Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 RNU6-713P-201ENST00000384761 107 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 RNU6-493P-201ENST00000391321 108 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 RNU6-985P-201ENST00000410182 104 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 snoU13.19-201ENST00000459148 104 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 AC021443.1-201ENST00000604478 211 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 AC011603.4-201ENST00000611325 277 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 uc_338.36-201ENST00000622331 158 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 RNU6-170P-201ENST00000362832 104 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 MIR519E-201ENST00000385075 84 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 MT-TW-201ENST00000387382 68 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 AL603914.1-201ENST00000401964 204 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 AC093423.1-201ENST00000440817 142 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 RNU7-164P-201ENST00000459221 62 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.63□□□□□ -2.51
SLC6A1P30531 AC020661.2-201ENST00000560114 134 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 AC138907.4-201ENST00000570107 226 ntBASIC-0.63□□□□□ -2.51
SLC6A1P30531 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.64□□□□□ -2.51
SLC6A1P30531 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.64□□□□□ -2.51
SLC6A1P30531 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.64□□□□□ -2.51
SLC6A1P30531 MIR181B2-201ENST00000385004 89 ntBASIC-0.64□□□□□ -2.51
SLC6A1P30531 HAR1A.1-201ENST00000459583 118 ntBASIC-0.64□□□□□ -2.51
SLC6A1P30531 MIR4432-201ENST00000581823 84 ntBASIC-0.64□□□□□ -2.51
SLC6A1P30531 AC069503.3-201ENST00000618674 145 ntBASIC-0.64□□□□□ -2.51
SLC6A1P30531 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 RNU7-106P-201ENST00000459514 67 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 RNU7-2P-201ENST00000516096 62 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 YWHAEP2-201ENST00000580066 112 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 MIR548AE1-201ENST00000583292 70 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 AC009779.6-201ENST00000603972 165 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 MIR376B-201ENST00000614515 100 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 uc_338.10-201ENST00000621872 182 ntBASIC-0.65□□□□□ -2.51
SLC6A1P30531 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.66□□□□□ -2.51
SLC6A1P30531 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 SNORD95.1-201ENST00000364099 68 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 RNU6-275P-201ENST00000364910 107 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 RNU6-480P-201ENST00000384332 107 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 AC114755.3-201ENST00000481111 251 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 RNU6-175P-201ENST00000516896 107 ntBASIC-0.66□□□□□ -2.52
SLC6A1P30531 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 RNU6-571P-201ENST00000384128 107 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 RNU6-472P-201ENST00000384299 107 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 MIR617-201ENST00000385030 97 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
SLC6A1P30531 SNORD77B-201ENST00000391112 67 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.67□□□□□ -2.52
SLC6A1P30531 MIR4308-201ENST00000580634 81 ntBASIC-0.67□□□□□ -2.52
SLC6A1P30531 SNORD114-29-201ENST00000364819 70 ntBASIC-0.68□□□□□ -2.52
SLC6A1P30531 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.68□□□□□ -2.52
SLC6A1P30531 RNY4P3-201ENST00000365254 95 ntBASIC-0.68□□□□□ -2.52
SLC6A1P30531 MIR539-201ENST00000365690 78 ntBASIC-0.68□□□□□ -2.52
SLC6A1P30531 RNU6-768P-201ENST00000384683 107 ntBASIC-0.68□□□□□ -2.52
SLC6A1P30531 MIR1302-6-201ENST00000408466 90 ntBASIC-0.68□□□□□ -2.52
SLC6A1P30531 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.68□□□□□ -2.52
SLC6A1P30531 MTND1P19-201ENST00000511780 315 ntBASIC-0.68□□□□□ -2.52
SLC6A1P30531 MIR8062-201ENST00000621515 85 ntBASIC-0.68□□□□□ -2.52
SLC6A1P30531 RNY4P28-201ENST00000365281 93 ntBASIC-0.69□□□□□ -2.52
SLC6A1P30531 SNORD115-44-201ENST00000365391 82 ntBASIC-0.69□□□□□ -2.52
SLC6A1P30531 RNU6-616P-201ENST00000384353 107 ntBASIC-0.69□□□□□ -2.52
SLC6A1P30531 SNORD75.1-201ENST00000408373 60 ntBASIC-0.69□□□□□ -2.52
SLC6A1P30531 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 SNORD115-35-201ENST00000365122 82 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 SNORA33.2-201ENST00000365413 134 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 RNU6-455P-201ENST00000384681 107 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 MIR2113-201ENST00000459007 91 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 RNU6-635P-201ENST00000516651 102 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 RNU6-850P-201ENST00000516934 103 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 MIR4460-201ENST00000577862 86 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 U6.106-201ENST00000636360 105 ntBASIC-0.7□□□□□ -2.52
SLC6A1P30531 RNU6-818P-201ENST00000364837 108 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 SNORA51.5-201ENST00000384126 131 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 RNU6-154P-201ENST00000384306 106 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 MIR516A2-201ENST00000384888 90 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 MIR516A1-201ENST00000385033 90 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 MTATP6P21-201ENST00000440681 189 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 RNA5SP66-201ENST00000517178 101 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 MIR3149-201ENST00000584629 83 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 AC096720.1-201ENST00000604441 183 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 AC087741.2-201ENST00000619415 172 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 AL391099.1-201ENST00000624635 187 ntBASIC-0.71□□□□□ -2.52
SLC6A1P30531 U6.104-201ENST00000637979 90 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms