Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MTRNR2L2-201ENST00000604882 87 ntBASIC2.45□□□□□ -2.02
NPAS3Q8IXF0 RNU7-10P-201ENST00000607194 63 ntBASIC2.45□□□□□ -2.02
NPAS3Q8IXF0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NPAS3Q8IXF0 SNORD114-1-201ENST00000362705 72 ntBASIC2.44□□□□□ -2.02
NPAS3Q8IXF0 RNU1-36P-201ENST00000365130 165 ntBASIC2.44□□□□□ -2.02
NPAS3Q8IXF0 SNORA75.1-201ENST00000391130 148 ntBASIC2.44□□□□□ -2.02
NPAS3Q8IXF0 MIR1283-2-201ENST00000408621 87 ntBASIC2.44□□□□□ -2.02
NPAS3Q8IXF0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.44□□□□□ -2.02
NPAS3Q8IXF0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 Y_RNA.379-201ENST00000365653 102 ntBASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 MIR519A1-201ENST00000385257 85 ntBASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 RNA5SP95-201ENST00000410319 137 ntBASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 MIR548AD-201ENST00000584780 82 ntBASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 MIR6873-201ENST00000622788 63 ntBASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 AP006437.1-201ENST00000641440 3685 ntBASIC2.43□□□□□ -2.02
NPAS3Q8IXF0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 RNU6-753P-201ENST00000363926 107 ntBASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 MIR599-201ENST00000385069 95 ntBASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 RNA5SP501-201ENST00000410990 112 ntBASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 AL591806.2-201ENST00000433122 173 ntBASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 MIR5007-201ENST00000583098 95 ntBASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 MIR548V-201ENST00000584165 80 ntBASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 MIR6509-201ENST00000614603 85 ntBASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 Z82195.2-201ENST00000612348 18351 ntBASIC2.42□□□□□ -2.02
NPAS3Q8IXF0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 Y_RNA.13-201ENST00000362403 112 ntBASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 Y_RNA.56-201ENST00000362798 112 ntBASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 RNU6-645P-201ENST00000364649 106 ntBASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 RNU6-203P-201ENST00000384038 104 ntBASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 SNORA48.1-201ENST00000390879 135 ntBASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 RNU6-122P-201ENST00000516818 107 ntBASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 NAMPTP3-201ENST00000569273 224 ntBASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
NPAS3Q8IXF0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.4□□□□□ -2.02
NPAS3Q8IXF0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.03
NPAS3Q8IXF0 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
NPAS3Q8IXF0 RNU7-26P-201ENST00000458980 63 ntBASIC2.4□□□□□ -2.03
NPAS3Q8IXF0 RPL30P7-201ENST00000479312 323 ntBASIC2.4□□□□□ -2.03
NPAS3Q8IXF0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.4□□□□□ -2.03
NPAS3Q8IXF0 RNU6-922P-201ENST00000516753 99 ntBASIC2.4□□□□□ -2.03
NPAS3Q8IXF0 AC015712.3-201ENST00000559380 164 ntBASIC2.4□□□□□ -2.03
NPAS3Q8IXF0 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
NPAS3Q8IXF0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NPAS3Q8IXF0 RNU6-1039P-201ENST00000383931 107 ntBASIC2.39□□□□□ -2.03
NPAS3Q8IXF0 AC097635.1-201ENST00000450678 155 ntBASIC2.39□□□□□ -2.03
NPAS3Q8IXF0 AC108210.2-201ENST00000503681 201 ntBASIC2.39□□□□□ -2.03
NPAS3Q8IXF0 MIR3616-201ENST00000584070 92 ntBASIC2.39□□□□□ -2.03
NPAS3Q8IXF0 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
NPAS3Q8IXF0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NPAS3Q8IXF0 RNA5SP259-201ENST00000365541 109 ntBASIC2.38□□□□□ -2.03
NPAS3Q8IXF0 RNU6-287P-201ENST00000516230 98 ntBASIC2.38□□□□□ -2.03
NPAS3Q8IXF0 RNU6-92P-201ENST00000605893 104 ntBASIC2.38□□□□□ -2.03
NPAS3Q8IXF0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.38□□□□□ -2.03
NPAS3Q8IXF0 AC073869.9-201ENST00000641610 120 ntBASIC2.38□□□□□ -2.03
NPAS3Q8IXF0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPAS3Q8IXF0 SNORA64-201ENST00000384674 134 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 MIR653-201ENST00000385279 96 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 RPL23AP42-201ENST00000471152 471 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 RNU6-947P-201ENST00000516264 106 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 MIR2115-201ENST00000516657 100 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 MIR514B-201ENST00000516774 80 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 AC103810.8-201ENST00000607347 118 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 MAPK10-266ENST00000641066 6555 ntBASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
NPAS3Q8IXF0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 RNU1-148P-201ENST00000384472 162 ntBASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 SNORD41-201ENST00000386967 70 ntBASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 SNORD75.2-201ENST00000408784 58 ntBASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 AL049779.4-201ENST00000604500 156 ntBASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 MIR6082-201ENST00000613604 109 ntBASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 MIR6516-201ENST00000630554 81 ntBASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
NPAS3Q8IXF0 SNORD60.1-201ENST00000362451 73 ntBASIC2.35□□□□□ -2.03
NPAS3Q8IXF0 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
NPAS3Q8IXF0 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
NPAS3Q8IXF0 RN7SL274P-201ENST00000492268 272 ntBASIC2.35□□□□□ -2.03
NPAS3Q8IXF0 Y_RNA.676-201ENST00000516393 96 ntBASIC2.35□□□□□ -2.03
NPAS3Q8IXF0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NPAS3Q8IXF0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NPAS3Q8IXF0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 RNA5SP99-201ENST00000364020 114 ntBASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 RNU6-482P-201ENST00000391068 107 ntBASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 RNA5SP465-201ENST00000391195 109 ntBASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 U3.27-201ENST00000391237 200 ntBASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 RNU6-1265P-201ENST00000516342 103 ntBASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 SNORA31.17-201ENST00000516953 127 ntBASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NPAS3Q8IXF0 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms