Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 Y_RNA.205-201ENST00000364128 113 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 MIR30A-201ENST00000385092 71 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RNF135Q8IUD6 MIR1185-1-201ENST00000408598 86 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 Y_RNA.596-201ENST00000410462 109 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 RNU2-59P-201ENST00000410482 191 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 MIR3937-201ENST00000580135 106 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 SNRPGP19-201ENST00000603826 189 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RNF135Q8IUD6 MIR377-201ENST00000362145 69 ntBASIC2.35□□□□□ -2.03
RNF135Q8IUD6 RNA5SP264-201ENST00000363115 107 ntBASIC2.35□□□□□ -2.03
RNF135Q8IUD6 RNU6-540P-201ENST00000384622 101 ntBASIC2.35□□□□□ -2.03
RNF135Q8IUD6 SNORD90-201ENST00000391145 111 ntBASIC2.35□□□□□ -2.03
RNF135Q8IUD6 SNORD30.1-201ENST00000391309 70 ntBASIC2.35□□□□□ -2.03
RNF135Q8IUD6 AC245517.4-201ENST00000448601 281 ntBASIC2.35□□□□□ -2.03
RNF135Q8IUD6 RPL30P7-201ENST00000479312 323 ntBASIC2.35□□□□□ -2.03
RNF135Q8IUD6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNF135Q8IUD6 MT-TF-201ENST00000387314 71 ntBASIC2.34□□□□□ -2.03
RNF135Q8IUD6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RNF135Q8IUD6 AC108667.1-201ENST00000428618 249 ntBASIC2.34□□□□□ -2.03
RNF135Q8IUD6 RNU7-106P-201ENST00000459514 67 ntBASIC2.34□□□□□ -2.03
RNF135Q8IUD6 AC079140.2-201ENST00000506193 142 ntBASIC2.34□□□□□ -2.03
RNF135Q8IUD6 AL359851.1-201ENST00000569460 4997 ntBASIC2.33□□□□□ -2.04
RNF135Q8IUD6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF135Q8IUD6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RNF135Q8IUD6 Y_RNA.12-201ENST00000362393 112 ntBASIC2.33□□□□□ -2.04
RNF135Q8IUD6 SNORD1A-201ENST00000364968 72 ntBASIC2.33□□□□□ -2.04
RNF135Q8IUD6 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
RNF135Q8IUD6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.33□□□□□ -2.04
RNF135Q8IUD6 AL627230.6-201ENST00000611129 280 ntBASIC2.33□□□□□ -2.04
RNF135Q8IUD6 MIR6845-201ENST00000613182 61 ntBASIC2.33□□□□□ -2.04
RNF135Q8IUD6 uc_338.6-201ENST00000613544 171 ntBASIC2.33□□□□□ -2.04
RNF135Q8IUD6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF135Q8IUD6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF135Q8IUD6 RNU6-957P-201ENST00000363652 99 ntBASIC2.32□□□□□ -2.04
RNF135Q8IUD6 RNU6-800P-201ENST00000384473 103 ntBASIC2.32□□□□□ -2.04
RNF135Q8IUD6 RNU6-1065P-201ENST00000384513 106 ntBASIC2.32□□□□□ -2.04
RNF135Q8IUD6 RNU6-1241P-201ENST00000384536 107 ntBASIC2.32□□□□□ -2.04
RNF135Q8IUD6 MIR518E-201ENST00000385252 88 ntBASIC2.32□□□□□ -2.04
RNF135Q8IUD6 snoU13.31-201ENST00000607291 104 ntBASIC2.32□□□□□ -2.04
RNF135Q8IUD6 U6.111-201ENST00000636093 83 ntBASIC2.32□□□□□ -2.04
RNF135Q8IUD6 SNORD33-201ENST00000362761 85 ntBASIC2.31□□□□□ -2.04
RNF135Q8IUD6 RNU6-654P-201ENST00000364373 107 ntBASIC2.31□□□□□ -2.04
RNF135Q8IUD6 YWHAEP2-201ENST00000580066 112 ntBASIC2.31□□□□□ -2.04
RNF135Q8IUD6 YWHAEP3-201ENST00000582767 121 ntBASIC2.31□□□□□ -2.04
RNF135Q8IUD6 MIR337-201ENST00000362281 93 ntBASIC2.3□□□□□ -2.04
RNF135Q8IUD6 MIR154-201ENST00000385243 84 ntBASIC2.3□□□□□ -2.04
RNF135Q8IUD6 SNORD63B-201ENST00000411005 70 ntBASIC2.3□□□□□ -2.04
RNF135Q8IUD6 RNU6-531P-201ENST00000516694 104 ntBASIC2.3□□□□□ -2.04
RNF135Q8IUD6 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.3□□□□□ -2.04
RNF135Q8IUD6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RNF135Q8IUD6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF135Q8IUD6 SNORD115-31-201ENST00000365318 82 ntBASIC2.29□□□□□ -2.04
RNF135Q8IUD6 MIR499A-201ENST00000384903 122 ntBASIC2.29□□□□□ -2.04
RNF135Q8IUD6 RNA5SP95-201ENST00000410319 137 ntBASIC2.29□□□□□ -2.04
RNF135Q8IUD6 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
RNF135Q8IUD6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF135Q8IUD6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
RNF135Q8IUD6 MIRLET7G-201ENST00000362280 84 ntBASIC2.28□□□□□ -2.04
RNF135Q8IUD6 RNU6-580P-201ENST00000365159 107 ntBASIC2.28□□□□□ -2.04
RNF135Q8IUD6 SNORA8.1-201ENST00000384250 140 ntBASIC2.28□□□□□ -2.04
RNF135Q8IUD6 RNU6-663P-201ENST00000391105 106 ntBASIC2.28□□□□□ -2.04
RNF135Q8IUD6 snoU13.17-201ENST00000458802 104 ntBASIC2.28□□□□□ -2.04
RNF135Q8IUD6 RNA5SP233-201ENST00000459153 113 ntBASIC2.28□□□□□ -2.04
RNF135Q8IUD6 SNORA25.16-201ENST00000516741 121 ntBASIC2.28□□□□□ -2.04
RNF135Q8IUD6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF135Q8IUD6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF135Q8IUD6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.05
RNF135Q8IUD6 Y_RNA.36-201ENST00000362602 112 ntBASIC2.27□□□□□ -2.05
RNF135Q8IUD6 RNU4-58P-201ENST00000363192 141 ntBASIC2.27□□□□□ -2.05
RNF135Q8IUD6 MIR583-201ENST00000384846 75 ntBASIC2.27□□□□□ -2.05
RNF135Q8IUD6 RNU6-1194P-201ENST00000516208 104 ntBASIC2.27□□□□□ -2.05
RNF135Q8IUD6 MIR3664-201ENST00000579074 99 ntBASIC2.27□□□□□ -2.05
RNF135Q8IUD6 MIR4491-201ENST00000581087 68 ntBASIC2.27□□□□□ -2.05
RNF135Q8IUD6 MIR378A-201ENST00000362177 66 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 RNU6-330P-201ENST00000363015 107 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 RNU6-53P-201ENST00000365367 106 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 RNU6-471P-201ENST00000383944 106 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 MIR489-201ENST00000384923 84 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 SNORA17.3-201ENST00000391159 129 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 RNU6-321P-201ENST00000410912 106 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 AL356379.1-201ENST00000414105 126 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 MIR18B-201ENST00000454574 71 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 RNU6-165P-201ENST00000517170 99 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 MIR8070-201ENST00000616510 88 ntBASIC2.26□□□□□ -2.05
RNF135Q8IUD6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF135Q8IUD6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF135Q8IUD6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RNF135Q8IUD6 MIR942-201ENST00000401111 86 ntBASIC2.25□□□□□ -2.05
RNF135Q8IUD6 RNA5SP489-201ENST00000410986 109 ntBASIC2.25□□□□□ -2.05
RNF135Q8IUD6 RNU7-156P-201ENST00000517214 74 ntBASIC2.25□□□□□ -2.05
RNF135Q8IUD6 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
RNF135Q8IUD6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.25□□□□□ -2.05
RNF135Q8IUD6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
RNF135Q8IUD6 RNU6-1051P-201ENST00000365471 102 ntBASIC2.24□□□□□ -2.05
RNF135Q8IUD6 RNU6-154P-201ENST00000384306 106 ntBASIC2.24□□□□□ -2.05
RNF135Q8IUD6 Y_RNA.588-201ENST00000391254 102 ntBASIC2.24□□□□□ -2.05
RNF135Q8IUD6 SNORD93-201ENST00000408813 74 ntBASIC2.24□□□□□ -2.05
RNF135Q8IUD6 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 271.6 ms