Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.85□□□□□ -2.11
PCDH1Q08174 RNU6-24P-201ENST00000384440 107 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 SNORA75.2-201ENST00000391138 150 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 RNU6-243P-201ENST00000391140 107 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 SNORA75.3-201ENST00000391231 150 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 SNORD83.1-201ENST00000411362 77 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.84□□□□□ -2.11
PCDH1Q08174 SNORA31.2-201ENST00000516019 134 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 RNA5SP182-201ENST00000516064 82 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 RNU6-1194P-201ENST00000516208 104 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 AC140658.3-201ENST00000567603 271 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
PCDH1Q08174 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
PCDH1Q08174 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.83□□□□□ -2.12
PCDH1Q08174 snoU13.11-201ENST00000459219 104 ntBASIC1.83□□□□□ -2.12
PCDH1Q08174 RNU7-153P-201ENST00000516455 62 ntBASIC1.83□□□□□ -2.12
PCDH1Q08174 AC036111.3-201ENST00000526389 112 ntBASIC1.83□□□□□ -2.12
PCDH1Q08174 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PCDH1Q08174 RNA5SP458-201ENST00000516188 119 ntBASIC1.82□□□□□ -2.12
PCDH1Q08174 Y_RNA.676-201ENST00000516393 96 ntBASIC1.82□□□□□ -2.12
PCDH1Q08174 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PCDH1Q08174 MIR101-2-201ENST00000362195 79 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 RNU6-934P-201ENST00000365154 107 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 U8.13-201ENST00000390842 128 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 SNORD100-201ENST00000408573 76 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 SNORD63B-201ENST00000411005 70 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 RNU7-106P-201ENST00000459514 67 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 AC013244.2-201ENST00000603396 103 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 MIR6082-201ENST00000613604 109 ntBASIC1.81□□□□□ -2.12
PCDH1Q08174 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PCDH1Q08174 Y_RNA.13-201ENST00000362403 112 ntBASIC1.8□□□□□ -2.12
PCDH1Q08174 Y_RNA.164-201ENST00000363709 102 ntBASIC1.8□□□□□ -2.12
PCDH1Q08174 RNU6-65P-201ENST00000516332 98 ntBASIC1.8□□□□□ -2.12
PCDH1Q08174 MIR4536-1-201ENST00000583537 88 ntBASIC1.8□□□□□ -2.12
PCDH1Q08174 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PCDH1Q08174 Y_RNA.363-201ENST00000365529 113 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 Y_RNA.508-201ENST00000384502 114 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 MIR635-201ENST00000384830 98 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 RNU6-466P-201ENST00000391224 103 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 SNORA25.13-201ENST00000516395 103 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 RNU6-902P-201ENST00000517212 91 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 MIR4771-2-201ENST00000577758 74 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 MIR548H5-201ENST00000580314 60 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 MIR4771-1-201ENST00000582617 74 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 RNU7-10P-201ENST00000607194 63 ntBASIC1.79□□□□□ -2.12
PCDH1Q08174 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PCDH1Q08174 Y_RNA.94-201ENST00000363068 106 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 Y_RNA.283-201ENST00000364798 112 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 Y_RNA.338-201ENST00000365320 114 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 Y_RNA.536-201ENST00000384621 113 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 MIR583-201ENST00000384846 75 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 MIR125B2-201ENST00000385128 89 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 SNORA26.9-201ENST00000391322 122 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 SNORD111-201ENST00000408139 94 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 AL591704.2-201ENST00000421658 181 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 AC015818.7-201ENST00000428754 109 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
PCDH1Q08174 AC106800.4-201ENST00000614905 153 ntBASIC1.78□□□□□ -2.12
PCDH1Q08174 Y_RNA.221-201ENST00000364248 96 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 RNU6-811P-201ENST00000384069 107 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 MIR934-201ENST00000401241 83 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 AL603825.1-201ENST00000438481 80 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 TRAJ51-201ENST00000504127 63 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 RNU6-295P-201ENST00000516901 104 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 RNU6-765P-201ENST00000516916 99 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 AC019288.1-201ENST00000557918 224 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 AC023827.1-201ENST00000569247 97 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 MIR4255-201ENST00000579351 72 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 MIR4712-201ENST00000583750 82 ntBASIC1.77□□□□□ -2.13
PCDH1Q08174 Y_RNA.56-201ENST00000362798 112 ntBASIC1.76□□□□□ -2.13
PCDH1Q08174 RNU7-21P-201ENST00000459430 62 ntBASIC1.76□□□□□ -2.13
PCDH1Q08174 RNU6-75P-201ENST00000515944 104 ntBASIC1.76□□□□□ -2.13
PCDH1Q08174 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PCDH1Q08174 Y_RNA.42-201ENST00000362660 108 ntBASIC1.75□□□□□ -2.13
PCDH1Q08174 SNORA80D-201ENST00000384488 135 ntBASIC1.75□□□□□ -2.13
PCDH1Q08174 MIR519A1-201ENST00000385257 85 ntBASIC1.75□□□□□ -2.13
PCDH1Q08174 RPS26P5-201ENST00000418544 335 ntBASIC1.75□□□□□ -2.13
PCDH1Q08174 RNU7-40P-201ENST00000516397 64 ntBASIC1.75□□□□□ -2.13
PCDH1Q08174 MIR4796-201ENST00000580742 81 ntBASIC1.75□□□□□ -2.13
PCDH1Q08174 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
PCDH1Q08174 RNU6-957P-201ENST00000363652 99 ntBASIC1.74□□□□□ -2.13
PCDH1Q08174 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
PCDH1Q08174 MIR9-3-201ENST00000385084 90 ntBASIC1.74□□□□□ -2.13
PCDH1Q08174 RNU6-910P-201ENST00000390844 107 ntBASIC1.74□□□□□ -2.13
PCDH1Q08174 RNU6-129P-201ENST00000391022 107 ntBASIC1.74□□□□□ -2.13
PCDH1Q08174 RNU7-195P-201ENST00000458793 62 ntBASIC1.74□□□□□ -2.13
PCDH1Q08174 RNU7-156P-201ENST00000517214 74 ntBASIC1.74□□□□□ -2.13
PCDH1Q08174 SNORD92-201ENST00000585078 85 ntBASIC1.74□□□□□ -2.13
PCDH1Q08174 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PCDH1Q08174 RNA5SP247-201ENST00000411181 105 ntBASIC1.73□□□□□ -2.13
PCDH1Q08174 AC092628.1-201ENST00000436250 252 ntBASIC1.73□□□□□ -2.13
PCDH1Q08174 MIR3064-201ENST00000581130 66 ntBASIC1.73□□□□□ -2.13
PCDH1Q08174 MIR4676-201ENST00000583078 72 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms