Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MIR4263-201ENST00000584745 83 ntBASIC-0.44□□□□□ -2.48
CMC4P56277 AL670379.3-201ENST00000605040 251 ntBASIC-0.44□□□□□ -2.48
CMC4P56277 MIR6759-201ENST00000638110 65 ntBASIC-0.44□□□□□ -2.48
CMC4P56277 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.45□□□□□ -2.48
CMC4P56277 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.45□□□□□ -2.48
CMC4P56277 MIR516B1-201ENST00000385211 90 ntBASIC-0.45□□□□□ -2.48
CMC4P56277 AL603914.1-201ENST00000401964 204 ntBASIC-0.45□□□□□ -2.48
CMC4P56277 AC107027.2-201ENST00000512197 115 ntBASIC-0.45□□□□□ -2.48
CMC4P56277 MIR3646-201ENST00000578301 84 ntBASIC-0.45□□□□□ -2.48
CMC4P56277 MIR655-201ENST00000362159 97 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 SNORD115-44-201ENST00000365391 82 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 RNU6-811P-201ENST00000384069 107 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 RNU2-38P-201ENST00000410856 79 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 RNU7-195P-201ENST00000458793 62 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.46□□□□□ -2.48
CMC4P56277 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 AL117187.1-201ENST00000555482 181 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 AC069503.3-201ENST00000618674 145 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 AL162726.3-218ENST00000636401 95 ntBASIC-0.46□□□□□ -2.48
CMC4P56277 RNU6-312P-201ENST00000364629 107 ntBASIC-0.47□□□□□ -2.48
CMC4P56277 SNORD115-35-201ENST00000365122 82 ntBASIC-0.47□□□□□ -2.48
CMC4P56277 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.47□□□□□ -2.48
CMC4P56277 MIR617-201ENST00000385030 97 ntBASIC-0.47□□□□□ -2.48
CMC4P56277 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.47□□□□□ -2.48
CMC4P56277 MTND2P23-201ENST00000422990 651 ntBASIC-0.47□□□□□ -2.48
CMC4P56277 AC093423.1-201ENST00000440817 142 ntBASIC-0.47□□□□□ -2.48
CMC4P56277 RNU6-524P-201ENST00000384270 107 ntBASIC-0.48□□□□□ -2.49
CMC4P56277 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.48□□□□□ -2.49
CMC4P56277 RNU6-918P-201ENST00000391219 106 ntBASIC-0.48□□□□□ -2.49
CMC4P56277 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.48□□□□□ -2.49
CMC4P56277 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.48□□□□□ -2.49
CMC4P56277 MIR6507-201ENST00000613630 70 ntBASIC-0.48□□□□□ -2.49
CMC4P56277 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.48□□□□□ -2.49
CMC4P56277 AC244250.2-201ENST00000418731 148 ntBASIC-0.49□□□□□ -2.49
CMC4P56277 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
CMC4P56277 RNU4-71P-201ENST00000516258 113 ntBASIC-0.49□□□□□ -2.49
CMC4P56277 MIR376B-201ENST00000614515 100 ntBASIC-0.49□□□□□ -2.49
CMC4P56277 RN7SL660P-201ENST00000614852 299 ntBASIC-0.49□□□□□ -2.49
CMC4P56277 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 MIR519E-201ENST00000385075 84 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 AC009779.6-201ENST00000603972 165 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 MIR8064-201ENST00000612863 90 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 uc_338.10-201ENST00000621872 182 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 MIR6844-201ENST00000637122 62 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 MIR4788-201ENST00000639104 80 ntBASIC-0.5□□□□□ -2.49
CMC4P56277 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 SNORD114-28-201ENST00000363610 72 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 SNORD27-201ENST00000363981 72 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 RNA5SP205-201ENST00000364653 136 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 SNORD18B-201ENST00000365659 72 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 RNU6-616P-201ENST00000384353 107 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 MIR181B2-201ENST00000385004 89 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 RNU7-106P-201ENST00000459514 67 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 MIR548AG2-201ENST00000581228 64 ntBASIC-0.51□□□□□ -2.49
CMC4P56277 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 RNA5SP98-201ENST00000363158 137 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 RNU4-84P-201ENST00000364200 139 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 U8.6-201ENST00000364939 135 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 AC096531.1-201ENST00000419107 107 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 RNU6-850P-201ENST00000516934 103 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
CMC4P56277 AL590491.3-201ENST00000610731 82 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 AC087741.2-201ENST00000619415 172 ntBASIC-0.52□□□□□ -2.49
CMC4P56277 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.53□□□□□ -2.49
CMC4P56277 RNA5SP275-201ENST00000363936 118 ntBASIC-0.53□□□□□ -2.49
CMC4P56277 SNORD114-29-201ENST00000364819 70 ntBASIC-0.53□□□□□ -2.49
CMC4P56277 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.53□□□□□ -2.49
CMC4P56277 RNU7-121P-201ENST00000516604 62 ntBASIC-0.53□□□□□ -2.49
CMC4P56277 RNU7-188P-201ENST00000517063 64 ntBASIC-0.53□□□□□ -2.49
CMC4P56277 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.54□□□□□ -2.5
CMC4P56277 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 SNORD38.2-201ENST00000384470 69 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 RNU6-239P-201ENST00000390990 99 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 RNU6-588P-201ENST00000410281 105 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 RNY4P20-201ENST00000516678 93 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 YWHAEP2-201ENST00000580066 112 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 AL137067.1-201ENST00000615933 120 ntBASIC-0.54□□□□□ -2.5
CMC4P56277 SNORD115-19-201ENST00000363098 82 ntBASIC-0.55□□□□□ -2.5
CMC4P56277 SNORD115-18-201ENST00000363293 82 ntBASIC-0.55□□□□□ -2.5
CMC4P56277 SNORD115-17-201ENST00000364612 82 ntBASIC-0.55□□□□□ -2.5
CMC4P56277 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.55□□□□□ -2.5
CMC4P56277 MIR606-201ENST00000384851 96 ntBASIC-0.55□□□□□ -2.5
CMC4P56277 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms