Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 RNU6-616P-201ENST00000384353 107 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 SNORD63B-201ENST00000411005 70 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 RNU7-2P-201ENST00000516096 62 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 RNU4-71P-201ENST00000516258 113 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 AL670379.3-201ENST00000605040 251 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 AP001362.1-201ENST00000625165 124 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 MIR6844-201ENST00000637122 62 ntBASIC-0.3□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 RNU6-309P-201ENST00000364573 106 ntBASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 AC104692.1-201ENST00000472406 90 ntBASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 AC022559.1-201ENST00000520905 205 ntBASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 MIR376B-201ENST00000614515 100 ntBASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 MIR3658-201ENST00000636291 56 ntBASIC-0.31□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 SNORD77B-201ENST00000391112 67 ntBASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 SNORA75.1-201ENST00000391130 148 ntBASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 MIR548I2-201ENST00000408348 149 ntBASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 AC108081.1-201ENST00000604358 221 ntBASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 MIR1295B-201ENST00000636144 60 ntBASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.32□□□□□ -2.46
HLA-DPB1P04440 RNU6-509P-201ENST00000363519 107 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 RNU6-312P-201ENST00000364629 107 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 RNU6-524P-201ENST00000384270 107 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 MIR519A1-201ENST00000385257 85 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 MIR876-201ENST00000401147 81 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 RNU7-106P-201ENST00000459514 67 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 RNY4P20-201ENST00000516678 93 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 AC062037.2-201ENST00000610137 73 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 AC084368.1-201ENST00000620935 65 ntBASIC-0.33□□□□□ -2.46
HLA-DPB1P04440 RNU6-170P-201ENST00000362832 104 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 SNORD114-12-201ENST00000365400 75 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 SNORD4A-201ENST00000459174 72 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 SNORA25.13-201ENST00000516395 103 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 RNU7-13P-201ENST00000516413 62 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.34□□□□□ -2.46
HLA-DPB1P04440 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 SNORD115-35-201ENST00000365122 82 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 MIR34C-201ENST00000384831 77 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 MIR516B1-201ENST00000385211 90 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 CR383656.4-201ENST00000546909 122 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 MTND5P40-201ENST00000559945 246 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 MIR3646-201ENST00000578301 84 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 MIR548AG2-201ENST00000581228 64 ntBASIC-0.35□□□□□ -2.47
HLA-DPB1P04440 RNA5SP257-201ENST00000363023 116 ntBASIC-0.36□□□□□ -2.47
HLA-DPB1P04440 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
HLA-DPB1P04440 SNORA20.1-201ENST00000364790 130 ntBASIC-0.36□□□□□ -2.47
HLA-DPB1P04440 MIR214-201ENST00000385214 110 ntBASIC-0.36□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.36□□□□□ -2.47
HLA-DPB1P04440 AL137067.1-201ENST00000615933 120 ntBASIC-0.36□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 RNU1-141P-201ENST00000364623 158 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 SNORD18B-201ENST00000365659 72 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 RNU6-46P-201ENST00000383860 107 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 RNU6-239P-201ENST00000390990 99 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 AL603914.1-201ENST00000401964 204 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 MIR1302-3-201ENST00000408128 138 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 AL118496.2-201ENST00000448300 230 ntBASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.37□□□□□ -2.47
HLA-DPB1P04440 MIR148A-201ENST00000362215 68 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 RNU4-84P-201ENST00000364200 139 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 RNU6-571P-201ENST00000384128 107 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 MT-TI-201ENST00000387365 69 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 SNORD37.2-201ENST00000391075 66 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 RNU7-121P-201ENST00000516604 62 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 RNU6-850P-201ENST00000516934 103 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 MIR4473-201ENST00000583731 91 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 RN7SL660P-201ENST00000614852 299 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 AC087741.2-201ENST00000619415 172 ntBASIC-0.38□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.39□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.39□□□□□ -2.47
HLA-DPB1P04440 MIR519E-201ENST00000385075 84 ntBASIC-0.39□□□□□ -2.47
HLA-DPB1P04440 RNU6-327P-201ENST00000516270 127 ntBASIC-0.39□□□□□ -2.47
HLA-DPB1P04440 AC130289.1-201ENST00000577321 73 ntBASIC-0.39□□□□□ -2.47
HLA-DPB1P04440 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.39□□□□□ -2.47
HLA-DPB1P04440 AC141273.2-201ENST00000618989 130 ntBASIC-0.39□□□□□ -2.47
HLA-DPB1P04440 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.39□□□□□ -2.47
HLA-DPB1P04440 SNORD49B-201ENST00000365172 72 ntBASIC-0.4□□□□□ -2.47
HLA-DPB1P04440 MIR516A2-201ENST00000384888 90 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms