Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
SLC28A2O43868 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
SLC28A2O43868 MIR2115-201ENST00000516657 100 ntBASIC1.19□□□□□ -2.22
SLC28A2O43868 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
SLC28A2O43868 AC026421.1-201ENST00000519101 163 ntBASIC1.19□□□□□ -2.22
SLC28A2O43868 MIR4264-201ENST00000583520 66 ntBASIC1.19□□□□□ -2.22
SLC28A2O43868 RNU6-86P-201ENST00000606534 107 ntBASIC1.19□□□□□ -2.22
SLC28A2O43868 Y_RNA.190-201ENST00000363964 101 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 RNU6-865P-201ENST00000364772 107 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 Y_RNA.558-201ENST00000384685 113 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 MIR193B-201ENST00000384907 83 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 MIR1302-4-201ENST00000408701 150 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 RNA5SP95-201ENST00000410319 137 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 MIR5000-201ENST00000577717 103 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 MIR4439-201ENST00000583746 80 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 SEPT14P17-201ENST00000617978 177 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
SLC28A2O43868 MIR103A2-201ENST00000362154 78 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 Y_RNA.388-201ENST00000383919 113 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 U8.15-201ENST00000390947 134 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 RNU6-1165P-201ENST00000410119 107 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.17□□□□□ -2.22
SLC28A2O43868 RNU7-62P-201ENST00000458856 62 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 Y_RNA.705-201ENST00000516862 110 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 AP000753.3-201ENST00000604083 169 ntBASIC1.17□□□□□ -2.22
SLC28A2O43868 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SLC28A2O43868 RNU6-580P-201ENST00000365159 107 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 RNU6-813P-201ENST00000384691 107 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 RNU6-972P-201ENST00000391208 107 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 MIR548G-201ENST00000408442 89 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 RNU6-613P-201ENST00000410412 108 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 RNU6-887P-201ENST00000410660 100 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 RNY4P29-201ENST00000410801 97 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 AC133485.1-201ENST00000567176 124 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 AP001362.1-201ENST00000625165 124 ntBASIC1.16□□□□□ -2.22
SLC28A2O43868 Y_RNA.168-201ENST00000363740 102 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 RNY1P2-201ENST00000364820 117 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 SNORD58A-201ENST00000383875 65 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 Y_RNA.567-201ENST00000384736 106 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 AC138749.4-201ENST00000563970 127 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 AC062037.1-201ENST00000605302 128 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 RNU6-90P-201ENST00000606352 106 ntBASIC1.15□□□□□ -2.23
SLC28A2O43868 MIR377-201ENST00000362145 69 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 Y_RNA.96-201ENST00000363092 109 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 RNA5SP457-201ENST00000363657 124 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 Y_RNA.173-201ENST00000363776 113 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 Y_RNA.363-201ENST00000365529 113 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SLC28A2O43868 SNORA26.2-201ENST00000390922 122 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 SPINT5P-201ENST00000448174 155 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.14□□□□□ -2.23
SLC28A2O43868 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.14□□□□□ -2.23
SLC28A2O43868 MIR1273G-201ENST00000577677 100 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 AC103810.7-201ENST00000607821 91 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
SLC28A2O43868 HSBP1P2-201ENST00000299671 229 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 Y_RNA.17-201ENST00000362433 111 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 RNA5SP327-201ENST00000362494 101 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 RNU6-1244P-201ENST00000363614 108 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 RNU6-1134P-201ENST00000365156 101 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 MIR450A2-201ENST00000385022 100 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 Y_RNA.593-201ENST00000410292 98 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 MTND5P40-201ENST00000559945 246 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 AC020891.4-201ENST00000605745 93 ntBASIC1.13□□□□□ -2.23
SLC28A2O43868 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 Y_RNA.433-201ENST00000384089 102 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 SNORD38.2-201ENST00000384470 69 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 MT-TF-201ENST00000387314 71 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 snoU13.21-201ENST00000459368 105 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 SNORA31.2-201ENST00000516019 134 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 Y_RNA.681-201ENST00000516445 113 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 MIR4500-201ENST00000579472 76 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 U6.109-201ENST00000636749 87 ntBASIC1.12□□□□□ -2.23
SLC28A2O43868 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
SLC28A2O43868 Y_RNA.115-201ENST00000363272 98 ntBASIC1.11□□□□□ -2.23
SLC28A2O43868 Y_RNA.119-201ENST00000363301 96 ntBASIC1.11□□□□□ -2.23
SLC28A2O43868 RNA5SP133-201ENST00000363368 119 ntBASIC1.11□□□□□ -2.23
SLC28A2O43868 SNORA2B-201ENST00000384583 137 ntBASIC1.11□□□□□ -2.23
SLC28A2O43868 MIR18B-201ENST00000454574 71 ntBASIC1.11□□□□□ -2.23
SLC28A2O43868 AC090897.1-201ENST00000580909 226 ntBASIC1.11□□□□□ -2.23
SLC28A2O43868 AL590095.2-201ENST00000604136 117 ntBASIC1.11□□□□□ -2.23
SLC28A2O43868 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
SLC28A2O43868 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
SLC28A2O43868 MIR494-201ENST00000349529 81 ntBASIC1.1□□□□□ -2.23
SLC28A2O43868 SNORD116-10-201ENST00000363791 102 ntBASIC1.1□□□□□ -2.23
SLC28A2O43868 Y_RNA.330-201ENST00000365230 109 ntBASIC1.1□□□□□ -2.23
SLC28A2O43868 RNU6-820P-201ENST00000384273 107 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms