Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
CNOT4O95628 MIR8066-201ENST00000617280 78 ntBASIC1.57□□□□□ -2.16
CNOT4O95628 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CNOT4O95628 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CNOT4O95628 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
CNOT4O95628 Y_RNA.57-201ENST00000362806 113 ntBASIC1.56□□□□□ -2.16
CNOT4O95628 Y_RNA.437-201ENST00000384113 113 ntBASIC1.56□□□□□ -2.16
CNOT4O95628 RNA5SP95-201ENST00000410319 137 ntBASIC1.56□□□□□ -2.16
CNOT4O95628 RNA5SP395-201ENST00000516567 118 ntBASIC1.56□□□□□ -2.16
CNOT4O95628 RNU6-850P-201ENST00000516934 103 ntBASIC1.56□□□□□ -2.16
CNOT4O95628 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.56□□□□□ -2.16
CNOT4O95628 AL359821.1-201ENST00000605519 182 ntBASIC1.56□□□□□ -2.16
CNOT4O95628 AC008163.1-202ENST00000636004 2889 ntBASIC1.56□□□□□ -2.16
CNOT4O95628 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CNOT4O95628 MIR26B-201ENST00000362251 77 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 RNU6-580P-201ENST00000365159 107 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 MIR499A-201ENST00000384903 122 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 RNU4-62P-201ENST00000410125 130 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 RNU6-519P-201ENST00000410590 108 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 RNU4-83P-201ENST00000410863 133 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 BX276092.1-201ENST00000427368 251 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 MIR8070-201ENST00000616510 88 ntBASIC1.55□□□□□ -2.16
CNOT4O95628 SNORD115-27-201ENST00000364430 82 ntBASIC1.54□□□□□ -2.16
CNOT4O95628 SNORA25.8-201ENST00000364831 128 ntBASIC1.54□□□□□ -2.16
CNOT4O95628 SNORA25.9-201ENST00000365087 128 ntBASIC1.54□□□□□ -2.16
CNOT4O95628 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
CNOT4O95628 MIR18B-201ENST00000454574 71 ntBASIC1.54□□□□□ -2.16
CNOT4O95628 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
CNOT4O95628 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
CNOT4O95628 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.54□□□□□ -2.16
CNOT4O95628 Y_RNA.355-201ENST00000365462 98 ntBASIC1.53□□□□□ -2.16
CNOT4O95628 SNORD26-201ENST00000384147 75 ntBASIC1.53□□□□□ -2.16
CNOT4O95628 MIR519C-201ENST00000385053 87 ntBASIC1.53□□□□□ -2.16
CNOT4O95628 Y_RNA.607-201ENST00000410597 98 ntBASIC1.53□□□□□ -2.16
CNOT4O95628 RNU6-165P-201ENST00000517170 99 ntBASIC1.53□□□□□ -2.16
CNOT4O95628 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.53□□□□□ -2.16
CNOT4O95628 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.52□□□□□ -2.17
CNOT4O95628 Y_RNA.313-201ENST00000365095 103 ntBASIC1.52□□□□□ -2.17
CNOT4O95628 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
CNOT4O95628 RNU6-279P-201ENST00000391297 101 ntBASIC1.52□□□□□ -2.17
CNOT4O95628 SNORD93-201ENST00000408813 74 ntBASIC1.52□□□□□ -2.17
CNOT4O95628 AC087499.7-201ENST00000441958 109 ntBASIC1.52□□□□□ -2.17
CNOT4O95628 MIR4491-201ENST00000581087 68 ntBASIC1.52□□□□□ -2.17
CNOT4O95628 AL512598.1-201ENST00000610158 273 ntBASIC1.52□□□□□ -2.17
CNOT4O95628 RNU4-58P-201ENST00000363192 141 ntBASIC1.51□□□□□ -2.17
CNOT4O95628 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
CNOT4O95628 Y_RNA.588-201ENST00000391254 102 ntBASIC1.51□□□□□ -2.17
CNOT4O95628 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.51□□□□□ -2.17
CNOT4O95628 AC019288.1-201ENST00000557918 224 ntBASIC1.51□□□□□ -2.17
CNOT4O95628 RNU1-36P-201ENST00000365130 165 ntBASIC1.5□□□□□ -2.17
CNOT4O95628 RNU6-524P-201ENST00000384270 107 ntBASIC1.5□□□□□ -2.17
CNOT4O95628 MIR518E-201ENST00000385252 88 ntBASIC1.5□□□□□ -2.17
CNOT4O95628 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
CNOT4O95628 Y_RNA.648-201ENST00000459455 110 ntBASIC1.5□□□□□ -2.17
CNOT4O95628 RNU6-531P-201ENST00000516694 104 ntBASIC1.5□□□□□ -2.17
CNOT4O95628 SNORA25.16-201ENST00000516741 121 ntBASIC1.5□□□□□ -2.17
CNOT4O95628 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
CNOT4O95628 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CNOT4O95628 SNORD115-37-201ENST00000363768 82 ntBASIC1.49□□□□□ -2.17
CNOT4O95628 RNU6-652P-201ENST00000365488 107 ntBASIC1.49□□□□□ -2.17
CNOT4O95628 SNORA72.6-201ENST00000384520 129 ntBASIC1.49□□□□□ -2.17
CNOT4O95628 RNU6-1054P-201ENST00000411293 104 ntBASIC1.49□□□□□ -2.17
CNOT4O95628 SNORD4B-201ENST00000459083 72 ntBASIC1.49□□□□□ -2.17
CNOT4O95628 AC093729.1-201ENST00000513074 128 ntBASIC1.49□□□□□ -2.17
CNOT4O95628 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CNOT4O95628 AC023934.1-201ENST00000574529 2389 ntBASIC1.48□□□□□ -2.17
CNOT4O95628 RNU6-403P-201ENST00000363163 104 ntBASIC1.48□□□□□ -2.17
CNOT4O95628 RNU6-857P-201ENST00000515893 110 ntBASIC1.48□□□□□ -2.17
CNOT4O95628 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.48□□□□□ -2.17
CNOT4O95628 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
CNOT4O95628 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.48□□□□□ -2.17
CNOT4O95628 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
CNOT4O95628 Y_RNA.244-201ENST00000364484 109 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 Y_RNA.316-201ENST00000365118 111 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 Y_RNA.330-201ENST00000365230 109 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 MIR516A2-201ENST00000384888 90 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 MIR516A1-201ENST00000385033 90 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CNOT4O95628 MIR1236-201ENST00000408340 102 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 MIR1257-201ENST00000408490 117 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 RNU7-85P-201ENST00000458851 63 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 RNU7-185P-201ENST00000459215 60 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 snoU13.21-201ENST00000459368 105 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 AC048334.1-201ENST00000477975 159 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.47□□□□□ -2.17
CNOT4O95628 RNU4-32P-201ENST00000363404 141 ntBASIC1.46□□□□□ -2.18
CNOT4O95628 SNORD113.3-201ENST00000364630 78 ntBASIC1.46□□□□□ -2.18
CNOT4O95628 MIR222-201ENST00000384992 110 ntBASIC1.46□□□□□ -2.18
CNOT4O95628 RNU6-243P-201ENST00000391140 107 ntBASIC1.46□□□□□ -2.18
CNOT4O95628 RNU6-1254P-201ENST00000391266 104 ntBASIC1.46□□□□□ -2.18
CNOT4O95628 RNU7-95P-201ENST00000459222 64 ntBASIC1.46□□□□□ -2.18
CNOT4O95628 RNU6-1194P-201ENST00000516208 104 ntBASIC1.46□□□□□ -2.18
CNOT4O95628 RNU7-40P-201ENST00000516397 64 ntBASIC1.46□□□□□ -2.18
CNOT4O95628 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
CNOT4O95628 SNORD36A-201ENST00000362874 73 ntBASIC1.45□□□□□ -2.18
CNOT4O95628 SNORD48-201ENST00000364953 64 ntBASIC1.45□□□□□ -2.18
CNOT4O95628 RNU6-24P-201ENST00000384440 107 ntBASIC1.45□□□□□ -2.18
CNOT4O95628 SNORA75.2-201ENST00000391138 150 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms