Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MIR558-201ENST00000384920 94 ntBASIC-3.07□□□□□ -2.9
VPS13CQ709C8 RNU6-916P-201ENST00000516088 109 ntBASIC-3.07□□□□□ -2.9
VPS13CQ709C8 RNU6-191P-201ENST00000516295 94 ntBASIC-3.07□□□□□ -2.9
VPS13CQ709C8 RNU6-669P-201ENST00000365575 107 ntBASIC-3.07□□□□□ -2.9
VPS13CQ709C8 Y_RNA.399-201ENST00000383955 105 ntBASIC-3.07□□□□□ -2.9
VPS13CQ709C8 Y_RNA.105-201ENST00000363182 111 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 Y_RNA.173-201ENST00000363776 113 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 Y_RNA.237-201ENST00000364439 102 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 SNORD65C-201ENST00000390962 71 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 MIR2355-201ENST00000517199 87 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 RNU6-281P-201ENST00000384212 103 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 RNU7-175P-201ENST00000515915 61 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 RNU2-69P-201ENST00000516061 100 ntBASIC-3.08□□□□□ -2.9
VPS13CQ709C8 MRPS36P3-201ENST00000519284 130 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 MIR202-201ENST00000362219 110 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 RNU6-1145P-201ENST00000384246 107 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 Z82188.1-201ENST00000436709 154 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 RNU6-1234P-201ENST00000516877 103 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 uc_338.11-201ENST00000619132 160 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 MIR429-201ENST00000362106 83 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 SNORD115-32-201ENST00000364079 82 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 RNU6-1005P-201ENST00000384519 107 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 MIR548A3-201ENST00000385297 97 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 AL512427.1-201ENST00000618593 349 ntBASIC-3.09□□□□□ -2.9
VPS13CQ709C8 MIR513B-201ENST00000385136 84 ntBASIC-3.1□□□□□ -2.91
VPS13CQ709C8 AL160004.2-201ENST00000432935 350 ntBASIC-3.1□□□□□ -2.91
VPS13CQ709C8 AL022161.1-201ENST00000604390 213 ntBASIC-3.1□□□□□ -2.91
VPS13CQ709C8 SNORA17.4-201ENST00000391287 132 ntBASIC-3.1□□□□□ -2.91
VPS13CQ709C8 SNORD56.4-201ENST00000363883 71 ntBASIC-3.1□□□□□ -2.91
VPS13CQ709C8 MIR548AA1-201ENST00000384971 97 ntBASIC-3.1□□□□□ -2.91
VPS13CQ709C8 AL132765.2-201ENST00000610812 351 ntBASIC-3.1□□□□□ -2.91
VPS13CQ709C8 RNU6-108P-201ENST00000365558 107 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 RNU6-310P-201ENST00000384655 107 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 AC138393.2-201ENST00000414742 246 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 RNU6-126P-201ENST00000516685 103 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 MTCO3P23-201ENST00000561363 289 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-3.11□□□□□ -2.91
VPS13CQ709C8 AL157392.4-201ENST00000609756 345 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 Y_RNA.521-201ENST00000384560 114 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 AC115989.2-201ENST00000578640 563 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 AC090617.10-201ENST00000624308 134 ntBASIC-3.11□□□□□ -2.91
VPS13CQ709C8 RNU6-238P-201ENST00000363313 106 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 RNU6-715P-201ENST00000365204 103 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 RNY1P6-201ENST00000384193 109 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 RNA5SP144-201ENST00000410846 116 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 AP002392.1-201ENST00000537692 208 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 MIR3118-1-201ENST00000581787 76 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 SNORD56.2-201ENST00000363242 71 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 AC139453.2-201ENST00000487255 133 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 MIR3912-201ENST00000577566 105 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 RNU5B-1-201ENST00000363286 116 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 RNU6-957P-201ENST00000363652 99 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 MTND3P7-201ENST00000474435 343 ntBASIC-3.12□□□□□ -2.91
VPS13CQ709C8 RNU6-891P-201ENST00000384280 111 ntBASIC-3.13□□□□□ -2.91
VPS13CQ709C8 MTND1P12-201ENST00000455231 147 ntBASIC-3.13□□□□□ -2.91
VPS13CQ709C8 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.13□□□□□ -2.91
VPS13CQ709C8 RNU6-382P-201ENST00000365181 106 ntBASIC-3.13□□□□□ -2.91
VPS13CQ709C8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-3.13□□□□□ -2.91
VPS13CQ709C8 AC016252.1-201ENST00000609721 474 ntBASIC-3.13□□□□□ -2.91
VPS13CQ709C8 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.13□□□□□ -2.91
VPS13CQ709C8 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.13□□□□□ -2.91
VPS13CQ709C8 AC069545.1-201ENST00000605671 358 ntBASIC-3.13□□□□□ -2.91
VPS13CQ709C8 MTATP6P29-201ENST00000415057 132 ntBASIC-3.14□□□□□ -2.91
VPS13CQ709C8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-3.14□□□□□ -2.91
VPS13CQ709C8 RNY3P8-201ENST00000411366 126 ntBASIC-3.14□□□□□ -2.91
VPS13CQ709C8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-3.14□□□□□ -2.91
VPS13CQ709C8 RNU6-864P-201ENST00000516256 108 ntBASIC-3.14□□□□□ -2.91
VPS13CQ709C8 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 RNU6-353P-201ENST00000364266 108 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 Y_RNA.357-201ENST00000365487 109 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-3.15□□□□□ -2.91
VPS13CQ709C8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-3.15□□□□□ -2.91
VPS13CQ709C8 MIR376B-201ENST00000614515 100 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 AC009779.6-201ENST00000603972 165 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 RNU6-470P-201ENST00000515954 104 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 MTND4LP25-201ENST00000570218 163 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 AP001506.1-201ENST00000615444 211 ntBASIC-3.15□□□□□ -2.91
VPS13CQ709C8 RNU7-140P-201ENST00000459546 60 ntBASIC-3.16□□□□□ -2.91
VPS13CQ709C8 RNA5SP449-201ENST00000516871 130 ntBASIC-3.16□□□□□ -2.91
VPS13CQ709C8 U2.17-201ENST00000611454 95 ntBASIC-3.16□□□□□ -2.91
VPS13CQ709C8 AL118496.2-201ENST00000448300 230 ntBASIC-3.16□□□□□ -2.92
VPS13CQ709C8 MIR5696-201ENST00000578474 85 ntBASIC-3.16□□□□□ -2.92
VPS13CQ709C8 MIR4536-1-201ENST00000583537 88 ntBASIC-3.16□□□□□ -2.92
VPS13CQ709C8 Y_RNA.66-201ENST00000362862 102 ntBASIC-3.16□□□□□ -2.92
VPS13CQ709C8 RNU6-598P-201ENST00000364017 105 ntBASIC-3.16□□□□□ -2.92
VPS13CQ709C8 RPS29P25-201ENST00000481709 171 ntBASIC-3.16□□□□□ -2.92
VPS13CQ709C8 Y_RNA.310-201ENST00000365063 113 ntBASIC-3.17□□□□□ -2.92
VPS13CQ709C8 RNU2-31P-201ENST00000516954 155 ntBASIC-3.17□□□□□ -2.92
VPS13CQ709C8 RNU6-822P-201ENST00000362707 106 ntBASIC-3.17□□□□□ -2.92
VPS13CQ709C8 RNU6-201P-201ENST00000517100 61 ntBASIC-3.17□□□□□ -2.92
VPS13CQ709C8 RNU6-769P-201ENST00000384407 104 ntBASIC-3.17□□□□□ -2.92
VPS13CQ709C8 AL691482.2-201ENST00000457453 84 ntBASIC-3.17□□□□□ -2.92
VPS13CQ709C8 RNU7-141P-201ENST00000459304 62 ntBASIC-3.18□□□□□ -2.92
VPS13CQ709C8 RNU6-625P-201ENST00000459412 107 ntBASIC-3.18□□□□□ -2.92
VPS13CQ709C8 FGF7P7-201ENST00000514120 227 ntBASIC-3.18□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms