Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 RNU6-574P-201ENST00000384265 107 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 MIR635-201ENST00000384830 98 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 SNORD41.1-201ENST00000391000 69 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 AC097635.1-201ENST00000450678 155 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 RPL39P34-201ENST00000477141 156 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 MIR4752-201ENST00000579672 72 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 AC067863.3-201ENST00000624172 122 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 MIR3658-201ENST00000636291 56 ntBASIC-0.05□□□□□ -2.42
LIM2P55344 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
LIM2P55344 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.06□□□□□ -2.42
LIM2P55344 MIR548L-201ENST00000408303 86 ntBASIC-0.06□□□□□ -2.42
LIM2P55344 AP002392.1-201ENST00000537692 208 ntBASIC-0.06□□□□□ -2.42
LIM2P55344 MIR4500-201ENST00000579472 76 ntBASIC-0.06□□□□□ -2.42
LIM2P55344 AP001362.1-201ENST00000625165 124 ntBASIC-0.06□□□□□ -2.42
LIM2P55344 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 RNY1P11-201ENST00000363759 113 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
LIM2P55344 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 RNU7-120P-201ENST00000459334 63 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 RNU7-2P-201ENST00000516096 62 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 RNU7-129P-201ENST00000516128 62 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.07□□□□□ -2.42
LIM2P55344 AL137067.1-201ENST00000615933 120 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 MIR2909-201ENST00000617113 69 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 MIR499B-201ENST00000636498 73 ntBASIC-0.07□□□□□ -2.42
LIM2P55344 RNU6-508P-201ENST00000363231 103 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 RNU6-652P-201ENST00000365488 107 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 MIR145-201ENST00000384967 88 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 MT-TG-201ENST00000387429 68 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 RNU6-269P-201ENST00000391077 97 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 AC108059.2-201ENST00000434626 151 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 RNU7-104P-201ENST00000459398 79 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 TRAJ51-201ENST00000504127 63 ntBASIC-0.08□□□□□ -2.42
LIM2P55344 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.08□□□□□ -2.42
LIM2P55344 RNU6-200P-201ENST00000364743 107 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 SNORD115-35-201ENST00000365122 82 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 MIR599-201ENST00000385069 95 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 MIR643-201ENST00000385267 97 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 MIR548H2-201ENST00000408874 88 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 AC104692.1-201ENST00000472406 90 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 RNY4P20-201ENST00000516678 93 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 MIR548AD-201ENST00000584780 82 ntBASIC-0.09□□□□□ -2.42
LIM2P55344 SNORD114-5-201ENST00000362928 70 ntBASIC-0.1□□□□□ -2.43
LIM2P55344 RNU6-161P-201ENST00000363051 106 ntBASIC-0.1□□□□□ -2.43
LIM2P55344 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.1□□□□□ -2.43
LIM2P55344 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.1□□□□□ -2.43
LIM2P55344 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.1□□□□□ -2.43
LIM2P55344 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.1□□□□□ -2.43
LIM2P55344 uc_338.28-201ENST00000612082 187 ntBASIC-0.1□□□□□ -2.43
LIM2P55344 AC099654.10-201ENST00000640395 161 ntBASIC-0.1□□□□□ -2.43
LIM2P55344 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.1□□□□□ -2.43
LIM2P55344 RNU6-379P-201ENST00000363813 104 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 RNU6-571P-201ENST00000384128 107 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 RNU6-616P-201ENST00000384353 107 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 MIR501-201ENST00000390204 84 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 RNU6-861P-201ENST00000516745 106 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 AC108081.1-201ENST00000604358 221 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 SNORA70.25-201ENST00000612741 95 ntBASIC-0.11□□□□□ -2.43
LIM2P55344 RNU6-682P-201ENST00000363843 106 ntBASIC-0.12□□□□□ -2.43
LIM2P55344 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.12□□□□□ -2.43
LIM2P55344 RNU6-865P-201ENST00000364772 107 ntBASIC-0.12□□□□□ -2.43
LIM2P55344 MIR593-201ENST00000384856 100 ntBASIC-0.12□□□□□ -2.43
LIM2P55344 RNU7-197P-201ENST00000458836 62 ntBASIC-0.12□□□□□ -2.43
LIM2P55344 RNU7-74P-201ENST00000459104 62 ntBASIC-0.12□□□□□ -2.43
LIM2P55344 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.12□□□□□ -2.43
LIM2P55344 MIR3121-201ENST00000579680 77 ntBASIC-0.12□□□□□ -2.43
LIM2P55344 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.13□□□□□ -2.43
LIM2P55344 RNU6-170P-201ENST00000362832 104 ntBASIC-0.13□□□□□ -2.43
LIM2P55344 RNU6-509P-201ENST00000363519 107 ntBASIC-0.13□□□□□ -2.43
LIM2P55344 SNORD63B-201ENST00000411005 70 ntBASIC-0.13□□□□□ -2.43
LIM2P55344 BX276092.1-201ENST00000427368 251 ntBASIC-0.13□□□□□ -2.43
LIM2P55344 MIR376B-201ENST00000614515 100 ntBASIC-0.13□□□□□ -2.43
LIM2P55344 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 RNU4-11P-201ENST00000365287 132 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 MIR329-2-201ENST00000385029 84 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 RNU6-138P-201ENST00000515952 107 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 AC087741.2-201ENST00000619415 172 ntBASIC-0.14□□□□□ -2.43
LIM2P55344 SNORD115-19-201ENST00000363098 82 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 SNORD115-18-201ENST00000363293 82 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 SNORD115-17-201ENST00000364612 82 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 RNU7-165P-201ENST00000458864 60 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 RNU7-159P-201ENST00000459284 62 ntBASIC-0.15□□□□□ -2.43
LIM2P55344 SNORA81.3-201ENST00000517283 198 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms