Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
SPDEFO95238 SNORA67.5-201ENST00000391036 107 ntBASIC1.23□□□□□ -2.21
SPDEFO95238 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SPDEFO95238 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SPDEFO95238 Y_RNA.42-201ENST00000362660 108 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 RNY1P1-201ENST00000364372 112 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 SNORA67.6-201ENST00000391093 99 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 MIR1289-2-201ENST00000408360 111 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 MIR1261-201ENST00000408659 82 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 Y_RNA.609-201ENST00000410669 89 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 Y_RNA.620-201ENST00000411009 88 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 RNU6-765P-201ENST00000516916 99 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 RNU6-548P-201ENST00000517083 115 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 SNORA31.24-201ENST00000517232 57 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 MIR4676-201ENST00000583078 72 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 AC013244.2-201ENST00000603396 103 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
SPDEFO95238 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
SPDEFO95238 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 RNU6-1152P-201ENST00000384576 107 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 RNY1P4-201ENST00000384595 115 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 RNU6-267P-201ENST00000516714 103 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 IGLL4P-201ENST00000614590 133 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 MIR101-2-201ENST00000362195 79 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 SNORD100-201ENST00000408573 76 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 AL161932.1-201ENST00000437408 146 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 RNU7-156P-201ENST00000517214 74 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 SNORD92-201ENST00000585078 85 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 RNA5SP173-201ENST00000364857 136 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPDEFO95238 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 MIR516A2-201ENST00000384888 90 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 MIR516A1-201ENST00000385033 90 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 MIR4781-201ENST00000585250 76 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 SNORD36A-201ENST00000362874 73 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 Y_RNA.73-201ENST00000362910 113 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 RNU6-497P-201ENST00000365316 104 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 MIR938-201ENST00000401216 83 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 SNORD63B-201ENST00000411005 70 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 RNU6-592P-201ENST00000411333 103 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 SNORD13-201ENST00000459299 104 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 Y_RNA.648-201ENST00000459455 110 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 AC022137.1-201ENST00000483735 151 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 MIR548H5-201ENST00000580314 60 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 AL645939.4-201ENST00000604495 135 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SPDEFO95238 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SPDEFO95238 RNU6-633P-201ENST00000362612 103 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 Y_RNA.56-201ENST00000362798 112 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 RNU6-364P-201ENST00000384387 107 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 Y_RNA.536-201ENST00000384621 113 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 MIR635-201ENST00000384830 98 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SPDEFO95238 RNU6-1254P-201ENST00000391266 104 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
SPDEFO95238 MIR1323-201ENST00000408090 73 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 RNU6-519P-201ENST00000410590 108 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 RNU7-106P-201ENST00000459514 67 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 MIR4804-201ENST00000581683 73 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 RNU7-10P-201ENST00000607194 63 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.17□□□□□ -2.22
SPDEFO95238 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SPDEFO95238 MIR519A1-201ENST00000385257 85 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 MIR100-201ENST00000385259 80 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 MIR1827-201ENST00000408549 66 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 AL354695.1-201ENST00000427935 228 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 RNU7-102P-201ENST00000458948 62 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 TRAJ51-201ENST00000504127 63 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 RNU6-977P-201ENST00000516411 103 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 Y_RNA.697-201ENST00000516776 113 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 MIR5588-201ENST00000581890 63 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SPDEFO95238 MIR1-1-201ENST00000362147 71 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 RNU6-509P-201ENST00000363519 107 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 RNU6-573P-201ENST00000383938 106 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 RNU6-243P-201ENST00000391140 107 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 AC092628.1-201ENST00000436250 252 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 AC067940.1-201ENST00000458411 300 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 RNU7-85P-201ENST00000458851 63 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 AP003327.1-201ENST00000529684 127 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 MIR7843-201ENST00000622274 79 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SPDEFO95238 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 RNU6-979P-201ENST00000383896 107 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 RNU7-56P-201ENST00000458744 62 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 SNORD4B-201ENST00000459083 72 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 snoU13.11-201ENST00000459219 104 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 RNU6-448P-201ENST00000517052 107 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 Y_RNA.4-201ENST00000362333 112 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 SNORD115-27-201ENST00000364430 82 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms