NE63 AL359821.1-201ENST00000605519 182 ntBASIC1.2□□□□□ -2.22
HIPK4Q8NE63 MIR520H-201ENST00000385126 88 ntBASIC1.19□□□□□ -2.22
HIPK4Q8NE63 SNORA17.3-201ENST00000391159 129 ntBASIC1.19□□□□□ -2.22
HIPK4Q8NE63 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
HIPK4Q8NE63 AC092628.1-201ENST00000436250 252 ntBASIC1.19□□□□□ -2.22
HIPK4Q8NE63 MIR4769-201ENST00000584126 77 ntBASIC1.19□□□□□ -2.22
HIPK4Q8NE63 MIR4679-1-201ENST00000637619 75 ntBASIC1.19□□□□□ -2.22
HIPK4Q8NE63 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
HIPK4Q8NE63 SNORD36A-201ENST00000362874 73 ntBASIC1.18□□□□□ -2.22
HIPK4Q8NE63 RNU6-1335P-201ENST00000365426 107 ntBASIC1.18□□□□□ -2.22
HIPK4Q8NE63 MIR635-201ENST00000384830 98 ntBASIC1.18□□□□□ -2.22
HIPK4Q8NE63 MIR519A1-201ENST00000385257 85 ntBASIC1.18□□□□□ -2.22
HIPK4Q8NE63 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
HIPK4Q8NE63 RNU7-10P-201ENST00000607194 63 ntBASIC1.18□□□□□ -2.22
HIPK4Q8NE63 AL136317.1-201ENST00000612653 226 ntBASIC1.18□□□□□ -2.22
HIPK4Q8NE63 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HIPK4Q8NE63 MIR378A-201ENST00000362177 66 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 RNA5SP245-201ENST00000364239 121 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 236.8 ms