Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RNU6-315P-201ENST00000362666 107 ntBASIC1.6□□□□□ -2.15
CTGFP29279 RNA5SP133-201ENST00000363368 119 ntBASIC1.6□□□□□ -2.15
CTGFP29279 RNU6-590P-201ENST00000365039 107 ntBASIC1.6□□□□□ -2.15
CTGFP29279 SNORA24-201ENST00000384096 131 ntBASIC1.6□□□□□ -2.15
CTGFP29279 MIR635-201ENST00000384830 98 ntBASIC1.6□□□□□ -2.15
CTGFP29279 RNU6-519P-201ENST00000410590 108 ntBASIC1.6□□□□□ -2.15
CTGFP29279 RPS29P1-201ENST00000465274 159 ntBASIC1.6□□□□□ -2.15
CTGFP29279 RNU7-79P-201ENST00000516082 62 ntBASIC1.6□□□□□ -2.15
CTGFP29279 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.6□□□□□ -2.15
CTGFP29279 MIR6078-201ENST00000611069 100 ntBASIC1.6□□□□□ -2.15
CTGFP29279 AC243994.1-201ENST00000618627 109 ntBASIC1.6□□□□□ -2.15
CTGFP29279 MIR8063-201ENST00000621930 81 ntBASIC1.6□□□□□ -2.15
CTGFP29279 MIR302D-201ENST00000362275 68 ntBASIC1.59□□□□□ -2.15
CTGFP29279 RNU6-624P-201ENST00000363411 107 ntBASIC1.59□□□□□ -2.15
CTGFP29279 RNU6-865P-201ENST00000364772 107 ntBASIC1.59□□□□□ -2.15
CTGFP29279 Y_RNA.537-201ENST00000384626 109 ntBASIC1.59□□□□□ -2.15
CTGFP29279 SNORD41-201ENST00000386967 70 ntBASIC1.59□□□□□ -2.15
CTGFP29279 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
CTGFP29279 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
CTGFP29279 RNU6-539P-201ENST00000516665 103 ntBASIC1.59□□□□□ -2.15
CTGFP29279 RNU6-922P-201ENST00000516753 99 ntBASIC1.59□□□□□ -2.15
CTGFP29279 MIR4764-201ENST00000580680 88 ntBASIC1.59□□□□□ -2.15
CTGFP29279 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CTGFP29279 SNORD115-37-201ENST00000363768 82 ntBASIC1.58□□□□□ -2.16
CTGFP29279 MIR520C-201ENST00000385005 87 ntBASIC1.58□□□□□ -2.16
CTGFP29279 HSPE1P24-201ENST00000450782 238 ntBASIC1.58□□□□□ -2.16
CTGFP29279 snoU13.11-201ENST00000459219 104 ntBASIC1.58□□□□□ -2.16
CTGFP29279 SNORD111.1-201ENST00000516421 86 ntBASIC1.58□□□□□ -2.16
CTGFP29279 RNU6-687P-201ENST00000516443 89 ntBASIC1.58□□□□□ -2.16
CTGFP29279 RNU7-53P-201ENST00000516705 60 ntBASIC1.58□□□□□ -2.16
CTGFP29279 MTND5P40-201ENST00000559945 246 ntBASIC1.58□□□□□ -2.16
CTGFP29279 AL357312.1-201ENST00000603879 298 ntBASIC1.58□□□□□ -2.16
CTGFP29279 AC012493.3-201ENST00000604494 112 ntBASIC1.58□□□□□ -2.16
CTGFP29279 MIR8055-201ENST00000610739 97 ntBASIC1.58□□□□□ -2.16
CTGFP29279 AC008133.2-201ENST00000624540 351 ntBASIC1.58□□□□□ -2.16
CTGFP29279 SNORA63.2-201ENST00000362603 126 ntBASIC1.57□□□□□ -2.16
CTGFP29279 SNORD33-201ENST00000362761 85 ntBASIC1.57□□□□□ -2.16
CTGFP29279 RNU6-330P-201ENST00000363015 107 ntBASIC1.57□□□□□ -2.16
CTGFP29279 RNY1P13-201ENST00000365030 105 ntBASIC1.57□□□□□ -2.16
CTGFP29279 RNU6-132P-201ENST00000383863 107 ntBASIC1.57□□□□□ -2.16
CTGFP29279 RNU6-540P-201ENST00000384622 101 ntBASIC1.57□□□□□ -2.16
CTGFP29279 MIR9-2-201ENST00000384838 87 ntBASIC1.57□□□□□ -2.16
CTGFP29279 RNU6-602P-201ENST00000411155 105 ntBASIC1.57□□□□□ -2.16
CTGFP29279 RNU7-48P-201ENST00000458875 63 ntBASIC1.57□□□□□ -2.16
CTGFP29279 MIR2113-201ENST00000459007 91 ntBASIC1.57□□□□□ -2.16
CTGFP29279 RNU6-448P-201ENST00000517052 107 ntBASIC1.57□□□□□ -2.16
CTGFP29279 MIR3152-201ENST00000579801 74 ntBASIC1.57□□□□□ -2.16
CTGFP29279 AC090897.1-201ENST00000580909 226 ntBASIC1.57□□□□□ -2.16
CTGFP29279 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
CTGFP29279 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CTGFP29279 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.57□□□□□ -2.16
CTGFP29279 RNU6-1094P-201ENST00000362416 104 ntBASIC1.56□□□□□ -2.16
CTGFP29279 SNORD115-31-201ENST00000365318 82 ntBASIC1.56□□□□□ -2.16
CTGFP29279 RNU7-73P-201ENST00000458743 63 ntBASIC1.56□□□□□ -2.16
CTGFP29279 GHRLOS.1-201ENST00000610995 70 ntBASIC1.56□□□□□ -2.16
CTGFP29279 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.56□□□□□ -2.16
CTGFP29279 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CTGFP29279 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CTGFP29279 Y_RNA.168-201ENST00000363740 102 ntBASIC1.55□□□□□ -2.16
CTGFP29279 SNORD1A-201ENST00000364968 72 ntBASIC1.55□□□□□ -2.16
CTGFP29279 MIR1236-201ENST00000408340 102 ntBASIC1.55□□□□□ -2.16
CTGFP29279 BX276092.1-201ENST00000427368 251 ntBASIC1.55□□□□□ -2.16
CTGFP29279 AC125388.1-201ENST00000459631 156 ntBASIC1.55□□□□□ -2.16
CTGFP29279 AC079140.2-201ENST00000506193 142 ntBASIC1.55□□□□□ -2.16
CTGFP29279 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
CTGFP29279 RNU6-70P-201ENST00000516438 60 ntBASIC1.55□□□□□ -2.16
CTGFP29279 MIR548AO-201ENST00000579992 96 ntBASIC1.55□□□□□ -2.16
CTGFP29279 MIR4796-201ENST00000580742 81 ntBASIC1.55□□□□□ -2.16
CTGFP29279 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
CTGFP29279 RNU6-411P-201ENST00000384451 107 ntBASIC1.54□□□□□ -2.16
CTGFP29279 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
CTGFP29279 snoU13.16-201ENST00000459350 104 ntBASIC1.54□□□□□ -2.16
CTGFP29279 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
CTGFP29279 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.54□□□□□ -2.16
CTGFP29279 RNA5SP48-201ENST00000363969 126 ntBASIC1.53□□□□□ -2.16
CTGFP29279 Y_RNA.205-201ENST00000364128 113 ntBASIC1.53□□□□□ -2.16
CTGFP29279 RNU6-686P-201ENST00000364839 107 ntBASIC1.53□□□□□ -2.16
CTGFP29279 MIR520H-201ENST00000385126 88 ntBASIC1.53□□□□□ -2.16
CTGFP29279 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
CTGFP29279 snoU13.17-201ENST00000458802 104 ntBASIC1.53□□□□□ -2.16
CTGFP29279 RNU7-41P-201ENST00000515917 61 ntBASIC1.53□□□□□ -2.16
CTGFP29279 RNU6-75P-201ENST00000515944 104 ntBASIC1.53□□□□□ -2.16
CTGFP29279 RNA5SP436-201ENST00000516020 115 ntBASIC1.53□□□□□ -2.16
CTGFP29279 SNORA18.5-201ENST00000516616 101 ntBASIC1.53□□□□□ -2.16
CTGFP29279 AC019176.1-201ENST00000518519 225 ntBASIC1.53□□□□□ -2.16
CTGFP29279 uc_338.6-201ENST00000613544 171 ntBASIC1.53□□□□□ -2.16
CTGFP29279 MIRLET7F1-201ENST00000362202 87 ntBASIC1.52□□□□□ -2.17
CTGFP29279 RNA5SP261-201ENST00000410536 106 ntBASIC1.52□□□□□ -2.17
CTGFP29279 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
CTGFP29279 MIR3937-201ENST00000580135 106 ntBASIC1.52□□□□□ -2.17
CTGFP29279 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.52□□□□□ -2.17
CTGFP29279 MIR4251-201ENST00000635819 61 ntBASIC1.52□□□□□ -2.17
CTGFP29279 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CTGFP29279 SNORD114-10-201ENST00000363409 72 ntBASIC1.51□□□□□ -2.17
CTGFP29279 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
CTGFP29279 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.51□□□□□ -2.17
CTGFP29279 MIR548J-201ENST00000408833 112 ntBASIC1.51□□□□□ -2.17
CTGFP29279 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.51□□□□□ -2.17
CTGFP29279 RNU6-634P-201ENST00000459134 106 ntBASIC1.51□□□□□ -2.17
CTGFP29279 RPL30P7-201ENST00000479312 323 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms