Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MIR1265-201ENST00000408444 86 ntBASIC0.24□□□□□ -2.37
RTN3O95197 RNY4P20-201ENST00000516678 93 ntBASIC0.24□□□□□ -2.37
RTN3O95197 MIR548H5-201ENST00000580314 60 ntBASIC0.24□□□□□ -2.37
RTN3O95197 MIR206-201ENST00000384872 86 ntBASIC0.23□□□□□ -2.37
RTN3O95197 RNU6-1321P-201ENST00000390905 107 ntBASIC0.23□□□□□ -2.37
RTN3O95197 Y_RNA.580-201ENST00000391004 95 ntBASIC0.23□□□□□ -2.37
RTN3O95197 RNA5SP299-201ENST00000391203 116 ntBASIC0.23□□□□□ -2.37
RTN3O95197 AC074198.2-201ENST00000508153 258 ntBASIC0.23□□□□□ -2.37
RTN3O95197 RNU6-182P-201ENST00000516970 105 ntBASIC0.23□□□□□ -2.37
RTN3O95197 RNU7-10P-201ENST00000607194 63 ntBASIC0.23□□□□□ -2.37
RTN3O95197 TUG1_4.1-201ENST00000619464 181 ntBASIC0.23□□□□□ -2.37
RTN3O95197 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.22□□□□□ -2.37
RTN3O95197 MIR1912-201ENST00000410389 80 ntBASIC0.22□□□□□ -2.37
RTN3O95197 AC069271.1-201ENST00000445577 156 ntBASIC0.22□□□□□ -2.37
RTN3O95197 RNU7-197P-201ENST00000458836 62 ntBASIC0.22□□□□□ -2.37
RTN3O95197 AC138869.1-201ENST00000568623 124 ntBASIC0.22□□□□□ -2.37
RTN3O95197 MIR5190-201ENST00000581537 80 ntBASIC0.22□□□□□ -2.37
RTN3O95197 AC108081.1-201ENST00000604358 221 ntBASIC0.22□□□□□ -2.37
RTN3O95197 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
RTN3O95197 RNU6-1126P-201ENST00000384002 107 ntBASIC0.21□□□□□ -2.38
RTN3O95197 Y_RNA.448-201ENST00000384185 108 ntBASIC0.21□□□□□ -2.38
RTN3O95197 MIR513C-201ENST00000401352 84 ntBASIC0.21□□□□□ -2.38
RTN3O95197 AC244505.6-201ENST00000452829 130 ntBASIC0.21□□□□□ -2.38
RTN3O95197 RNU7-48P-201ENST00000458875 63 ntBASIC0.21□□□□□ -2.38
RTN3O95197 Y_RNA.692-201ENST00000516627 105 ntBASIC0.21□□□□□ -2.38
RTN3O95197 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
RTN3O95197 MIR4802-201ENST00000581881 80 ntBASIC0.21□□□□□ -2.38
RTN3O95197 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
RTN3O95197 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
RTN3O95197 Y_RNA.98-201ENST00000363109 102 ntBASIC0.2□□□□□ -2.38
RTN3O95197 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
RTN3O95197 MIR5589-201ENST00000579442 60 ntBASIC0.2□□□□□ -2.38
RTN3O95197 Y_RNA.49-201ENST00000362714 112 ntBASIC0.19□□□□□ -2.38
RTN3O95197 SNORD115-24-201ENST00000363528 82 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-915P-201ENST00000364943 103 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-1130P-201ENST00000365434 107 ntBASIC0.19□□□□□ -2.38
RTN3O95197 SNORD116-18-201ENST00000383961 92 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-460P-201ENST00000391158 108 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-394P-201ENST00000410735 107 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-848P-201ENST00000515948 107 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-617P-201ENST00000516147 107 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-473P-201ENST00000516164 107 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-1049P-201ENST00000516414 107 ntBASIC0.19□□□□□ -2.38
RTN3O95197 MIR3121-201ENST00000579680 77 ntBASIC0.19□□□□□ -2.38
RTN3O95197 RNU6-1104P-201ENST00000384723 104 ntBASIC0.18□□□□□ -2.38
RTN3O95197 RNU7-2P-201ENST00000516096 62 ntBASIC0.18□□□□□ -2.38
RTN3O95197 MIR4500-201ENST00000579472 76 ntBASIC0.18□□□□□ -2.38
RTN3O95197 AP001362.1-201ENST00000625165 124 ntBASIC0.18□□□□□ -2.38
RTN3O95197 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
RTN3O95197 PCNPP3-201ENST00000393579 471 ntBASIC0.17□□□□□ -2.38
RTN3O95197 MIR6755-201ENST00000619993 66 ntBASIC0.17□□□□□ -2.38
RTN3O95197 RNU6-865P-201ENST00000364772 107 ntBASIC0.16□□□□□ -2.38
RTN3O95197 Y_RNA.423-201ENST00000384057 113 ntBASIC0.16□□□□□ -2.38
RTN3O95197 MIR635-201ENST00000384830 98 ntBASIC0.16□□□□□ -2.38
RTN3O95197 SNORD115-35-201ENST00000365122 82 ntBASIC0.15□□□□□ -2.39
RTN3O95197 RNU6-616P-201ENST00000384353 107 ntBASIC0.15□□□□□ -2.39
RTN3O95197 AP001328.1-201ENST00000528550 176 ntBASIC0.15□□□□□ -2.39
RTN3O95197 MIR548X2-201ENST00000579776 100 ntBASIC0.15□□□□□ -2.39
RTN3O95197 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.15□□□□□ -2.39
RTN3O95197 Y_RNA.127-201ENST00000363386 109 ntBASIC0.14□□□□□ -2.39
RTN3O95197 Y_RNA.170-201ENST00000363746 110 ntBASIC0.14□□□□□ -2.39
RTN3O95197 Y_RNA.270-201ENST00000364693 104 ntBASIC0.14□□□□□ -2.39
RTN3O95197 Y_RNA.328-201ENST00000365208 113 ntBASIC0.14□□□□□ -2.39
RTN3O95197 RNU6-187P-201ENST00000384139 106 ntBASIC0.14□□□□□ -2.39
RTN3O95197 MIR548L-201ENST00000408303 86 ntBASIC0.14□□□□□ -2.39
RTN3O95197 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
RTN3O95197 MIR3144-201ENST00000579460 79 ntBASIC0.14□□□□□ -2.39
RTN3O95197 AL627230.5-201ENST00000619807 58 ntBASIC0.14□□□□□ -2.39
RTN3O95197 AP001340.1-201ENST00000624405 217 ntBASIC0.14□□□□□ -2.39
RTN3O95197 RNU6-647P-201ENST00000364243 107 ntBASIC0.13□□□□□ -2.39
RTN3O95197 MIR548I2-201ENST00000408348 149 ntBASIC0.13□□□□□ -2.39
RTN3O95197 MIR3163-201ENST00000581592 73 ntBASIC0.13□□□□□ -2.39
RTN3O95197 FTX_2.1-201ENST00000618816 94 ntBASIC0.13□□□□□ -2.39
RTN3O95197 Y_RNA.8-201ENST00000362353 102 ntBASIC0.12□□□□□ -2.39
RTN3O95197 SNORA42.1-201ENST00000363515 137 ntBASIC0.12□□□□□ -2.39
RTN3O95197 RNU6-726P-201ENST00000364680 107 ntBASIC0.12□□□□□ -2.39
RTN3O95197 RNU6-804P-201ENST00000384286 107 ntBASIC0.12□□□□□ -2.39
RTN3O95197 RNU6-1307P-201ENST00000391012 103 ntBASIC0.12□□□□□ -2.39
RTN3O95197 RNU7-6P-201ENST00000516845 62 ntBASIC0.12□□□□□ -2.39
RTN3O95197 Y_RNA.114-201ENST00000363265 113 ntBASIC0.11□□□□□ -2.39
RTN3O95197 SNORA2A-201ENST00000383885 135 ntBASIC0.11□□□□□ -2.39
RTN3O95197 Y_RNA.400-201ENST00000383963 111 ntBASIC0.11□□□□□ -2.39
RTN3O95197 Y_RNA.549-201ENST00000384657 102 ntBASIC0.11□□□□□ -2.39
RTN3O95197 MIR759-201ENST00000390224 91 ntBASIC0.11□□□□□ -2.39
RTN3O95197 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.11□□□□□ -2.39
RTN3O95197 AC097635.1-201ENST00000450678 155 ntBASIC0.11□□□□□ -2.39
RTN3O95197 RNU7-104P-201ENST00000459398 79 ntBASIC0.11□□□□□ -2.39
RTN3O95197 RNU7-161P-201ENST00000517289 62 ntBASIC0.11□□□□□ -2.39
RTN3O95197 IGKV1-22-201ENST00000524313 326 ntBASIC0.11□□□□□ -2.39
RTN3O95197 Y_RNA.213-201ENST00000364178 111 ntBASIC0.1□□□□□ -2.39
RTN3O95197 Y_RNA.420-201ENST00000384043 110 ntBASIC0.1□□□□□ -2.39
RTN3O95197 MIR760-201ENST00000390220 80 ntBASIC0.1□□□□□ -2.39
RTN3O95197 BX276092.1-201ENST00000427368 251 ntBASIC0.1□□□□□ -2.39
RTN3O95197 TRAJ51-201ENST00000504127 63 ntBASIC0.1□□□□□ -2.39
RTN3O95197 RN7SKP19-201ENST00000516016 252 ntBASIC0.1□□□□□ -2.39
RTN3O95197 MIR376B-201ENST00000614515 100 ntBASIC0.1□□□□□ -2.39
RTN3O95197 AC087741.2-201ENST00000619415 172 ntBASIC0.1□□□□□ -2.39
RTN3O95197 SNORD115-19-201ENST00000363098 82 ntBASIC0.09□□□□□ -2.4
RTN3O95197 SNORD115-18-201ENST00000363293 82 ntBASIC0.09□□□□□ -2.4
RTN3O95197 RNA5SP403-201ENST00000363598 108 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms