Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 SNORD115-35-201ENST00000365122 82 ntBASIC0.65□□□□□ -2.31
NCK2O43639 SNORD58C-201ENST00000365223 64 ntBASIC0.65□□□□□ -2.31
NCK2O43639 RNU6-291P-201ENST00000384720 107 ntBASIC0.65□□□□□ -2.31
NCK2O43639 RNU6-535P-201ENST00000384722 107 ntBASIC0.65□□□□□ -2.31
NCK2O43639 RNU6-1321P-201ENST00000390905 107 ntBASIC0.65□□□□□ -2.31
NCK2O43639 Y_RNA.586-201ENST00000391146 98 ntBASIC0.65□□□□□ -2.31
NCK2O43639 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
NCK2O43639 AC087741.2-201ENST00000619415 172 ntBASIC0.65□□□□□ -2.31
NCK2O43639 AP001362.1-201ENST00000625165 124 ntBASIC0.65□□□□□ -2.31
NCK2O43639 Y_RNA.56-201ENST00000362798 112 ntBASIC0.64□□□□□ -2.31
NCK2O43639 RNY4P6-201ENST00000363667 96 ntBASIC0.64□□□□□ -2.31
NCK2O43639 RNU6-865P-201ENST00000364772 107 ntBASIC0.64□□□□□ -2.31
NCK2O43639 Y_RNA.448-201ENST00000384185 108 ntBASIC0.64□□□□□ -2.31
NCK2O43639 RNU6-616P-201ENST00000384353 107 ntBASIC0.64□□□□□ -2.31
NCK2O43639 AC025166.1-201ENST00000612411 163 ntBASIC0.64□□□□□ -2.31
NCK2O43639 AC105081.1-201ENST00000617727 106 ntBASIC0.64□□□□□ -2.31
NCK2O43639 Y_RNA.328-201ENST00000365208 113 ntBASIC0.63□□□□□ -2.31
NCK2O43639 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
NCK2O43639 MIR1197-201ENST00000408818 88 ntBASIC0.63□□□□□ -2.31
NCK2O43639 MIR548H5-201ENST00000580314 60 ntBASIC0.63□□□□□ -2.31
NCK2O43639 AC092634.7-201ENST00000621022 103 ntBASIC0.63□□□□□ -2.31
NCK2O43639 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
NCK2O43639 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
NCK2O43639 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
NCK2O43639 RNU6-781P-201ENST00000516377 101 ntBASIC0.62□□□□□ -2.31
NCK2O43639 RNU6-1061P-201ENST00000516530 99 ntBASIC0.62□□□□□ -2.31
NCK2O43639 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
NCK2O43639 MIR3133-201ENST00000583157 78 ntBASIC0.62□□□□□ -2.31
NCK2O43639 Y_RNA.32-201ENST00000362589 110 ntBASIC0.61□□□□□ -2.31
NCK2O43639 RNU6-235P-201ENST00000362644 107 ntBASIC0.61□□□□□ -2.31
NCK2O43639 RNU6-704P-201ENST00000364162 103 ntBASIC0.61□□□□□ -2.31
NCK2O43639 RNU6-80P-201ENST00000384195 107 ntBASIC0.61□□□□□ -2.31
NCK2O43639 MIR548D2-201ENST00000384955 97 ntBASIC0.61□□□□□ -2.31
NCK2O43639 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
NCK2O43639 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.61□□□□□ -2.31
NCK2O43639 RNU6-1211P-201ENST00000459179 105 ntBASIC0.61□□□□□ -2.31
NCK2O43639 SNORA31.14-201ENST00000516728 116 ntBASIC0.61□□□□□ -2.31
NCK2O43639 MTND5P34-201ENST00000568888 325 ntBASIC0.61□□□□□ -2.31
NCK2O43639 AC243829.6-201ENST00000612652 106 ntBASIC0.61□□□□□ -2.31
NCK2O43639 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
NCK2O43639 Y_RNA.127-201ENST00000363386 109 ntBASIC0.6□□□□□ -2.31
NCK2O43639 RNU6-1229P-201ENST00000364295 107 ntBASIC0.6□□□□□ -2.31
NCK2O43639 MT-TI-201ENST00000387365 69 ntBASIC0.6□□□□□ -2.31
NCK2O43639 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
NCK2O43639 RNY1P8-201ENST00000383970 114 ntBASIC0.59□□□□□ -2.31
NCK2O43639 RNU6-679P-201ENST00000391003 106 ntBASIC0.59□□□□□ -2.31
NCK2O43639 MIR548I2-201ENST00000408348 149 ntBASIC0.59□□□□□ -2.31
NCK2O43639 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
NCK2O43639 SNORD71-201ENST00000411292 86 ntBASIC0.59□□□□□ -2.31
NCK2O43639 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
NCK2O43639 RNU6-772P-201ENST00000516042 105 ntBASIC0.59□□□□□ -2.31
NCK2O43639 AC138869.1-201ENST00000568623 124 ntBASIC0.59□□□□□ -2.31
NCK2O43639 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.59□□□□□ -2.31
NCK2O43639 MIR4639-201ENST00000584938 69 ntBASIC0.59□□□□□ -2.31
NCK2O43639 MTND5P18-201ENST00000445624 1801 ntBASIC0.59□□□□□ -2.32
NCK2O43639 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
NCK2O43639 SNORD18A-201ENST00000363753 72 ntBASIC0.58□□□□□ -2.32
NCK2O43639 VTRNA1-3-201ENST00000365645 89 ntBASIC0.58□□□□□ -2.32
NCK2O43639 SNORD38.2-201ENST00000384470 69 ntBASIC0.58□□□□□ -2.32
NCK2O43639 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
NCK2O43639 RNU6-1234P-201ENST00000516877 103 ntBASIC0.58□□□□□ -2.32
NCK2O43639 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
NCK2O43639 AL157777.2-201ENST00000258070 137 ntBASIC0.57□□□□□ -2.32
NCK2O43639 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
NCK2O43639 Y_RNA.567-201ENST00000384736 106 ntBASIC0.57□□□□□ -2.32
NCK2O43639 MIR644A-201ENST00000385262 94 ntBASIC0.57□□□□□ -2.32
NCK2O43639 MIR548M-201ENST00000408260 86 ntBASIC0.57□□□□□ -2.32
NCK2O43639 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
NCK2O43639 RNU6-1099P-201ENST00000363533 107 ntBASIC0.56□□□□□ -2.32
NCK2O43639 SNORA50A-201ENST00000384225 134 ntBASIC0.56□□□□□ -2.32
NCK2O43639 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
NCK2O43639 AC244505.6-201ENST00000452829 130 ntBASIC0.56□□□□□ -2.32
NCK2O43639 RNU6-971P-201ENST00000516920 106 ntBASIC0.56□□□□□ -2.32
NCK2O43639 Y_RNA.712-201ENST00000517011 92 ntBASIC0.56□□□□□ -2.32
NCK2O43639 MIR4500-201ENST00000579472 76 ntBASIC0.56□□□□□ -2.32
NCK2O43639 RNA5SP517-201ENST00000364724 117 ntBASIC0.55□□□□□ -2.32
NCK2O43639 MIR635-201ENST00000384830 98 ntBASIC0.55□□□□□ -2.32
NCK2O43639 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.55□□□□□ -2.32
NCK2O43639 RNU6-863P-201ENST00000515989 104 ntBASIC0.55□□□□□ -2.32
NCK2O43639 RNU6-521P-201ENST00000516663 105 ntBASIC0.55□□□□□ -2.32
NCK2O43639 SCARNA16.5-201ENST00000517114 183 ntBASIC0.55□□□□□ -2.32
NCK2O43639 Y_RNA.773-201ENST00000607168 90 ntBASIC0.55□□□□□ -2.32
NCK2O43639 MIR376B-201ENST00000614515 100 ntBASIC0.55□□□□□ -2.32
NCK2O43639 MIR6828-201ENST00000636181 60 ntBASIC0.55□□□□□ -2.32
NCK2O43639 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.55□□□□□ -2.32
NCK2O43639 RNU6-363P-201ENST00000362895 105 ntBASIC0.54□□□□□ -2.32
NCK2O43639 RNU4-67P-201ENST00000364569 141 ntBASIC0.54□□□□□ -2.32
NCK2O43639 Y_RNA.360-201ENST00000365512 102 ntBASIC0.54□□□□□ -2.32
NCK2O43639 RNU6-571P-201ENST00000384128 107 ntBASIC0.54□□□□□ -2.32
NCK2O43639 SNORA8.2-201ENST00000384372 139 ntBASIC0.54□□□□□ -2.32
NCK2O43639 Y_RNA.507-201ENST00000384500 99 ntBASIC0.54□□□□□ -2.32
NCK2O43639 SNORD28-201ENST00000384706 75 ntBASIC0.54□□□□□ -2.32
NCK2O43639 RNU6-1018P-201ENST00000516577 106 ntBASIC0.54□□□□□ -2.32
NCK2O43639 RNA5SP47-201ENST00000517230 109 ntBASIC0.54□□□□□ -2.32
NCK2O43639 MIR4679-2-201ENST00000578358 77 ntBASIC0.54□□□□□ -2.32
NCK2O43639 U6.95-201ENST00000636931 70 ntBASIC0.54□□□□□ -2.32
NCK2O43639 MIR518A1-201ENST00000385068 85 ntBASIC0.53□□□□□ -2.32
NCK2O43639 RNU6-1307P-201ENST00000391012 103 ntBASIC0.53□□□□□ -2.32
NCK2O43639 MIR3914-2-201ENST00000637339 95 ntBASIC0.53□□□□□ -2.32
NCK2O43639 AC091304.10-201ENST00000641554 121 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms