Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.47□□□□□ -2.64
CDC42P60953 RNU6-720P-201ENST00000516363 108 ntBASIC-1.47□□□□□ -2.64
CDC42P60953 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.47□□□□□ -2.64
CDC42P60953 AC009779.6-201ENST00000603972 165 ntBASIC-1.47□□□□□ -2.64
CDC42P60953 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 RNA5SP67-201ENST00000516422 131 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 RNY1P9-201ENST00000532431 109 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 AC092794.1-201ENST00000612734 582 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 MIR376B-201ENST00000614515 100 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 TRDV1-202ENST00000621643 102 ntBASIC-1.48□□□□□ -2.65
CDC42P60953 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 MIR1302-11-201ENST00000408051 138 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 MIR1302-9-201ENST00000408365 138 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 MIR548F1-201ENST00000408667 84 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 MIR1302-10-201ENST00000408734 138 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.49□□□□□ -2.65
CDC42P60953 MIR1302-2-201ENST00000607096 138 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 MIR8068-201ENST00000618032 68 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 AC087741.2-201ENST00000619415 172 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 AC090574.1-201ENST00000623186 233 ntBASIC-1.49□□□□□ -2.65
CDC42P60953 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.5□□□□□ -2.65
CDC42P60953 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.5□□□□□ -2.65
CDC42P60953 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.5□□□□□ -2.65
CDC42P60953 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.5□□□□□ -2.65
CDC42P60953 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 RNU4-24P-201ENST00000364565 139 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 RNU6-381P-201ENST00000391259 108 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 RNU7-152P-201ENST00000458982 64 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 AC084782.3-201ENST00000612282 578 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 AC084781.2-201ENST00000615568 161 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 U6.100-201ENST00000636230 99 ntBASIC-1.51□□□□□ -2.65
CDC42P60953 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.52□□□□□ -2.65
CDC42P60953 SNORD116-6-201ENST00000384711 96 ntBASIC-1.52□□□□□ -2.65
CDC42P60953 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.52□□□□□ -2.65
CDC42P60953 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.52□□□□□ -2.65
CDC42P60953 RNU6-976P-201ENST00000516086 111 ntBASIC-1.52□□□□□ -2.65
CDC42P60953 RNU6-706P-201ENST00000517229 104 ntBASIC-1.52□□□□□ -2.65
CDC42P60953 MIR548O2-201ENST00000616090 70 ntBASIC-1.52□□□□□ -2.65
CDC42P60953 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 RNU4-32P-201ENST00000363404 141 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 RNU6-121P-201ENST00000410525 99 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 SNORD57-201ENST00000448188 72 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 RNA5SP476-201ENST00000516613 103 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 snoU83B.1-201ENST00000517136 88 ntBASIC-1.53□□□□□ -2.65
CDC42P60953 SNORD27-201ENST00000363981 72 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 AL121914.1-201ENST00000450188 156 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 RNU7-164P-201ENST00000459221 62 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 SERF1AP1-201ENST00000514575 187 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 RNA5SP236-201ENST00000516169 116 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 AC021443.1-201ENST00000604478 211 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 snoR1.1-201ENST00000628177 80 ntBASIC-1.54□□□□□ -2.66
CDC42P60953 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 RNU6-103P-201ENST00000363686 107 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 RNU6-243P-201ENST00000391140 107 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 AL353813.1-201ENST00000440700 253 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.55□□□□□ -2.66
CDC42P60953 AC138907.4-201ENST00000570107 226 ntBASIC-1.55□□□□□ -2.66
CDC42P60953 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.56□□□□□ -2.66
CDC42P60953 SNORD114-4-201ENST00000363962 75 ntBASIC-1.56□□□□□ -2.66
CDC42P60953 MIR548E-201ENST00000408287 88 ntBASIC-1.56□□□□□ -2.66
CDC42P60953 AL161932.1-201ENST00000437408 146 ntBASIC-1.56□□□□□ -2.66
CDC42P60953 SNORD18.2-201ENST00000459604 70 ntBASIC-1.56□□□□□ -2.66
CDC42P60953 RNA5SP461-201ENST00000516451 104 ntBASIC-1.56□□□□□ -2.66
CDC42P60953 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.56□□□□□ -2.66
CDC42P60953 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.56□□□□□ -2.66
CDC42P60953 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.57□□□□□ -2.66
CDC42P60953 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.57□□□□□ -2.66
CDC42P60953 MIR582-201ENST00000365731 98 ntBASIC-1.57□□□□□ -2.66
CDC42P60953 RNU6-905P-201ENST00000384434 107 ntBASIC-1.57□□□□□ -2.66
CDC42P60953 SNORD38.2-201ENST00000384470 69 ntBASIC-1.57□□□□□ -2.66
CDC42P60953 SNORD2.1-201ENST00000458762 69 ntBASIC-1.57□□□□□ -2.66
CDC42P60953 RNU7-123P-201ENST00000515911 60 ntBASIC-1.57□□□□□ -2.66
CDC42P60953 AC026421.1-201ENST00000519101 163 ntBASIC-1.57□□□□□ -2.66
CDC42P60953 SNORD36A-201ENST00000362874 73 ntBASIC-1.58□□□□□ -2.66
CDC42P60953 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.58□□□□□ -2.66
CDC42P60953 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.58□□□□□ -2.66
CDC42P60953 RNU6-616P-201ENST00000384353 107 ntBASIC-1.58□□□□□ -2.66
CDC42P60953 MIR34C-201ENST00000384831 77 ntBASIC-1.58□□□□□ -2.66
CDC42P60953 MIR8485-201ENST00000401372 91 ntBASIC-1.58□□□□□ -2.66
CDC42P60953 RNU7-134P-201ENST00000458997 64 ntBASIC-1.58□□□□□ -2.66
CDC42P60953 RNU6-240P-201ENST00000516098 97 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 225.2 ms