Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 SNORA63.5-201ENST00000363548 123 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 Y_RNA.213-201ENST00000364178 111 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 RNU6-865P-201ENST00000364772 107 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 RNY1P2-201ENST00000364820 117 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 Y_RNA.343-201ENST00000365354 112 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 MIR518A1-201ENST00000385068 85 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 RNU7-2P-201ENST00000516096 62 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 RNU7-200P-201ENST00000516105 62 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 MIR3163-201ENST00000581592 73 ntBASIC0.32□□□□□ -2.36
TNFRSF4P43489 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
TNFRSF4P43489 SUMO1P3-201ENST00000439961 304 ntBASIC0.31□□□□□ -2.36
TNFRSF4P43489 MIR4500-201ENST00000579472 76 ntBASIC0.31□□□□□ -2.36
TNFRSF4P43489 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
TNFRSF4P43489 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
TNFRSF4P43489 Y_RNA.98-201ENST00000363109 102 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 RNU6-209P-201ENST00000384118 107 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 RNU6-429P-201ENST00000384582 108 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 AL158147.1-201ENST00000443970 75 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 RNU6-346P-201ENST00000516288 111 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 RNA5SP268-201ENST00000516828 124 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 RNU6-1212P-201ENST00000517023 104 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 TUG1_4.1-201ENST00000619464 181 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 AP001362.1-201ENST00000625165 124 ntBASIC0.3□□□□□ -2.36
TNFRSF4P43489 RNU6-235P-201ENST00000362644 107 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 RNA5SP257-201ENST00000363023 116 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 SNORA36.1-201ENST00000363424 132 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 RNA5SP245-201ENST00000364239 121 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 Y_RNA.528-201ENST00000384575 108 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 RNU6-1307P-201ENST00000391012 103 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 RNA5SP136-201ENST00000410906 107 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 RNA5SP227-201ENST00000516184 113 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 RNU6-781P-201ENST00000516377 101 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 RNU6-1061P-201ENST00000516530 99 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 RNU6-255P-201ENST00000516957 105 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 MIR548H5-201ENST00000580314 60 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 MIR4639-201ENST00000584938 69 ntBASIC0.29□□□□□ -2.36
TNFRSF4P43489 Y_RNA.56-201ENST00000362798 112 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 SNORD118-201ENST00000363593 134 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 Y_RNA.198-201ENST00000364013 98 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 Y_RNA.328-201ENST00000365208 113 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 SNORD28-201ENST00000384706 75 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 MT-TI-201ENST00000387365 69 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 SNORA40-201ENST00000388090 126 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 MTND4LP9-201ENST00000427694 174 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 SCARNA16.5-201ENST00000517114 183 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 RNU7-10P-201ENST00000607194 63 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 AC087741.2-201ENST00000619415 172 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 AC244669.1-204ENST00000621564 178 ntBASIC0.28□□□□□ -2.36
TNFRSF4P43489 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 Y_RNA.49-201ENST00000362714 112 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 Y_RNA.280-201ENST00000364765 112 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 SNORD115-35-201ENST00000365122 82 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 RNA5SP63-201ENST00000391225 112 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 BX276092.1-201ENST00000427368 251 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 RNA5SP47-201ENST00000517230 109 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 AC138869.1-201ENST00000568623 124 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 MIR7107-201ENST00000611489 80 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 MIR376B-201ENST00000614515 100 ntBASIC0.27□□□□□ -2.37
TNFRSF4P43489 Y_RNA.127-201ENST00000363386 109 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 SNORD115-24-201ENST00000363528 82 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 RNY1P5-201ENST00000383890 115 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 Y_RNA.568-201ENST00000384742 113 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 MIR635-201ENST00000384830 98 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 MIR548L-201ENST00000408303 86 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 RNU6-257P-201ENST00000410238 98 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 RNU6-1211P-201ENST00000459179 105 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 Y_RNA.773-201ENST00000607168 90 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 AC091304.10-201ENST00000641554 121 ntBASIC0.26□□□□□ -2.37
TNFRSF4P43489 SNORD115-19-201ENST00000363098 82 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 SNORD44.1-201ENST00000363202 61 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 SNORD115-18-201ENST00000363293 82 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 SNORD115-17-201ENST00000364612 82 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 SNORD58C-201ENST00000365223 64 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 Y_RNA.506-201ENST00000384494 102 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 RNU6-907P-201ENST00000390924 102 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 RNU6-735P-201ENST00000410612 107 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 Y_RNA.681-201ENST00000516445 113 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 RNU6-521P-201ENST00000516663 105 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 AC025166.1-201ENST00000612411 163 ntBASIC0.25□□□□□ -2.37
TNFRSF4P43489 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
TNFRSF4P43489 RNU6-1099P-201ENST00000363533 107 ntBASIC0.24□□□□□ -2.37
TNFRSF4P43489 MIR34C-201ENST00000384831 77 ntBASIC0.24□□□□□ -2.37
TNFRSF4P43489 MIR548D2-201ENST00000384955 97 ntBASIC0.24□□□□□ -2.37
TNFRSF4P43489 RNU7-104P-201ENST00000459398 79 ntBASIC0.24□□□□□ -2.37
TNFRSF4P43489 MIR6828-201ENST00000636181 60 ntBASIC0.24□□□□□ -2.37
TNFRSF4P43489 MIR1255B1-201ENST00000636325 63 ntBASIC0.24□□□□□ -2.37
TNFRSF4P43489 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 RNU4-67P-201ENST00000364569 141 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 SNORD38.2-201ENST00000384470 69 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 SNORA7.5-201ENST00000410672 110 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 AC073261.1-201ENST00000429409 121 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 AC244505.6-201ENST00000452829 130 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 RNU6-1234P-201ENST00000516877 103 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 MIR2909-201ENST00000617113 69 ntBASIC0.23□□□□□ -2.37
TNFRSF4P43489 MTND5P18-201ENST00000445624 1801 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms