Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
RNF43Q68DV7 RNU6-531P-201ENST00000516694 104 ntBASIC2.08□□□□□ -2.08
RNF43Q68DV7 RNU7-193P-201ENST00000516723 65 ntBASIC2.08□□□□□ -2.08
RNF43Q68DV7 RNU6-303P-201ENST00000517091 106 ntBASIC2.08□□□□□ -2.08
RNF43Q68DV7 MIR4264-201ENST00000583520 66 ntBASIC2.08□□□□□ -2.08
RNF43Q68DV7 uc_338.6-201ENST00000613544 171 ntBASIC2.08□□□□□ -2.08
RNF43Q68DV7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RNF43Q68DV7 MIR513A1-201ENST00000385138 129 ntBASIC2.07□□□□□ -2.08
RNF43Q68DV7 SNORD23.1-201ENST00000408212 104 ntBASIC2.07□□□□□ -2.08
RNF43Q68DV7 AC074348.1-201ENST00000426503 132 ntBASIC2.07□□□□□ -2.08
RNF43Q68DV7 RNU7-62P-201ENST00000458856 62 ntBASIC2.07□□□□□ -2.08
RNF43Q68DV7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
RNF43Q68DV7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RNF43Q68DV7 RNU5F-1-201ENST00000362507 117 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 Y_RNA.355-201ENST00000365462 98 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 Y_RNA.386-201ENST00000383913 105 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 RNU6-649P-201ENST00000384463 107 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 MIR518E-201ENST00000385252 88 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 RNU6-587P-201ENST00000391282 106 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 SNORD63B-201ENST00000411005 70 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 SNORA25.16-201ENST00000516741 121 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 SNORA31.25-201ENST00000517242 134 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.06□□□□□ -2.08
RNF43Q68DV7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
RNF43Q68DV7 Y_RNA.12-201ENST00000362393 112 ntBASIC2.05□□□□□ -2.08
RNF43Q68DV7 Y_RNA.596-201ENST00000410462 109 ntBASIC2.05□□□□□ -2.08
RNF43Q68DV7 snoU13.25-201ENST00000458945 104 ntBASIC2.05□□□□□ -2.08
RNF43Q68DV7 MIR4491-201ENST00000581087 68 ntBASIC2.05□□□□□ -2.08
RNF43Q68DV7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.05□□□□□ -2.08
RNF43Q68DV7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RNF43Q68DV7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNF43Q68DV7 RNU6-540P-201ENST00000384622 101 ntBASIC2.04□□□□□ -2.08
RNF43Q68DV7 MIR499A-201ENST00000384903 122 ntBASIC2.04□□□□□ -2.08
RNF43Q68DV7 MT-TF-201ENST00000387314 71 ntBASIC2.04□□□□□ -2.08
RNF43Q68DV7 RNU6-321P-201ENST00000410912 106 ntBASIC2.04□□□□□ -2.08
RNF43Q68DV7 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
RNF43Q68DV7 snoU13.17-201ENST00000458802 104 ntBASIC2.04□□□□□ -2.08
RNF43Q68DV7 RNU4-58P-201ENST00000363192 141 ntBASIC2.03□□□□□ -2.08
RNF43Q68DV7 SNORA17.3-201ENST00000391159 129 ntBASIC2.03□□□□□ -2.08
RNF43Q68DV7 SNORD30.1-201ENST00000391309 70 ntBASIC2.03□□□□□ -2.08
RNF43Q68DV7 RPL30P7-201ENST00000479312 323 ntBASIC2.03□□□□□ -2.08
RNF43Q68DV7 MIR2115-201ENST00000516657 100 ntBASIC2.03□□□□□ -2.08
RNF43Q68DV7 RNU2-19P-201ENST00000517288 84 ntBASIC2.03□□□□□ -2.08
RNF43Q68DV7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF43Q68DV7 YWHAEP2-201ENST00000580066 112 ntBASIC2.03□□□□□ -2.08
RNF43Q68DV7 YWHAEP3-201ENST00000582767 121 ntBASIC2.03□□□□□ -2.08
RNF43Q68DV7 Y_RNA.588-201ENST00000391254 102 ntBASIC2.02□□□□□ -2.09
RNF43Q68DV7 RNU2-59P-201ENST00000410482 191 ntBASIC2.02□□□□□ -2.09
RNF43Q68DV7 RNU6-1194P-201ENST00000516208 104 ntBASIC2.02□□□□□ -2.09
RNF43Q68DV7 RNU6-947P-201ENST00000516264 106 ntBASIC2.02□□□□□ -2.09
RNF43Q68DV7 MIR8070-201ENST00000616510 88 ntBASIC2.02□□□□□ -2.09
RNF43Q68DV7 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.02□□□□□ -2.09
RNF43Q68DV7 MIR6516-201ENST00000630554 81 ntBASIC2.02□□□□□ -2.09
RNF43Q68DV7 RNU6-330P-201ENST00000363015 107 ntBASIC2.01□□□□□ -2.09
RNF43Q68DV7 RNU6-53P-201ENST00000365367 106 ntBASIC2.01□□□□□ -2.09
RNF43Q68DV7 RNU6-439P-201ENST00000384188 106 ntBASIC2.01□□□□□ -2.09
RNF43Q68DV7 RNU6-1241P-201ENST00000384536 107 ntBASIC2.01□□□□□ -2.09
RNF43Q68DV7 MT-TN-201ENST00000387400 73 ntBASIC2.01□□□□□ -2.09
RNF43Q68DV7 SNORD93-201ENST00000408813 74 ntBASIC2.01□□□□□ -2.09
RNF43Q68DV7 JTBP1-201ENST00000441314 247 ntBASIC2.01□□□□□ -2.09
RNF43Q68DV7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
RNF43Q68DV7 RNU6-403P-201ENST00000363163 104 ntBASIC2□□□□□ -2.09
RNF43Q68DV7 SNORD115-31-201ENST00000365318 82 ntBASIC2□□□□□ -2.09
RNF43Q68DV7 RNU6-800P-201ENST00000384473 103 ntBASIC2□□□□□ -2.09
RNF43Q68DV7 RNU7-195P-201ENST00000458793 62 ntBASIC2□□□□□ -2.09
RNF43Q68DV7 AC055731.1-201ENST00000474387 401 ntBASIC2□□□□□ -2.09
RNF43Q68DV7 TRAJ51-201ENST00000504127 63 ntBASIC2□□□□□ -2.09
RNF43Q68DV7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2□□□□□ -2.09
RNF43Q68DV7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF43Q68DV7 Y_RNA.205-201ENST00000364128 113 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 RNU6-654P-201ENST00000364373 107 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 RNU6-1051P-201ENST00000365471 102 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 SNORA8.1-201ENST00000384250 140 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 MIR154-201ENST00000385243 84 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 SNORD100-201ENST00000408573 76 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 RNA5SP95-201ENST00000410319 137 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 TRMT112P2-201ENST00000512910 132 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 U6.111-201ENST00000636093 83 ntBASIC1.99□□□□□ -2.09
RNF43Q68DV7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RNF43Q68DV7 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 Y_RNA.207-201ENST00000364142 106 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 RNU1-36P-201ENST00000365130 165 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 RNA5SP190-201ENST00000365222 118 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 Y_RNA.536-201ENST00000384621 113 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 MIR1185-1-201ENST00000408598 86 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 AL606490.4-201ENST00000423117 127 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 AP003716.2-201ENST00000528260 108 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 AC013244.2-201ENST00000603396 103 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 AL359821.1-201ENST00000605519 182 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 ZNF209P-201ENST00000593450 2304 ntBASIC1.98□□□□□ -2.09
RNF43Q68DV7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.97□□□□□ -2.09
RNF43Q68DV7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.97□□□□□ -2.09
RNF43Q68DV7 Y_RNA.371-201ENST00000365591 113 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 682.6 ms