Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC096949.1-201ENST00000412047 152 ntBASIC1.3□□□□□ -2.2
RAPGEF3O95398 SNORD124-201ENST00000459577 104 ntBASIC1.3□□□□□ -2.2
RAPGEF3O95398 HAR1A.1-201ENST00000459583 118 ntBASIC1.3□□□□□ -2.2
RAPGEF3O95398 RNU6-589P-201ENST00000516485 107 ntBASIC1.3□□□□□ -2.2
RAPGEF3O95398 AC068339.1-201ENST00000526965 141 ntBASIC1.3□□□□□ -2.2
RAPGEF3O95398 AC020891.4-201ENST00000605745 93 ntBASIC1.3□□□□□ -2.2
RAPGEF3O95398 MIR330-201ENST00000362196 94 ntBASIC1.29□□□□□ -2.2
RAPGEF3O95398 RNU6-1325P-201ENST00000364905 105 ntBASIC1.29□□□□□ -2.2
RAPGEF3O95398 Y_RNA.448-201ENST00000384185 108 ntBASIC1.29□□□□□ -2.2
RAPGEF3O95398 RNU6-1321P-201ENST00000390905 107 ntBASIC1.29□□□□□ -2.2
RAPGEF3O95398 RNU7-48P-201ENST00000458875 63 ntBASIC1.29□□□□□ -2.2
RAPGEF3O95398 RNU6-977P-201ENST00000516411 103 ntBASIC1.29□□□□□ -2.2
RAPGEF3O95398 RNU6-1018P-201ENST00000516577 106 ntBASIC1.29□□□□□ -2.2
RAPGEF3O95398 AC105081.1-201ENST00000617727 106 ntBASIC1.29□□□□□ -2.2
RAPGEF3O95398 Y_RNA.155-201ENST00000363632 101 ntBASIC1.28□□□□□ -2.2
RAPGEF3O95398 RNU6-865P-201ENST00000364772 107 ntBASIC1.28□□□□□ -2.2
RAPGEF3O95398 Y_RNA.323-201ENST00000365157 109 ntBASIC1.28□□□□□ -2.2
RAPGEF3O95398 Y_RNA.328-201ENST00000365208 113 ntBASIC1.28□□□□□ -2.2
RAPGEF3O95398 RNU4-83P-201ENST00000410863 133 ntBASIC1.28□□□□□ -2.2
RAPGEF3O95398 Y_RNA.709-201ENST00000516952 92 ntBASIC1.28□□□□□ -2.2
RAPGEF3O95398 MIR4491-201ENST00000581087 68 ntBASIC1.28□□□□□ -2.2
RAPGEF3O95398 MIR4804-201ENST00000581683 73 ntBASIC1.28□□□□□ -2.2
RAPGEF3O95398 RNA5SP62-201ENST00000363457 110 ntBASIC1.27□□□□□ -2.21
RAPGEF3O95398 Y_RNA.588-201ENST00000391254 102 ntBASIC1.27□□□□□ -2.21
RAPGEF3O95398 RNU6-733P-201ENST00000410759 104 ntBASIC1.27□□□□□ -2.21
RAPGEF3O95398 AC138907.6-201ENST00000568401 126 ntBASIC1.27□□□□□ -2.21
RAPGEF3O95398 MIR5009-201ENST00000578736 100 ntBASIC1.27□□□□□ -2.21
RAPGEF3O95398 AC025627.3-201ENST00000582078 182 ntBASIC1.27□□□□□ -2.21
RAPGEF3O95398 MIR4661-201ENST00000582720 75 ntBASIC1.27□□□□□ -2.21
RAPGEF3O95398 SNORD92-201ENST00000585078 85 ntBASIC1.27□□□□□ -2.21
RAPGEF3O95398 RNU6-1107P-201ENST00000364817 104 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 RNU6-215P-201ENST00000365169 102 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 RNU6-364P-201ENST00000384387 107 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
RAPGEF3O95398 SNORA7.5-201ENST00000410672 110 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 RNU6-1194P-201ENST00000516208 104 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 RNU6-765P-201ENST00000516916 99 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 RNU7-156P-201ENST00000517214 74 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 AC138749.4-201ENST00000563970 127 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 MIR4711-201ENST00000578274 70 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 AP001362.1-201ENST00000625165 124 ntBASIC1.26□□□□□ -2.21
RAPGEF3O95398 RNU6-1313P-201ENST00000362622 102 ntBASIC1.25□□□□□ -2.21
RAPGEF3O95398 U8.6-201ENST00000364939 135 ntBASIC1.25□□□□□ -2.21
RAPGEF3O95398 SNORD89-201ENST00000390981 114 ntBASIC1.25□□□□□ -2.21
RAPGEF3O95398 AC015818.7-201ENST00000428754 109 ntBASIC1.25□□□□□ -2.21
RAPGEF3O95398 AC087499.7-201ENST00000441958 109 ntBASIC1.25□□□□□ -2.21
RAPGEF3O95398 UBL5P1-201ENST00000507979 193 ntBASIC1.25□□□□□ -2.21
RAPGEF3O95398 RNU6-403P-201ENST00000363163 104 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 RNU4-58P-201ENST00000363192 141 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 RNA5SP133-201ENST00000363368 119 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 RNU6-1307P-201ENST00000391012 103 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 RNU7-56P-201ENST00000458744 62 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 RNA5SP255-201ENST00000516370 107 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 RNU6-919P-201ENST00000516731 104 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 MIR6082-201ENST00000613604 109 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 U6.109-201ENST00000636749 87 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 AL512310.12-203ENST00000640543 90 ntBASIC1.24□□□□□ -2.21
RAPGEF3O95398 RNU6-716P-201ENST00000365621 103 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 RNU6-1014P-201ENST00000383940 103 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 SNORD38.2-201ENST00000384470 69 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 SNORD20-201ENST00000384550 80 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 MIR520F-201ENST00000384824 87 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 RNU6-679P-201ENST00000391003 106 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 RNU1-119P-201ENST00000391122 165 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 MIR376B-201ENST00000614515 100 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 MIR8066-201ENST00000617280 78 ntBASIC1.23□□□□□ -2.21
RAPGEF3O95398 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RAPGEF3O95398 Y_RNA.42-201ENST00000362660 108 ntBASIC1.22□□□□□ -2.21
RAPGEF3O95398 Y_RNA.119-201ENST00000363301 96 ntBASIC1.22□□□□□ -2.21
RAPGEF3O95398 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RAPGEF3O95398 MIR508-201ENST00000384857 115 ntBASIC1.22□□□□□ -2.21
RAPGEF3O95398 PDCD5P2-201ENST00000507570 312 ntBASIC1.22□□□□□ -2.21
RAPGEF3O95398 DEFB131E-201ENST00000532329 154 ntBASIC1.22□□□□□ -2.21
RAPGEF3O95398 MIR4694-201ENST00000578534 80 ntBASIC1.22□□□□□ -2.21
RAPGEF3O95398 Y_RNA.360-201ENST00000365512 102 ntBASIC1.21□□□□□ -2.22
RAPGEF3O95398 Y_RNA.377-201ENST00000365644 108 ntBASIC1.21□□□□□ -2.22
RAPGEF3O95398 SNORA72.6-201ENST00000384520 129 ntBASIC1.21□□□□□ -2.22
RAPGEF3O95398 SNORD105-201ENST00000386910 85 ntBASIC1.21□□□□□ -2.22
RAPGEF3O95398 MIR1197-201ENST00000408818 88 ntBASIC1.21□□□□□ -2.22
RAPGEF3O95398 RNU7-102P-201ENST00000458948 62 ntBASIC1.21□□□□□ -2.22
RAPGEF3O95398 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
RAPGEF3O95398 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RAPGEF3O95398 Y_RNA.13-201ENST00000362403 112 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 MIR34C-201ENST00000384831 77 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 MIR605-201ENST00000385078 83 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 RNY4P18-201ENST00000391107 89 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 AL353813.1-201ENST00000440700 253 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 SNORA25.16-201ENST00000516741 121 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 AP003327.1-201ENST00000529684 127 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 MIR2909-201ENST00000617113 69 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 MIR6835-201ENST00000621552 64 ntBASIC1.2□□□□□ -2.22
RAPGEF3O95398 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RAPGEF3O95398 MIR1302-5-201ENST00000408164 150 ntBASIC1.19□□□□□ -2.22
RAPGEF3O95398 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
RAPGEF3O95398 RNY3P2-201ENST00000362918 102 ntBASIC1.18□□□□□ -2.22
RAPGEF3O95398 SNORD38.1-201ENST00000363863 68 ntBASIC1.18□□□□□ -2.22
RAPGEF3O95398 RNU6-1201P-201ENST00000384227 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 862.3 ms