Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 RNY1P6-201ENST00000384193 109 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 SNORD77B-201ENST00000391112 67 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 AF228730.3-201ENST00000436691 102 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 AC083798.1-201ENST00000472671 131 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 MIR4659A-201ENST00000580269 81 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.42□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.42□□□□□ -2.64
CSPG4Q6UVK1 SNRPGP8-201ENST00000454064 226 ntBASIC-1.42□□□□□ -2.64
CSPG4Q6UVK1 MTCO2P24-201ENST00000515611 426 ntBASIC-1.42□□□□□ -2.64
CSPG4Q6UVK1 RNU6-864P-201ENST00000516256 108 ntBASIC-1.42□□□□□ -2.64
CSPG4Q6UVK1 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.42□□□□□ -2.64
CSPG4Q6UVK1 MIR6739-201ENST00000622461 75 ntBASIC-1.42□□□□□ -2.64
CSPG4Q6UVK1 SNORD63-201ENST00000384262 68 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 MIR519A2-201ENST00000384990 87 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 MIR548A1-201ENST00000385041 97 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 AC113618.1-201ENST00000416747 285 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 AC019235.1-201ENST00000503847 207 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 RNU6-168P-201ENST00000516189 101 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 AP001362.1-201ENST00000625165 124 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 RNU6-818P-201ENST00000364837 108 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 SNORA33.1-201ENST00000364957 130 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 MIR181A1-201ENST00000385026 110 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 SNORD42B-201ENST00000458893 67 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 MIR4509-3-201ENST00000578671 94 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 MIR4509-2-201ENST00000583920 94 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 AL157392.4-201ENST00000609756 345 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 MIR4509-1-201ENST00000618224 94 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 AC048344.4-201ENST00000619744 527 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 MIR3662-201ENST00000637030 95 ntBASIC-1.43□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 RNU6-690P-201ENST00000365242 106 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MRPS35P2-201ENST00000508242 191 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 FGF7P4-201ENST00000509595 295 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 U7.5-201ENST00000517224 61 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 AL512360.1-201ENST00000555346 234 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 CYP3A54P-201ENST00000566950 75 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MIR5688-201ENST00000580619 83 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 AC084781.2-201ENST00000615568 161 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 PISRT1.1-201ENST00000616930 107 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MIR526A2-201ENST00000390198 65 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MTND2P31-201ENST00000512602 616 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 RNU6-273P-201ENST00000516937 96 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MIR5701-3-201ENST00000578890 82 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MIR466-201ENST00000580653 84 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MIR3123-201ENST00000583417 75 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MIR5701-1-201ENST00000585138 82 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 MIR5701-2-201ENST00000615634 82 ntBASIC-1.44□□□□□ -2.64
CSPG4Q6UVK1 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 RNU6-260P-201ENST00000384092 107 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 RNU6-297P-201ENST00000384636 107 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 AP002392.1-201ENST00000537692 208 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 AF246928.1-201ENST00000623768 87 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 SNORA63.2-201ENST00000362603 126 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 SNORD19-201ENST00000391191 68 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 RNU4-69P-201ENST00000410677 143 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 RNU2-72P-201ENST00000411175 163 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 MIR3915-201ENST00000578518 97 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.45□□□□□ -2.64
CSPG4Q6UVK1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 RNU6-647P-201ENST00000364243 107 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 SNORD116-11-201ENST00000383882 92 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 MTND2P14-201ENST00000482139 351 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 MIR548AM-201ENST00000584298 74 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 AC040904.1-201ENST00000590850 223 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 MIR514A2-201ENST00000385131 88 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 MIR514A3-201ENST00000385132 88 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 SNORA79-201ENST00000408376 140 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 AL162413.1-201ENST00000603198 110 ntBASIC-1.46□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 SNORA75-201ENST00000384158 137 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 MIR628-201ENST00000385229 95 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 RNU7-125P-201ENST00000458760 62 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 RNA5SP236-201ENST00000516169 116 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 RNU7-110P-201ENST00000516891 62 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms