Protein–RNA interactions for Protein: P35498

SCN1A, Sodium channel protein type 1 subunit alpha, humanhuman

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1AP35498 AC072026.1-201ENST00000605023 201 ntBASIC-0.1□□□□□ -2.43
SCN1AP35498 AC021753.1-201ENST00000635724 168 ntBASIC-0.1□□□□□ -2.43
SCN1AP35498 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 SNORA75.5-201ENST00000391291 81 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 AC108059.2-201ENST00000434626 151 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 AC244505.6-201ENST00000452829 130 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 RNU7-104P-201ENST00000459398 79 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 AC107027.2-201ENST00000512197 115 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 MIR3121-201ENST00000579680 77 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 RNA5SP128-201ENST00000365305 116 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 MIR1265-201ENST00000408444 86 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 RNU4-69P-201ENST00000410677 143 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 AL118496.2-201ENST00000448300 230 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 RN7SKP19-201ENST00000516016 252 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 MIR4645-201ENST00000583158 77 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 MIR4768-201ENST00000585270 74 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 uc_338.28-201ENST00000612082 187 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 SNORA70.25-201ENST00000612741 95 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 MIR499B-201ENST00000636498 73 ntBASIC-0.11□□□□□ -2.43
SCN1AP35498 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 SNORA32.3-201ENST00000384772 121 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 SNORD110-201ENST00000408189 75 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 MIR548I2-201ENST00000408348 149 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 SUMO1P3-201ENST00000439961 304 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 RNA5SP227-201ENST00000516184 113 ntBASIC-0.12□□□□□ -2.43
SCN1AP35498 SNORD115-35-201ENST00000365122 82 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 SNORD114-12-201ENST00000365400 75 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 RNU6-756P-201ENST00000383997 107 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 SNORA32-201ENST00000384072 121 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 RNU6-574P-201ENST00000384265 107 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 RNU6-291P-201ENST00000384720 107 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 RNU6-239P-201ENST00000390990 99 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 SNORD77B-201ENST00000391112 67 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 AL603914.1-201ENST00000401964 204 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 AC022559.1-201ENST00000520905 205 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 RNU6-865P-201ENST00000364772 107 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 MIR214-201ENST00000385214 110 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 SNORD41.1-201ENST00000391000 69 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 MIR376B-201ENST00000614515 100 ntBASIC-0.13□□□□□ -2.43
SCN1AP35498 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 RNU7-164P-201ENST00000459221 62 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 MIR3658-201ENST00000636291 56 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 RNU7-165P-201ENST00000458864 60 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 MIR3925-201ENST00000584674 77 ntBASIC-0.14□□□□□ -2.43
SCN1AP35498 RNU6-312P-201ENST00000364629 107 ntBASIC-0.15□□□□□ -2.43
SCN1AP35498 RNU6-196P-201ENST00000384315 107 ntBASIC-0.15□□□□□ -2.43
SCN1AP35498 SNORD38.2-201ENST00000384470 69 ntBASIC-0.15□□□□□ -2.43
SCN1AP35498 RNU6-735P-201ENST00000410612 107 ntBASIC-0.15□□□□□ -2.43
SCN1AP35498 RNU7-2P-201ENST00000516096 62 ntBASIC-0.15□□□□□ -2.43
SCN1AP35498 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.15□□□□□ -2.43
SCN1AP35498 RNU6-861P-201ENST00000516745 106 ntBASIC-0.15□□□□□ -2.43
SCN1AP35498 AC130289.1-201ENST00000577321 73 ntBASIC-0.15□□□□□ -2.43
SCN1AP35498 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.16□□□□□ -2.43
SCN1AP35498 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.16□□□□□ -2.43
SCN1AP35498 SNORD115-24-201ENST00000363528 82 ntBASIC-0.16□□□□□ -2.43
SCN1AP35498 MT-TG-201ENST00000387429 68 ntBASIC-0.16□□□□□ -2.43
SCN1AP35498 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.43
SCN1AP35498 RNU6-127P-201ENST00000390897 107 ntBASIC-0.16□□□□□ -2.43
SCN1AP35498 RNU6-111P-201ENST00000517179 105 ntBASIC-0.16□□□□□ -2.43
SCN1AP35498 AC007012.1-201ENST00000567192 175 ntBASIC-0.16□□□□□ -2.43
SCN1AP35498 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 MIR516A2-201ENST00000384888 90 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 MIR516A1-201ENST00000385033 90 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 MIR513C-201ENST00000401352 84 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 MTATP6P21-201ENST00000440681 189 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 RNU6-758P-201ENST00000516292 89 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 RNU6-388P-201ENST00000517012 105 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 RNU6-389P-201ENST00000517048 105 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 CR383656.4-201ENST00000546909 122 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 AC108081.1-201ENST00000604358 221 ntBASIC-0.16□□□□□ -2.44
SCN1AP35498 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.17□□□□□ -2.44
SCN1AP35498 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.17□□□□□ -2.44
SCN1AP35498 AL353621.2-201ENST00000605340 133 ntBASIC-0.17□□□□□ -2.44
SCN1AP35498 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.18□□□□□ -2.44
SCN1AP35498 SNORD115-19-201ENST00000363098 82 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 SNORD115-18-201ENST00000363293 82 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 SNORD115-17-201ENST00000364612 82 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 RNU6-652P-201ENST00000365488 107 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.18□□□□□ -2.44
SCN1AP35498 MT-TI-201ENST00000387365 69 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 255.6 ms