Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
SNX2O60749 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
SNX2O60749 RNU6-448P-201ENST00000517052 107 ntBASIC0.88□□□□□ -2.27
SNX2O60749 MIR6734-201ENST00000621166 68 ntBASIC0.88□□□□□ -2.27
SNX2O60749 Y_RNA.281-201ENST00000364774 94 ntBASIC0.87□□□□□ -2.27
SNX2O60749 Y_RNA.291-201ENST00000364886 113 ntBASIC0.87□□□□□ -2.27
SNX2O60749 U8.6-201ENST00000364939 135 ntBASIC0.87□□□□□ -2.27
SNX2O60749 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SNX2O60749 RNU6-733P-201ENST00000410759 104 ntBASIC0.87□□□□□ -2.27
SNX2O60749 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
SNX2O60749 AC002350.1-201ENST00000490759 375 ntBASIC0.87□□□□□ -2.27
SNX2O60749 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
SNX2O60749 AL512310.12-203ENST00000640543 90 ntBASIC0.87□□□□□ -2.27
SNX2O60749 RNU6-834P-201ENST00000362367 110 ntBASIC0.86□□□□□ -2.27
SNX2O60749 RNU6-1313P-201ENST00000362622 102 ntBASIC0.86□□□□□ -2.27
SNX2O60749 Y_RNA.247-201ENST00000364500 92 ntBASIC0.86□□□□□ -2.27
SNX2O60749 Y_RNA.309-201ENST00000365046 111 ntBASIC0.86□□□□□ -2.27
SNX2O60749 RNU6-291P-201ENST00000384720 107 ntBASIC0.86□□□□□ -2.27
SNX2O60749 MIR1912-201ENST00000410389 80 ntBASIC0.86□□□□□ -2.27
SNX2O60749 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.86□□□□□ -2.27
SNX2O60749 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.86□□□□□ -2.27
SNX2O60749 Y_RNA.697-201ENST00000516776 113 ntBASIC0.86□□□□□ -2.27
SNX2O60749 MIR3612-201ENST00000579753 87 ntBASIC0.86□□□□□ -2.27
SNX2O60749 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
SNX2O60749 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
SNX2O60749 Y_RNA.273-201ENST00000364703 102 ntBASIC0.85□□□□□ -2.27
SNX2O60749 Y_RNA.536-201ENST00000384621 113 ntBASIC0.85□□□□□ -2.27
SNX2O60749 SNORD100-201ENST00000408573 76 ntBASIC0.85□□□□□ -2.27
SNX2O60749 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.85□□□□□ -2.27
SNX2O60749 RNA5SP220-201ENST00000516298 104 ntBASIC0.85□□□□□ -2.27
SNX2O60749 RNU6-1006P-201ENST00000516998 103 ntBASIC0.85□□□□□ -2.27
SNX2O60749 AP003327.1-201ENST00000529684 127 ntBASIC0.85□□□□□ -2.27
SNX2O60749 MIR5009-201ENST00000578736 100 ntBASIC0.85□□□□□ -2.27
SNX2O60749 RNA5SP245-201ENST00000364239 121 ntBASIC0.84□□□□□ -2.27
SNX2O60749 MIR518E-201ENST00000385252 88 ntBASIC0.84□□□□□ -2.27
SNX2O60749 BX276092.1-201ENST00000427368 251 ntBASIC0.84□□□□□ -2.27
SNX2O60749 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.84□□□□□ -2.27
SNX2O60749 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.84□□□□□ -2.27
SNX2O60749 RNU6-1194P-201ENST00000516208 104 ntBASIC0.84□□□□□ -2.27
SNX2O60749 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.84□□□□□ -2.27
SNX2O60749 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.84□□□□□ -2.27
SNX2O60749 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SNX2O60749 Y_RNA.32-201ENST00000362589 110 ntBASIC0.83□□□□□ -2.28
SNX2O60749 RNU6-1107P-201ENST00000364817 104 ntBASIC0.83□□□□□ -2.28
SNX2O60749 RNU6-42P-201ENST00000384165 107 ntBASIC0.83□□□□□ -2.28
SNX2O60749 RNU6-1201P-201ENST00000384227 107 ntBASIC0.83□□□□□ -2.28
SNX2O60749 RNU6-535P-201ENST00000384722 107 ntBASIC0.83□□□□□ -2.28
SNX2O60749 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
SNX2O60749 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
SNX2O60749 RNU6-589P-201ENST00000516485 107 ntBASIC0.83□□□□□ -2.28
SNX2O60749 RNU6-1018P-201ENST00000516577 106 ntBASIC0.83□□□□□ -2.28
SNX2O60749 uc_338.16-201ENST00000621804 95 ntBASIC0.83□□□□□ -2.28
SNX2O60749 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
SNX2O60749 MIR101-2-201ENST00000362195 79 ntBASIC0.82□□□□□ -2.28
SNX2O60749 Y_RNA.323-201ENST00000365157 109 ntBASIC0.82□□□□□ -2.28
SNX2O60749 Y_RNA.355-201ENST00000365462 98 ntBASIC0.82□□□□□ -2.28
SNX2O60749 RNU6-1014P-201ENST00000383940 103 ntBASIC0.82□□□□□ -2.28
SNX2O60749 RNY1P8-201ENST00000383970 114 ntBASIC0.82□□□□□ -2.28
SNX2O60749 MIR577-201ENST00000385196 96 ntBASIC0.82□□□□□ -2.28
SNX2O60749 Y_RNA.629-201ENST00000411368 105 ntBASIC0.82□□□□□ -2.28
SNX2O60749 SNORA31.14-201ENST00000516728 116 ntBASIC0.82□□□□□ -2.28
SNX2O60749 MIR548AI-201ENST00000579940 88 ntBASIC0.82□□□□□ -2.28
SNX2O60749 MIR6788-201ENST00000618842 66 ntBASIC0.82□□□□□ -2.28
SNX2O60749 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.82□□□□□ -2.28
SNX2O60749 MIR18A-201ENST00000362310 71 ntBASIC0.81□□□□□ -2.28
SNX2O60749 Y_RNA.49-201ENST00000362714 112 ntBASIC0.81□□□□□ -2.28
SNX2O60749 RNA5SP117-201ENST00000365294 118 ntBASIC0.81□□□□□ -2.28
SNX2O60749 Y_RNA.508-201ENST00000384502 114 ntBASIC0.81□□□□□ -2.28
SNX2O60749 AL606490.4-201ENST00000423117 127 ntBASIC0.81□□□□□ -2.28
SNX2O60749 RNU6-412P-201ENST00000516434 106 ntBASIC0.81□□□□□ -2.28
SNX2O60749 MIR3613-201ENST00000579844 87 ntBASIC0.81□□□□□ -2.28
SNX2O60749 MIR151B-201ENST00000584249 96 ntBASIC0.81□□□□□ -2.28
SNX2O60749 AL442128.1-201ENST00000615151 90 ntBASIC0.81□□□□□ -2.28
SNX2O60749 Y_RNA.118-201ENST00000363300 101 ntBASIC0.8□□□□□ -2.28
SNX2O60749 RNU6-1325P-201ENST00000364905 105 ntBASIC0.8□□□□□ -2.28
SNX2O60749 MIR644A-201ENST00000385262 94 ntBASIC0.8□□□□□ -2.28
SNX2O60749 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
SNX2O60749 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.8□□□□□ -2.28
SNX2O60749 Y_RNA.56-201ENST00000362798 112 ntBASIC0.79□□□□□ -2.28
SNX2O60749 RNU6-1099P-201ENST00000363533 107 ntBASIC0.79□□□□□ -2.28
SNX2O60749 SNORD38.1-201ENST00000363863 68 ntBASIC0.79□□□□□ -2.28
SNX2O60749 SNORD20-201ENST00000384550 80 ntBASIC0.79□□□□□ -2.28
SNX2O60749 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
SNX2O60749 SNRPGP12-201ENST00000449481 213 ntBASIC0.79□□□□□ -2.28
SNX2O60749 Y_RNA.709-201ENST00000516952 92 ntBASIC0.79□□□□□ -2.28
SNX2O60749 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
SNX2O60749 MIR4694-201ENST00000578534 80 ntBASIC0.79□□□□□ -2.28
SNX2O60749 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
SNX2O60749 RNU6-832P-201ENST00000363319 107 ntBASIC0.78□□□□□ -2.28
SNX2O60749 AC092628.1-201ENST00000436250 252 ntBASIC0.78□□□□□ -2.28
SNX2O60749 SPINT5P-201ENST00000448174 155 ntBASIC0.78□□□□□ -2.28
SNX2O60749 TRAJ51-201ENST00000504127 63 ntBASIC0.78□□□□□ -2.28
SNX2O60749 MTND5P40-201ENST00000559945 246 ntBASIC0.78□□□□□ -2.28
SNX2O60749 MIR3678-201ENST00000578455 94 ntBASIC0.78□□□□□ -2.28
SNX2O60749 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
SNX2O60749 RNY3P2-201ENST00000362918 102 ntBASIC0.77□□□□□ -2.29
SNX2O60749 Y_RNA.377-201ENST00000365644 108 ntBASIC0.77□□□□□ -2.29
SNX2O60749 SNORA36.2-201ENST00000384004 127 ntBASIC0.77□□□□□ -2.29
SNX2O60749 RNY4P18-201ENST00000391107 89 ntBASIC0.77□□□□□ -2.29
SNX2O60749 MIR548G-201ENST00000408442 89 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 281.5 ms