Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6-1194P-201ENST00000516208 104 ntBASIC0.64□□□□□ -2.31
NR1H2P55055 MIR1273G-201ENST00000577677 100 ntBASIC0.64□□□□□ -2.31
NR1H2P55055 MIR101-2-201ENST00000362195 79 ntBASIC0.63□□□□□ -2.31
NR1H2P55055 Y_RNA.71-201ENST00000362892 104 ntBASIC0.63□□□□□ -2.31
NR1H2P55055 RNU6-865P-201ENST00000364772 107 ntBASIC0.63□□□□□ -2.31
NR1H2P55055 Y_RNA.328-201ENST00000365208 113 ntBASIC0.63□□□□□ -2.31
NR1H2P55055 RNU6-291P-201ENST00000384720 107 ntBASIC0.63□□□□□ -2.31
NR1H2P55055 RNU6-679P-201ENST00000391003 106 ntBASIC0.63□□□□□ -2.31
NR1H2P55055 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
NR1H2P55055 MIR3678-201ENST00000578455 94 ntBASIC0.63□□□□□ -2.31
NR1H2P55055 MIR1255B1-201ENST00000636325 63 ntBASIC0.63□□□□□ -2.31
NR1H2P55055 Y_RNA.32-201ENST00000362589 110 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 RNY4P6-201ENST00000363667 96 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 MIR644A-201ENST00000385262 94 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 RN7SKP12-201ENST00000516275 143 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 RNU6-521P-201ENST00000516663 105 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 SNORA31.14-201ENST00000516728 116 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 MIR4500-201ENST00000579472 76 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 uc_338.16-201ENST00000621804 95 ntBASIC0.62□□□□□ -2.31
NR1H2P55055 RNU6-429P-201ENST00000384582 108 ntBASIC0.61□□□□□ -2.31
NR1H2P55055 MIR376B-201ENST00000614515 100 ntBASIC0.61□□□□□ -2.31
NR1H2P55055 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
NR1H2P55055 AP001362.1-201ENST00000625165 124 ntBASIC0.61□□□□□ -2.31
NR1H2P55055 Y_RNA.127-201ENST00000363386 109 ntBASIC0.6□□□□□ -2.31
NR1H2P55055 Y_RNA.174-201ENST00000363781 105 ntBASIC0.6□□□□□ -2.31
NR1H2P55055 Y_RNA.344-201ENST00000365381 112 ntBASIC0.6□□□□□ -2.31
NR1H2P55055 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
NR1H2P55055 TMSB4XP3-201ENST00000445144 114 ntBASIC0.6□□□□□ -2.31
NR1H2P55055 RNU6-469P-201ENST00000516253 101 ntBASIC0.6□□□□□ -2.31
NR1H2P55055 RNU6-659P-201ENST00000516454 104 ntBASIC0.6□□□□□ -2.31
NR1H2P55055 MIR3914-2-201ENST00000637339 95 ntBASIC0.6□□□□□ -2.31
NR1H2P55055 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
NR1H2P55055 Y_RNA.115-201ENST00000363272 98 ntBASIC0.59□□□□□ -2.31
NR1H2P55055 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
NR1H2P55055 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
NR1H2P55055 SNORA7.5-201ENST00000410672 110 ntBASIC0.59□□□□□ -2.31
NR1H2P55055 Y_RNA.712-201ENST00000517011 92 ntBASIC0.59□□□□□ -2.31
NR1H2P55055 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 Y_RNA.56-201ENST00000362798 112 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 RNA5SP245-201ENST00000364239 121 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 SNORD116-14-201ENST00000383894 92 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 SNORD116-17-201ENST00000383929 92 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 SNORD116-15-201ENST00000384445 92 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 RNU6-959P-201ENST00000384671 107 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 SNORD116-19-201ENST00000384729 92 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 MIR34C-201ENST00000384831 77 ntBASIC0.58□□□□□ -2.32
NR1H2P55055 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.58□□□□□ -2.32
NR1H2P55055 SNORA63.5-201ENST00000363548 123 ntBASIC0.57□□□□□ -2.32
NR1H2P55055 RNU4-67P-201ENST00000364569 141 ntBASIC0.57□□□□□ -2.32
NR1H2P55055 RNA5SP193-201ENST00000410353 107 ntBASIC0.57□□□□□ -2.32
NR1H2P55055 Y_RNA.649-201ENST00000459077 103 ntBASIC0.57□□□□□ -2.32
NR1H2P55055 RNU6-229P-201ENST00000516614 102 ntBASIC0.57□□□□□ -2.32
NR1H2P55055 RNA5SP94-201ENST00000516917 108 ntBASIC0.57□□□□□ -2.32
NR1H2P55055 RNA5SP330-201ENST00000517096 96 ntBASIC0.57□□□□□ -2.32
NR1H2P55055 RNU6-363P-201ENST00000362895 105 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 Y_RNA.360-201ENST00000365512 102 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 Y_RNA.362-201ENST00000365518 110 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 RNU6-81P-201ENST00000365608 104 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 Y_RNA.567-201ENST00000384736 106 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 AL603908.1-201ENST00000406098 201 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 BX276092.1-201ENST00000427368 251 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 RNU6-1333P-201ENST00000516162 93 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 MIR548H5-201ENST00000580314 60 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 AC243829.3-201ENST00000622177 108 ntBASIC0.56□□□□□ -2.32
NR1H2P55055 Y_RNA.155-201ENST00000363632 101 ntBASIC0.55□□□□□ -2.32
NR1H2P55055 SNORD18A-201ENST00000363753 72 ntBASIC0.55□□□□□ -2.32
NR1H2P55055 Y_RNA.258-201ENST00000364613 105 ntBASIC0.55□□□□□ -2.32
NR1H2P55055 SNORD33.1-201ENST00000516213 88 ntBASIC0.55□□□□□ -2.32
NR1H2P55055 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
NR1H2P55055 U6.95-201ENST00000636931 70 ntBASIC0.55□□□□□ -2.32
NR1H2P55055 AC010487.4-201ENST00000637027 61 ntBASIC0.55□□□□□ -2.32
NR1H2P55055 AL512310.12-203ENST00000640543 90 ntBASIC0.55□□□□□ -2.32
NR1H2P55055 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 RNU6-409P-201ENST00000384114 104 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 Y_RNA.507-201ENST00000384500 99 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 MIR548A1-201ENST00000385041 97 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 RNU6-816P-201ENST00000390914 107 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 RNU6-1268P-201ENST00000391214 107 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 RNU6-1239P-201ENST00000391310 107 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 RNU6-135P-201ENST00000516769 101 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 AC007012.1-201ENST00000567192 175 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 MIR4711-201ENST00000578274 70 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 MIR924-201ENST00000638017 53 ntBASIC0.54□□□□□ -2.32
NR1H2P55055 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
NR1H2P55055 RNU6-716P-201ENST00000365621 103 ntBASIC0.53□□□□□ -2.32
NR1H2P55055 MIR635-201ENST00000384830 98 ntBASIC0.53□□□□□ -2.32
NR1H2P55055 MIR548A3-201ENST00000385297 97 ntBASIC0.53□□□□□ -2.32
NR1H2P55055 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
NR1H2P55055 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.53□□□□□ -2.32
NR1H2P55055 RNU7-10P-201ENST00000607194 63 ntBASIC0.53□□□□□ -2.32
NR1H2P55055 AL162726.3-218ENST00000636401 95 ntBASIC0.53□□□□□ -2.32
NR1H2P55055 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
NR1H2P55055 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
NR1H2P55055 RNU6-1229P-201ENST00000364295 107 ntBASIC0.52□□□□□ -2.33
NR1H2P55055 Y_RNA.261-201ENST00000364631 102 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 1509.4 ms