Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNU4-67P-201ENST00000364569 141 ntBASIC0.14□□□□□ -2.39
LIG4P49917 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
LIG4P49917 MIR4752-201ENST00000579672 72 ntBASIC0.14□□□□□ -2.39
LIG4P49917 AL137067.1-201ENST00000615933 120 ntBASIC0.14□□□□□ -2.39
LIG4P49917 AC087741.2-201ENST00000619415 172 ntBASIC0.14□□□□□ -2.39
LIG4P49917 Y_RNA.778-201ENST00000620203 90 ntBASIC0.14□□□□□ -2.39
LIG4P49917 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.14□□□□□ -2.39
LIG4P49917 Y_RNA.49-201ENST00000362714 112 ntBASIC0.13□□□□□ -2.39
LIG4P49917 RNU6-151P-201ENST00000364158 107 ntBASIC0.13□□□□□ -2.39
LIG4P49917 RNU6-726P-201ENST00000364680 107 ntBASIC0.13□□□□□ -2.39
LIG4P49917 Y_RNA.294-201ENST00000364916 102 ntBASIC0.13□□□□□ -2.39
LIG4P49917 Y_RNA.423-201ENST00000384057 113 ntBASIC0.13□□□□□ -2.39
LIG4P49917 Y_RNA.448-201ENST00000384185 108 ntBASIC0.13□□□□□ -2.39
LIG4P49917 RNU6-804P-201ENST00000384286 107 ntBASIC0.13□□□□□ -2.39
LIG4P49917 RNU6-616P-201ENST00000384353 107 ntBASIC0.13□□□□□ -2.39
LIG4P49917 RNU6-429P-201ENST00000384582 108 ntBASIC0.13□□□□□ -2.39
LIG4P49917 TRAJ51-201ENST00000504127 63 ntBASIC0.13□□□□□ -2.39
LIG4P49917 Y_RNA.127-201ENST00000363386 109 ntBASIC0.12□□□□□ -2.39
LIG4P49917 RNA5SP403-201ENST00000363598 108 ntBASIC0.12□□□□□ -2.39
LIG4P49917 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
LIG4P49917 RNA5SP63-201ENST00000391225 112 ntBASIC0.12□□□□□ -2.39
LIG4P49917 RNU6-735P-201ENST00000410612 107 ntBASIC0.12□□□□□ -2.39
LIG4P49917 RNU7-48P-201ENST00000458875 63 ntBASIC0.12□□□□□ -2.39
LIG4P49917 MTND5P41-201ENST00000517498 206 ntBASIC0.12□□□□□ -2.39
LIG4P49917 Y_RNA.773-201ENST00000607168 90 ntBASIC0.12□□□□□ -2.39
LIG4P49917 MIR376B-201ENST00000614515 100 ntBASIC0.12□□□□□ -2.39
LIG4P49917 FTX_2.1-201ENST00000618816 94 ntBASIC0.12□□□□□ -2.39
LIG4P49917 SNORA9.1-201ENST00000362412 131 ntBASIC0.11□□□□□ -2.39
LIG4P49917 SNORD115-24-201ENST00000363528 82 ntBASIC0.11□□□□□ -2.39
LIG4P49917 Y_RNA.258-201ENST00000364613 105 ntBASIC0.11□□□□□ -2.39
LIG4P49917 RNU6-915P-201ENST00000364943 103 ntBASIC0.11□□□□□ -2.39
LIG4P49917 Y_RNA.398-201ENST00000383952 99 ntBASIC0.11□□□□□ -2.39
LIG4P49917 SNORD77B-201ENST00000391112 67 ntBASIC0.11□□□□□ -2.39
LIG4P49917 RNU7-2P-201ENST00000516096 62 ntBASIC0.11□□□□□ -2.39
LIG4P49917 AC138869.1-201ENST00000568623 124 ntBASIC0.11□□□□□ -2.39
LIG4P49917 MIR3144-201ENST00000579460 79 ntBASIC0.11□□□□□ -2.39
LIG4P49917 MIR548H5-201ENST00000580314 60 ntBASIC0.11□□□□□ -2.39
LIG4P49917 AL109933.3-201ENST00000619095 188 ntBASIC0.11□□□□□ -2.39
LIG4P49917 AL162376.1-201ENST00000624117 175 ntBASIC0.11□□□□□ -2.39
LIG4P49917 RNU6-161P-201ENST00000363051 106 ntBASIC0.1□□□□□ -2.39
LIG4P49917 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
LIG4P49917 Y_RNA.150-201ENST00000363562 102 ntBASIC0.1□□□□□ -2.39
LIG4P49917 SNORD115-35-201ENST00000365122 82 ntBASIC0.1□□□□□ -2.39
LIG4P49917 RNU6-449P-201ENST00000383914 107 ntBASIC0.1□□□□□ -2.39
LIG4P49917 SNORD116-18-201ENST00000383961 92 ntBASIC0.1□□□□□ -2.39
LIG4P49917 MIR569-201ENST00000385228 96 ntBASIC0.1□□□□□ -2.39
LIG4P49917 BX276092.1-201ENST00000427368 251 ntBASIC0.1□□□□□ -2.39
LIG4P49917 AL353813.1-201ENST00000440700 253 ntBASIC0.1□□□□□ -2.39
LIG4P49917 RNU5E-3P-201ENST00000515913 68 ntBASIC0.1□□□□□ -2.39
LIG4P49917 SNORD115-19-201ENST00000363098 82 ntBASIC0.09□□□□□ -2.4
LIG4P49917 Y_RNA.114-201ENST00000363265 113 ntBASIC0.09□□□□□ -2.4
LIG4P49917 SNORD115-18-201ENST00000363293 82 ntBASIC0.09□□□□□ -2.4
LIG4P49917 SNORD115-17-201ENST00000364612 82 ntBASIC0.09□□□□□ -2.4
LIG4P49917 Y_RNA.328-201ENST00000365208 113 ntBASIC0.09□□□□□ -2.4
LIG4P49917 RNU6-886P-201ENST00000384319 105 ntBASIC0.09□□□□□ -2.4
LIG4P49917 MIR4500-201ENST00000579472 76 ntBASIC0.09□□□□□ -2.4
LIG4P49917 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
LIG4P49917 AP001340.1-201ENST00000624405 217 ntBASIC0.09□□□□□ -2.4
LIG4P49917 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
LIG4P49917 MIR34C-201ENST00000384831 77 ntBASIC0.08□□□□□ -2.4
LIG4P49917 SNORD41.1-201ENST00000391000 69 ntBASIC0.08□□□□□ -2.4
LIG4P49917 RNU6-848P-201ENST00000515948 107 ntBASIC0.08□□□□□ -2.4
LIG4P49917 RN7SKP19-201ENST00000516016 252 ntBASIC0.08□□□□□ -2.4
LIG4P49917 RNA5SP272-201ENST00000516095 111 ntBASIC0.08□□□□□ -2.4
LIG4P49917 RNU6-617P-201ENST00000516147 107 ntBASIC0.08□□□□□ -2.4
LIG4P49917 RNU6-473P-201ENST00000516164 107 ntBASIC0.08□□□□□ -2.4
LIG4P49917 RNU6-1049P-201ENST00000516414 107 ntBASIC0.08□□□□□ -2.4
LIG4P49917 RNU7-10P-201ENST00000607194 63 ntBASIC0.08□□□□□ -2.4
LIG4P49917 SNORA70.25-201ENST00000612741 95 ntBASIC0.08□□□□□ -2.4
LIG4P49917 MIR1255B1-201ENST00000636325 63 ntBASIC0.08□□□□□ -2.4
LIG4P49917 Y_RNA.8-201ENST00000362353 102 ntBASIC0.07□□□□□ -2.4
LIG4P49917 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
LIG4P49917 Y_RNA.420-201ENST00000384043 110 ntBASIC0.07□□□□□ -2.4
LIG4P49917 MIR519A1-201ENST00000385257 85 ntBASIC0.07□□□□□ -2.4
LIG4P49917 MIR760-201ENST00000390220 80 ntBASIC0.07□□□□□ -2.4
LIG4P49917 RNU6-127P-201ENST00000390897 107 ntBASIC0.07□□□□□ -2.4
LIG4P49917 RNU7-129P-201ENST00000516128 62 ntBASIC0.07□□□□□ -2.4
LIG4P49917 RNU6-781P-201ENST00000516377 101 ntBASIC0.07□□□□□ -2.4
LIG4P49917 AP001362.1-201ENST00000625165 124 ntBASIC0.07□□□□□ -2.4
LIG4P49917 AC021753.1-201ENST00000635724 168 ntBASIC0.07□□□□□ -2.4
LIG4P49917 Y_RNA.98-201ENST00000363109 102 ntBASIC0.06□□□□□ -2.4
LIG4P49917 RNU6-756P-201ENST00000383997 107 ntBASIC0.06□□□□□ -2.4
LIG4P49917 MIR501-201ENST00000390204 84 ntBASIC0.06□□□□□ -2.4
LIG4P49917 MIR548L-201ENST00000408303 86 ntBASIC0.06□□□□□ -2.4
LIG4P49917 RNU7-106P-201ENST00000459514 67 ntBASIC0.06□□□□□ -2.4
LIG4P49917 RNU6-1234P-201ENST00000516877 103 ntBASIC0.06□□□□□ -2.4
LIG4P49917 RNU6-1006P-201ENST00000516998 103 ntBASIC0.06□□□□□ -2.4
LIG4P49917 MIR548X2-201ENST00000579776 100 ntBASIC0.06□□□□□ -2.4
LIG4P49917 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
LIG4P49917 Y_RNA.215-201ENST00000364204 112 ntBASIC0.05□□□□□ -2.4
LIG4P49917 RNA5SP128-201ENST00000365305 116 ntBASIC0.05□□□□□ -2.4
LIG4P49917 Y_RNA.362-201ENST00000365518 110 ntBASIC0.05□□□□□ -2.4
LIG4P49917 Y_RNA.400-201ENST00000383963 111 ntBASIC0.05□□□□□ -2.4
LIG4P49917 MIR599-201ENST00000385069 95 ntBASIC0.05□□□□□ -2.4
LIG4P49917 RNU6-269P-201ENST00000391077 97 ntBASIC0.05□□□□□ -2.4
LIG4P49917 AC097635.1-201ENST00000450678 155 ntBASIC0.05□□□□□ -2.4
LIG4P49917 RNU7-195P-201ENST00000458793 62 ntBASIC0.05□□□□□ -2.4
LIG4P49917 RNU7-104P-201ENST00000459398 79 ntBASIC0.05□□□□□ -2.4
LIG4P49917 RPL39P34-201ENST00000477141 156 ntBASIC0.05□□□□□ -2.4
LIG4P49917 Y_RNA.692-201ENST00000516627 105 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms