Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RNU7-121P-201ENST00000516604 62 ntBASIC-0.3□□□□□ -2.46
HLA-DQB1P01920 MIR6514-201ENST00000622549 70 ntBASIC-0.3□□□□□ -2.46
HLA-DQB1P01920 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.31□□□□□ -2.46
HLA-DQB1P01920 SNORA63-201ENST00000363450 132 ntBASIC-0.31□□□□□ -2.46
HLA-DQB1P01920 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.31□□□□□ -2.46
HLA-DQB1P01920 SNORD115-35-201ENST00000365122 82 ntBASIC-0.31□□□□□ -2.46
HLA-DQB1P01920 AC109327.2-201ENST00000448339 378 ntBASIC-0.31□□□□□ -2.46
HLA-DQB1P01920 SNORA25.13-201ENST00000516395 103 ntBASIC-0.31□□□□□ -2.46
HLA-DQB1P01920 AC062037.2-201ENST00000610137 73 ntBASIC-0.31□□□□□ -2.46
HLA-DQB1P01920 RNU6-170P-201ENST00000362832 104 ntBASIC-0.32□□□□□ -2.46
HLA-DQB1P01920 RNU6-616P-201ENST00000384353 107 ntBASIC-0.32□□□□□ -2.46
HLA-DQB1P01920 SNORD77B-201ENST00000391112 67 ntBASIC-0.32□□□□□ -2.46
HLA-DQB1P01920 RNU7-106P-201ENST00000459514 67 ntBASIC-0.32□□□□□ -2.46
HLA-DQB1P01920 RNY4P20-201ENST00000516678 93 ntBASIC-0.32□□□□□ -2.46
HLA-DQB1P01920 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
HLA-DQB1P01920 MTND5P40-201ENST00000559945 246 ntBASIC-0.32□□□□□ -2.46
HLA-DQB1P01920 AC108081.1-201ENST00000604358 221 ntBASIC-0.32□□□□□ -2.46
HLA-DQB1P01920 MIR148A-201ENST00000362215 68 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 RNU4-84P-201ENST00000364200 139 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 RNU1-141P-201ENST00000364623 158 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 RNU6-571P-201ENST00000384128 107 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 RNY1P4-201ENST00000384595 115 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 RNU6-239P-201ENST00000390990 99 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 AL603914.1-201ENST00000401964 204 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 AC022559.1-201ENST00000520905 205 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 MIR548AG2-201ENST00000581228 64 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 AL670379.3-201ENST00000605040 251 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 AC084368.1-201ENST00000620935 65 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 MIR3658-201ENST00000636291 56 ntBASIC-0.33□□□□□ -2.46
HLA-DQB1P01920 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 SNORD114-12-201ENST00000365400 75 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 RNU6-524P-201ENST00000384270 107 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 AC093423.1-201ENST00000440817 142 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 RNU7-13P-201ENST00000516413 62 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 AL137067.1-201ENST00000615933 120 ntBASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.34□□□□□ -2.46
HLA-DQB1P01920 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 SNORA20.1-201ENST00000364790 130 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 MIR34C-201ENST00000384831 77 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 MIR516B1-201ENST00000385211 90 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 MIR1302-3-201ENST00000408128 138 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 RNU7-74P-201ENST00000459104 62 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 RN7SL660P-201ENST00000614852 299 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 AC087741.2-201ENST00000619415 172 ntBASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.35□□□□□ -2.47
HLA-DQB1P01920 MIR655-201ENST00000362159 97 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 SNORD18B-201ENST00000365659 72 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 MIR106A-201ENST00000384870 81 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 MIR519E-201ENST00000385075 84 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 MIR214-201ENST00000385214 110 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 MT-TI-201ENST00000387365 69 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 RNU6-850P-201ENST00000516934 103 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 MIR1273G-201ENST00000577677 100 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 MIR8087-201ENST00000612745 78 ntBASIC-0.36□□□□□ -2.47
HLA-DQB1P01920 SNORD115-19-201ENST00000363098 82 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 SNORD115-18-201ENST00000363293 82 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 SNORD115-17-201ENST00000364612 82 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 IGKV1-22-201ENST00000524313 326 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 AC130289.1-201ENST00000577321 73 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
HLA-DQB1P01920 MIR516A2-201ENST00000384888 90 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 MIR617-201ENST00000385030 97 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 MIR516A1-201ENST00000385033 90 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 RNA5SP300-201ENST00000391197 107 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 RNU6-327P-201ENST00000516270 127 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 MIR6507-201ENST00000613630 70 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 AC141273.2-201ENST00000618989 130 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 U4.1-201ENST00000620349 87 ntBASIC-0.38□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.39□□□□□ -2.47
HLA-DQB1P01920 SNORD49B-201ENST00000365172 72 ntBASIC-0.39□□□□□ -2.47
HLA-DQB1P01920 MIR1197-201ENST00000408818 88 ntBASIC-0.39□□□□□ -2.47
HLA-DQB1P01920 AC244250.2-201ENST00000418731 148 ntBASIC-0.39□□□□□ -2.47
HLA-DQB1P01920 AC069503.3-201ENST00000618674 145 ntBASIC-0.39□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.4□□□□□ -2.47
HLA-DQB1P01920 RNU6-811P-201ENST00000384069 107 ntBASIC-0.4□□□□□ -2.47
HLA-DQB1P01920 RNU7-197P-201ENST00000458836 62 ntBASIC-0.4□□□□□ -2.47
HLA-DQB1P01920 MIR3121-201ENST00000579680 77 ntBASIC-0.4□□□□□ -2.47
HLA-DQB1P01920 MIR4503-201ENST00000582187 83 ntBASIC-0.4□□□□□ -2.47
HLA-DQB1P01920 AC072026.1-201ENST00000605023 201 ntBASIC-0.4□□□□□ -2.47
HLA-DQB1P01920 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.41□□□□□ -2.48
HLA-DQB1P01920 SNORD115-44-201ENST00000365391 82 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 380.4 ms