Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU4-71P-201ENST00000516258 113 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 RNU6-111P-201ENST00000517179 105 ntBASIC-0.18□□□□□ -2.44
CXCL12P48061 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 RNY1P11-201ENST00000363759 113 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 RNU6-449P-201ENST00000383914 107 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 MIR599-201ENST00000385069 95 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 SNORA75.5-201ENST00000391291 81 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 RNA5SP163-201ENST00000410304 99 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 BX276092.1-201ENST00000427368 251 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 RNU7-48P-201ENST00000458875 63 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 RNU7-159P-201ENST00000459284 62 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 MIR3925-201ENST00000584674 77 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 RNU7-10P-201ENST00000607194 63 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 uc_338.28-201ENST00000612082 187 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 MIR6844-201ENST00000637122 62 ntBASIC-0.19□□□□□ -2.44
CXCL12P48061 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.2□□□□□ -2.44
CXCL12P48061 RNU7-165P-201ENST00000458864 60 ntBASIC-0.2□□□□□ -2.44
CXCL12P48061 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.2□□□□□ -2.44
CXCL12P48061 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.2□□□□□ -2.44
CXCL12P48061 MIR4677-201ENST00000584153 80 ntBASIC-0.2□□□□□ -2.44
CXCL12P48061 AC062037.2-201ENST00000610137 73 ntBASIC-0.2□□□□□ -2.44
CXCL12P48061 U7.6-201ENST00000610841 64 ntBASIC-0.2□□□□□ -2.44
CXCL12P48061 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.2□□□□□ -2.44
CXCL12P48061 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 RNU6-312P-201ENST00000364629 107 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 MIR1302-3-201ENST00000408128 138 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 AC009779.6-201ENST00000603972 165 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 AL627230.5-201ENST00000619807 58 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 AC073869.9-201ENST00000641610 120 ntBASIC-0.21□□□□□ -2.44
CXCL12P48061 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.22□□□□□ -2.44
CXCL12P48061 RNU6-309P-201ENST00000364573 106 ntBASIC-0.22□□□□□ -2.44
CXCL12P48061 SNORA20.1-201ENST00000364790 130 ntBASIC-0.22□□□□□ -2.44
CXCL12P48061 SNORD77B-201ENST00000391112 67 ntBASIC-0.22□□□□□ -2.44
CXCL12P48061 AC097635.1-201ENST00000450678 155 ntBASIC-0.22□□□□□ -2.44
CXCL12P48061 AC022559.1-201ENST00000520905 205 ntBASIC-0.22□□□□□ -2.44
CXCL12P48061 NAMPTP3-201ENST00000569273 224 ntBASIC-0.22□□□□□ -2.44
CXCL12P48061 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 RNU6-616P-201ENST00000384353 107 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 MIR604-201ENST00000384880 94 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 SNORD110-201ENST00000408189 75 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 AC006210.1-201ENST00000424882 111 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 AL118496.2-201ENST00000448300 230 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 RNU7-195P-201ENST00000458793 62 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 RNA5SP484-201ENST00000458857 111 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 RNU7-2P-201ENST00000516096 62 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 RNU6-327P-201ENST00000516270 127 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 RNU6-180P-201ENST00000516697 61 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 MIR4645-201ENST00000583158 77 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 AP001362.1-201ENST00000625165 124 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 MIR3658-201ENST00000636291 56 ntBASIC-0.23□□□□□ -2.45
CXCL12P48061 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.23□□□□□ -2.45
CXCL12P48061 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 SNORA32.1-201ENST00000364514 115 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 RNU6-865P-201ENST00000364772 107 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 SNORD18B-201ENST00000365659 72 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 MIR548I2-201ENST00000408348 149 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 SNORD63B-201ENST00000411005 70 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 HMGN2P22-201ENST00000427588 175 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 MIR3646-201ENST00000578301 84 ntBASIC-0.24□□□□□ -2.45
CXCL12P48061 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 RNA5SP368-201ENST00000364298 116 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 MIR106A-201ENST00000384870 81 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 SNORD37.2-201ENST00000391075 66 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 AC104692.1-201ENST00000472406 90 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 RNY4P20-201ENST00000516678 93 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 MIR3920-201ENST00000581751 86 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 AC108081.1-201ENST00000604358 221 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 MIR376B-201ENST00000614515 100 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 MIR1295B-201ENST00000636144 60 ntBASIC-0.25□□□□□ -2.45
CXCL12P48061 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.26□□□□□ -2.45
CXCL12P48061 RNU6-239P-201ENST00000390990 99 ntBASIC-0.26□□□□□ -2.45
CXCL12P48061 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.26□□□□□ -2.45
CXCL12P48061 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.26□□□□□ -2.45
CXCL12P48061 AL137067.1-201ENST00000615933 120 ntBASIC-0.26□□□□□ -2.45
CXCL12P48061 U4.1-201ENST00000620349 87 ntBASIC-0.26□□□□□ -2.45
CXCL12P48061 MIR6514-201ENST00000622549 70 ntBASIC-0.26□□□□□ -2.45
CXCL12P48061 RNU6-509P-201ENST00000363519 107 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 SNORD114-15-201ENST00000364687 72 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 SNORD115-35-201ENST00000365122 82 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 RNU6-524P-201ENST00000384270 107 ntBASIC-0.27□□□□□ -2.45
CXCL12P48061 MIR519A1-201ENST00000385257 85 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms