Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SNORA8.2-201ENST00000384372 139 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 RNU6-1104P-201ENST00000384723 104 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 MIR206-201ENST00000384872 86 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 MIR518A1-201ENST00000385068 85 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 RNU6-1321P-201ENST00000390905 107 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 MIR1263-201ENST00000408324 86 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 RNU7-48P-201ENST00000458875 63 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 RNU7-2P-201ENST00000516096 62 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 MIR548H5-201ENST00000580314 60 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 Y_RNA.30-201ENST00000362572 97 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 RNU6-1099P-201ENST00000363533 107 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 AL158147.1-201ENST00000443970 75 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 MIR1270-201ENST00000459320 83 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 RNU7-200P-201ENST00000516105 62 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 RNU6-426P-201ENST00000516464 97 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 MIR4500-201ENST00000579472 76 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 MIR4639-201ENST00000584938 69 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 AP001362.1-201ENST00000625165 124 ntBASIC0.28□□□□□ -2.36
EFNA3P52797 Y_RNA.198-201ENST00000364013 98 ntBASIC0.27□□□□□ -2.37
EFNA3P52797 Y_RNA.294-201ENST00000364916 102 ntBASIC0.27□□□□□ -2.37
EFNA3P52797 SNORD115-35-201ENST00000365122 82 ntBASIC0.27□□□□□ -2.37
EFNA3P52797 RNU6-616P-201ENST00000384353 107 ntBASIC0.27□□□□□ -2.37
EFNA3P52797 RNA5SP227-201ENST00000516184 113 ntBASIC0.27□□□□□ -2.37
EFNA3P52797 RNA5SP268-201ENST00000516828 124 ntBASIC0.27□□□□□ -2.37
EFNA3P52797 RNU6-1212P-201ENST00000517023 104 ntBASIC0.27□□□□□ -2.37
EFNA3P52797 AC138869.1-201ENST00000568623 124 ntBASIC0.27□□□□□ -2.37
EFNA3P52797 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 Y_RNA.328-201ENST00000365208 113 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 SNORA40-201ENST00000388090 126 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 RNA5SP272-201ENST00000516095 111 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 SCARNA16.5-201ENST00000517114 183 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 IGKV1-22-201ENST00000524313 326 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 AL109933.3-201ENST00000619095 188 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 AC091304.10-201ENST00000641554 121 ntBASIC0.26□□□□□ -2.37
EFNA3P52797 SNORA63.5-201ENST00000363548 123 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 Y_RNA.374-201ENST00000365606 101 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 RNU6-209P-201ENST00000384118 107 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 Y_RNA.528-201ENST00000384575 108 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 SNORD28-201ENST00000384706 75 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 MIR635-201ENST00000384830 98 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 SUMO1P3-201ENST00000439961 304 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 RNU6-863P-201ENST00000515989 104 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 RNU6-1061P-201ENST00000516530 99 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 RNA5SP47-201ENST00000517230 109 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 AC087741.2-201ENST00000619415 172 ntBASIC0.25□□□□□ -2.37
EFNA3P52797 Y_RNA.68-201ENST00000362881 102 ntBASIC0.24□□□□□ -2.37
EFNA3P52797 SNORA36.1-201ENST00000363424 132 ntBASIC0.24□□□□□ -2.37
EFNA3P52797 RNA5SP62-201ENST00000363457 110 ntBASIC0.24□□□□□ -2.37
EFNA3P52797 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
EFNA3P52797 RNY1P5-201ENST00000383890 115 ntBASIC0.24□□□□□ -2.37
EFNA3P52797 SNORD38.2-201ENST00000384470 69 ntBASIC0.24□□□□□ -2.37
EFNA3P52797 SNRPGP12-201ENST00000449481 213 ntBASIC0.24□□□□□ -2.37
EFNA3P52797 AC244669.1-204ENST00000621564 178 ntBASIC0.24□□□□□ -2.37
EFNA3P52797 RNU6-235P-201ENST00000362644 107 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 Y_RNA.49-201ENST00000362714 112 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 SNORD115-19-201ENST00000363098 82 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 SNORD115-18-201ENST00000363293 82 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 Y_RNA.127-201ENST00000363386 109 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 SNORD115-24-201ENST00000363528 82 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 RNA5SP245-201ENST00000364239 121 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 SNORD115-17-201ENST00000364612 82 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 Y_RNA.280-201ENST00000364765 112 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 MIR539-201ENST00000365690 78 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 Y_RNA.568-201ENST00000384742 113 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 MIR548L-201ENST00000408303 86 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 MIR548I2-201ENST00000408348 149 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 RNU2-59P-201ENST00000410482 191 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 MTND4LP9-201ENST00000427694 174 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 RNU6-255P-201ENST00000516957 105 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 MIR6718-201ENST00000616153 80 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 MIR6828-201ENST00000636181 60 ntBASIC0.23□□□□□ -2.37
EFNA3P52797 AC244505.6-201ENST00000452829 130 ntBASIC0.22□□□□□ -2.37
EFNA3P52797 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
EFNA3P52797 RNU6-781P-201ENST00000516377 101 ntBASIC0.22□□□□□ -2.37
EFNA3P52797 RNU6-521P-201ENST00000516663 105 ntBASIC0.22□□□□□ -2.37
EFNA3P52797 AC025166.1-201ENST00000612411 163 ntBASIC0.22□□□□□ -2.37
EFNA3P52797 MIR376B-201ENST00000614515 100 ntBASIC0.22□□□□□ -2.37
EFNA3P52797 RNA5SP257-201ENST00000363023 116 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 RNY4P6-201ENST00000363667 96 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 Y_RNA.178-201ENST00000363832 102 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 RNU4-67P-201ENST00000364569 141 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 Y_RNA.360-201ENST00000365512 102 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 MIR548D2-201ENST00000384955 97 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 MT-TI-201ENST00000387365 69 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 BX276092.1-201ENST00000427368 251 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 RNU6-1211P-201ENST00000459179 105 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 RNU6-346P-201ENST00000516288 111 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 MIR7107-201ENST00000611489 80 ntBASIC0.21□□□□□ -2.38
EFNA3P52797 SNORD58C-201ENST00000365223 64 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 Y_RNA.346-201ENST00000365385 112 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 Y_RNA.506-201ENST00000384494 102 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 RNU6-907P-201ENST00000390924 102 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 RNU6-1307P-201ENST00000391012 103 ntBASIC0.2□□□□□ -2.38
EFNA3P52797 AC073261.1-201ENST00000429409 121 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 380.3 ms