Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC33Q8N5R6 MIR3678-201ENST00000578455 94 ntBASIC0.69□□□□□ -2.3
CCDC33Q8N5R6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CCDC33Q8N5R6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CCDC33Q8N5R6 RNU6-865P-201ENST00000364772 107 ntBASIC0.68□□□□□ -2.3
CCDC33Q8N5R6 AC018659.1-201ENST00000551083 169 ntBASIC0.68□□□□□ -2.3
CCDC33Q8N5R6 MIR1255B1-201ENST00000636325 63 ntBASIC0.68□□□□□ -2.3
CCDC33Q8N5R6 MIR3914-2-201ENST00000637339 95 ntBASIC0.68□□□□□ -2.3
CCDC33Q8N5R6 Y_RNA.71-201ENST00000362892 104 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 RNY4P6-201ENST00000363667 96 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 MIR193B-201ENST00000384907 83 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 SUMO1P3-201ENST00000439961 304 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 RNU6-469P-201ENST00000516253 101 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 RNU6-659P-201ENST00000516454 104 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 RNU6-521P-201ENST00000516663 105 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 RNU6-135P-201ENST00000516769 101 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 RNA5SP94-201ENST00000516917 108 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 MIR376B-201ENST00000614515 100 ntBASIC0.67□□□□□ -2.3
CCDC33Q8N5R6 MIR101-2-201ENST00000362195 79 ntBASIC0.66□□□□□ -2.3
CCDC33Q8N5R6 Y_RNA.56-201ENST00000362798 112 ntBASIC0.66□□□□□ -2.3
CCDC33Q8N5R6 Y_RNA.525-201ENST00000384570 113 ntBASIC0.66□□□□□ -2.3
CCDC33Q8N5R6 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
CCDC33Q8N5R6 RNA5SP347-201ENST00000362445 119 ntBASIC0.65□□□□□ -2.31
CCDC33Q8N5R6 SNORD18A-201ENST00000363753 72 ntBASIC0.65□□□□□ -2.31
CCDC33Q8N5R6 Y_RNA.344-201ENST00000365381 112 ntBASIC0.65□□□□□ -2.31
CCDC33Q8N5R6 MIR644A-201ENST00000385262 94 ntBASIC0.65□□□□□ -2.31
CCDC33Q8N5R6 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
CCDC33Q8N5R6 SNORD114-23-201ENST00000363536 72 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 SNORD116-14-201ENST00000383894 92 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 SNORD116-17-201ENST00000383929 92 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 SNORD116-15-201ENST00000384445 92 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 SNORD116-19-201ENST00000384729 92 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 TMSB4XP3-201ENST00000445144 114 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 RN7SKP12-201ENST00000516275 143 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
CCDC33Q8N5R6 RNU4-67P-201ENST00000364569 141 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 RNU6-81P-201ENST00000365608 104 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 MIR34C-201ENST00000384831 77 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 RNU6-679P-201ENST00000391003 106 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 MIR1273G-201ENST00000577677 100 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 MIR4500-201ENST00000579472 76 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 AC092634.7-201ENST00000621022 103 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 U6.95-201ENST00000636931 70 ntBASIC0.63□□□□□ -2.31
CCDC33Q8N5R6 RNU6-363P-201ENST00000362895 105 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 RNA5SP245-201ENST00000364239 121 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 Y_RNA.360-201ENST00000365512 102 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 RNU6-959P-201ENST00000384671 107 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 MIR548H5-201ENST00000580314 60 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 AC243829.3-201ENST00000622177 108 ntBASIC0.62□□□□□ -2.31
CCDC33Q8N5R6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC33Q8N5R6 SNORA63.5-201ENST00000363548 123 ntBASIC0.61□□□□□ -2.31
CCDC33Q8N5R6 RNA5SP517-201ENST00000364724 117 ntBASIC0.61□□□□□ -2.31
CCDC33Q8N5R6 Y_RNA.362-201ENST00000365518 110 ntBASIC0.61□□□□□ -2.31
CCDC33Q8N5R6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.61□□□□□ -2.31
CCDC33Q8N5R6 MIR4679-2-201ENST00000578358 77 ntBASIC0.61□□□□□ -2.31
CCDC33Q8N5R6 RNU7-10P-201ENST00000607194 63 ntBASIC0.61□□□□□ -2.31
CCDC33Q8N5R6 SNORA36.1-201ENST00000363424 132 ntBASIC0.6□□□□□ -2.31
CCDC33Q8N5R6 AL603908.1-201ENST00000406098 201 ntBASIC0.6□□□□□ -2.31
CCDC33Q8N5R6 MIR548I2-201ENST00000408348 149 ntBASIC0.6□□□□□ -2.31
CCDC33Q8N5R6 AC244505.6-201ENST00000452829 130 ntBASIC0.6□□□□□ -2.31
CCDC33Q8N5R6 SNORD33.1-201ENST00000516213 88 ntBASIC0.6□□□□□ -2.31
CCDC33Q8N5R6 MIR4639-201ENST00000584938 69 ntBASIC0.6□□□□□ -2.31
CCDC33Q8N5R6 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
CCDC33Q8N5R6 RNU6-1313P-201ENST00000362622 102 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 SNORA8.2-201ENST00000384372 139 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 SNORD28-201ENST00000384706 75 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 SNORA7.5-201ENST00000410672 110 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 AL353813.1-201ENST00000440700 253 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 RNA5SP47-201ENST00000517230 109 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 AC138869.1-201ENST00000568623 124 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 AL162726.3-218ENST00000636401 95 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 AC010487.4-201ENST00000637027 61 ntBASIC0.59□□□□□ -2.31
CCDC33Q8N5R6 Y_RNA.85-201ENST00000363014 111 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 Y_RNA.507-201ENST00000384500 99 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 BX276092.1-201ENST00000427368 251 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 SNRPGP12-201ENST00000449481 213 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 Y_RNA.649-201ENST00000459077 103 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 RPL39P34-201ENST00000477141 156 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 RNU6-1018P-201ENST00000516577 106 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 MIR6828-201ENST00000636181 60 ntBASIC0.58□□□□□ -2.32
CCDC33Q8N5R6 RNU6-409P-201ENST00000384114 104 ntBASIC0.57□□□□□ -2.32
CCDC33Q8N5R6 RNU6-571P-201ENST00000384128 107 ntBASIC0.57□□□□□ -2.32
CCDC33Q8N5R6 Y_RNA.563-201ENST00000384707 108 ntBASIC0.57□□□□□ -2.32
CCDC33Q8N5R6 RNU6-816P-201ENST00000390914 107 ntBASIC0.57□□□□□ -2.32
CCDC33Q8N5R6 RNU6-1268P-201ENST00000391214 107 ntBASIC0.57□□□□□ -2.32
CCDC33Q8N5R6 RNU6-1239P-201ENST00000391310 107 ntBASIC0.57□□□□□ -2.32
CCDC33Q8N5R6 SNORA40.8-201ENST00000411034 126 ntBASIC0.57□□□□□ -2.32
CCDC33Q8N5R6 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms