Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNU6-1079P-201ENST00000362861 110 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 SNORA48.1-201ENST00000390879 135 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 MIR1289-1-201ENST00000408836 144 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 RN7SKP223-201ENST00000410582 62 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 RNA5SP501-201ENST00000410990 112 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 MIR4672-201ENST00000583126 81 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 MTRNR2L2-201ENST00000604882 87 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGA2P52926 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMGA2P52926 AC023934.1-201ENST00000574529 2389 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 RNU6-664P-201ENST00000362381 107 ntBASIC1.63□□□□□ -2.15
HMGA2P52926 RNU1-52P-201ENST00000384190 164 ntBASIC1.63□□□□□ -2.15
HMGA2P52926 Y_RNA.510-201ENST00000384511 114 ntBASIC1.63□□□□□ -2.15
HMGA2P52926 MIR29C-201ENST00000385231 88 ntBASIC1.63□□□□□ -2.15
HMGA2P52926 MIR653-201ENST00000385279 96 ntBASIC1.63□□□□□ -2.15
HMGA2P52926 RNU6-1165P-201ENST00000410119 107 ntBASIC1.63□□□□□ -2.15
HMGA2P52926 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGA2P52926 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGA2P52926 MIR194-1-201ENST00000384892 85 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 SNORD41-201ENST00000386967 70 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 SNORD100-201ENST00000408573 76 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 AC097510.1-201ENST00000510945 133 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 RNA5SP182-201ENST00000516064 82 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 MIR514B-201ENST00000516774 80 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 MIR3122-201ENST00000577243 73 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 AC026271.5-201ENST00000577873 130 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 AL449363.1-201ENST00000617815 186 ntBASIC1.62□□□□□ -2.15
HMGA2P52926 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
HMGA2P52926 SNORA25.3-201ENST00000363205 127 ntBASIC1.61□□□□□ -2.15
HMGA2P52926 Y_RNA.536-201ENST00000384621 113 ntBASIC1.61□□□□□ -2.15
HMGA2P52926 AL096861.1-201ENST00000610899 123 ntBASIC1.61□□□□□ -2.15
HMGA2P52926 MIR8053-201ENST00000613344 75 ntBASIC1.61□□□□□ -2.15
HMGA2P52926 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMGA2P52926 Y_RNA.239-201ENST00000364444 113 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 SNORA6-201ENST00000384033 151 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 MIR518A2-201ENST00000384966 87 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 SNORA3.2-201ENST00000408221 125 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 RNA5SP100-201ENST00000410903 110 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 RNA5SP59-201ENST00000410922 110 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 RNU6-1054P-201ENST00000411293 104 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGA2P52926 AC013244.2-201ENST00000603396 103 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 AC092634.7-201ENST00000621022 103 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.6□□□□□ -2.15
HMGA2P52926 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMGA2P52926 SNORD101-201ENST00000384027 73 ntBASIC1.59□□□□□ -2.15
HMGA2P52926 MIR519A1-201ENST00000385257 85 ntBASIC1.59□□□□□ -2.15
HMGA2P52926 RPS27P16-201ENST00000425758 201 ntBASIC1.59□□□□□ -2.15
HMGA2P52926 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMGA2P52926 RNU6-1260P-201ENST00000362944 107 ntBASIC1.58□□□□□ -2.16
HMGA2P52926 RNU6-382P-201ENST00000365181 106 ntBASIC1.58□□□□□ -2.16
HMGA2P52926 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
HMGA2P52926 RNA5SP95-201ENST00000410319 137 ntBASIC1.58□□□□□ -2.16
HMGA2P52926 RPL23AP42-201ENST00000471152 471 ntBASIC1.58□□□□□ -2.16
HMGA2P52926 AP003716.2-201ENST00000528260 108 ntBASIC1.58□□□□□ -2.16
HMGA2P52926 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGA2P52926 MIR3616-201ENST00000584070 92 ntBASIC1.58□□□□□ -2.16
HMGA2P52926 AC069503.3-201ENST00000618674 145 ntBASIC1.58□□□□□ -2.16
HMGA2P52926 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMGA2P52926 RNU6-654P-201ENST00000364373 107 ntBASIC1.57□□□□□ -2.16
HMGA2P52926 RNA5SP192-201ENST00000364404 120 ntBASIC1.57□□□□□ -2.16
HMGA2P52926 RNU7-62P-201ENST00000458856 62 ntBASIC1.57□□□□□ -2.16
HMGA2P52926 snoU13.21-201ENST00000459368 105 ntBASIC1.57□□□□□ -2.16
HMGA2P52926 Y_RNA.809-201ENST00000516058 95 ntBASIC1.57□□□□□ -2.16
HMGA2P52926 RNA5SP137-201ENST00000516833 135 ntBASIC1.57□□□□□ -2.16
HMGA2P52926 SNORA31.17-201ENST00000516953 127 ntBASIC1.57□□□□□ -2.16
HMGA2P52926 MIR6516-201ENST00000630554 81 ntBASIC1.57□□□□□ -2.16
HMGA2P52926 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
HMGA2P52926 RNU4-58P-201ENST00000363192 141 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 RNU1-36P-201ENST00000365130 165 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 MIR451A-201ENST00000385059 72 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HMGA2P52926 AL161935.2-201ENST00000414627 60 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 RPL30P7-201ENST00000479312 323 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 SNORD111.1-201ENST00000516421 86 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 RNA5SP481-201ENST00000516814 122 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.56□□□□□ -2.16
HMGA2P52926 RNY4P3-201ENST00000365254 95 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 MIR1185-1-201ENST00000408598 86 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 AC003989.2-201ENST00000440224 169 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 AL691482.2-201ENST00000457453 84 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 RNU6-1265P-201ENST00000516342 103 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 Y_RNA.697-201ENST00000516776 113 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 MIR466-201ENST00000580653 84 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 MIR4264-201ENST00000583520 66 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 MIR4773-1-201ENST00000637203 78 ntBASIC1.55□□□□□ -2.16
HMGA2P52926 RNU6-1123P-201ENST00000362347 106 ntBASIC1.54□□□□□ -2.16
HMGA2P52926 RNA5SP245-201ENST00000364239 121 ntBASIC1.54□□□□□ -2.16
HMGA2P52926 Y_RNA.375-201ENST00000365625 101 ntBASIC1.54□□□□□ -2.16
HMGA2P52926 MT-TF-201ENST00000387314 71 ntBASIC1.54□□□□□ -2.16
HMGA2P52926 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HMGA2P52926 AC004965.1-201ENST00000413033 213 ntBASIC1.54□□□□□ -2.16
HMGA2P52926 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGA2P52926 DEFB122-202ENST00000569013 197 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms