Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 SNORD77B-201ENST00000391112 67 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 BX276092.1-201ENST00000427368 251 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 AP001362.1-201ENST00000625165 124 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNU6-865P-201ENST00000364772 107 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 SNORA20.1-201ENST00000364790 130 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 MIR106A-201ENST00000384870 81 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 MIR519A1-201ENST00000385257 85 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 AL118496.2-201ENST00000448300 230 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNU7-2P-201ENST00000516096 62 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNU6-327P-201ENST00000516270 127 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 MIR3658-201ENST00000636291 56 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNA5SP257-201ENST00000363023 116 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 MIR548I2-201ENST00000408348 149 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 AC104692.1-201ENST00000472406 90 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.25□□□□□ -2.45
SHMT2P34897 MIR655-201ENST00000362159 97 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 RNU6-239P-201ENST00000390990 99 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 MIR876-201ENST00000401147 81 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 AC006210.1-201ENST00000424882 111 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 RNU7-121P-201ENST00000516604 62 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 RNY4P20-201ENST00000516678 93 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 AC022559.1-201ENST00000520905 205 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 AC009779.6-201ENST00000603972 165 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 U4.1-201ENST00000620349 87 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.26□□□□□ -2.45
SHMT2P34897 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNU4-84P-201ENST00000364200 139 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNU6-309P-201ENST00000364573 106 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNU6-616P-201ENST00000384353 107 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 AL603914.1-201ENST00000401964 204 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 SNORD63B-201ENST00000411005 70 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNA5SP484-201ENST00000458857 111 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 NAMPTP3-201ENST00000569273 224 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 MIR376B-201ENST00000614515 100 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 SNORA75.1-201ENST00000391130 148 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 SNORD110-201ENST00000408189 75 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 RNU7-195P-201ENST00000458793 62 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 AC130289.1-201ENST00000577321 73 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 MIR3920-201ENST00000581751 86 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 AC108081.1-201ENST00000604358 221 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 MIR6514-201ENST00000622549 70 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 RNU6-170P-201ENST00000362832 104 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 RNU6-509P-201ENST00000363519 107 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 SNORD18B-201ENST00000365659 72 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 CR383656.4-201ENST00000546909 122 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.29□□□□□ -2.46
SHMT2P34897 MIR6507-201ENST00000613630 70 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 RN7SL660P-201ENST00000614852 299 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 AL137067.1-201ENST00000615933 120 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 SNORD115-35-201ENST00000365122 82 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 SNORD114-12-201ENST00000365400 75 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 SNORD37.2-201ENST00000391075 66 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 AC244250.2-201ENST00000418731 148 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 RNU7-13P-201ENST00000516413 62 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.3□□□□□ -2.46
SHMT2P34897 MIR548AG2-201ENST00000581228 64 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 MIR4503-201ENST00000582187 83 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.3□□□□□ -2.46
SHMT2P34897 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNU6-694P-201ENST00000364071 147 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNU6-46P-201ENST00000383860 107 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNU6-571P-201ENST00000384128 107 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 MTND3P2-201ENST00000438452 342 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 AC109327.2-201ENST00000448339 378 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 AC072026.1-201ENST00000605023 201 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNA5SP205-201ENST00000364653 136 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 RNA5SP300-201ENST00000391197 107 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 SNORA25.13-201ENST00000516395 103 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 MTND5P40-201ENST00000559945 246 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 MIR148A-201ENST00000362215 68 ntBASIC-0.33□□□□□ -2.46
SHMT2P34897 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.33□□□□□ -2.46
SHMT2P34897 RNU6-811P-201ENST00000384069 107 ntBASIC-0.33□□□□□ -2.46
SHMT2P34897 RNU6-524P-201ENST00000384270 107 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms