Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR6835-201ENST00000621552 64 ntBASIC0.82□□□□□ -2.28
PRPF3O43395 AP001362.1-201ENST00000625165 124 ntBASIC0.82□□□□□ -2.28
PRPF3O43395 U6.95-201ENST00000636931 70 ntBASIC0.82□□□□□ -2.28
PRPF3O43395 AC132825.6-201ENST00000638861 357 ntBASIC0.82□□□□□ -2.28
PRPF3O43395 MIR18A-201ENST00000362310 71 ntBASIC0.81□□□□□ -2.28
PRPF3O43395 Y_RNA.328-201ENST00000365208 113 ntBASIC0.81□□□□□ -2.28
PRPF3O43395 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
PRPF3O43395 RNU6-521P-201ENST00000516663 105 ntBASIC0.81□□□□□ -2.28
PRPF3O43395 AC018659.1-201ENST00000551083 169 ntBASIC0.81□□□□□ -2.28
PRPF3O43395 Y_RNA.344-201ENST00000365381 112 ntBASIC0.8□□□□□ -2.28
PRPF3O43395 Y_RNA.536-201ENST00000384621 113 ntBASIC0.8□□□□□ -2.28
PRPF3O43395 AC008267.6-201ENST00000441664 139 ntBASIC0.8□□□□□ -2.28
PRPF3O43395 Y_RNA.649-201ENST00000459077 103 ntBASIC0.8□□□□□ -2.28
PRPF3O43395 SNORD33.1-201ENST00000516213 88 ntBASIC0.8□□□□□ -2.28
PRPF3O43395 RNU6-469P-201ENST00000516253 101 ntBASIC0.8□□□□□ -2.28
PRPF3O43395 uc_338.16-201ENST00000621804 95 ntBASIC0.8□□□□□ -2.28
PRPF3O43395 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PRPF3O43395 MIR101-2-201ENST00000362195 79 ntBASIC0.79□□□□□ -2.28
PRPF3O43395 RNU6-429P-201ENST00000384582 108 ntBASIC0.79□□□□□ -2.28
PRPF3O43395 RNU6-291P-201ENST00000384720 107 ntBASIC0.79□□□□□ -2.28
PRPF3O43395 RNU6-535P-201ENST00000384722 107 ntBASIC0.79□□□□□ -2.28
PRPF3O43395 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.79□□□□□ -2.28
PRPF3O43395 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
PRPF3O43395 RNU4-67P-201ENST00000364569 141 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 Y_RNA.362-201ENST00000365518 110 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 MIR140-201ENST00000385282 100 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 AC138907.6-201ENST00000568401 126 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 MIR1273G-201ENST00000577677 100 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 MIR4714-201ENST00000580728 77 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 RNU7-10P-201ENST00000607194 63 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 MIR376B-201ENST00000614515 100 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
PRPF3O43395 Y_RNA.261-201ENST00000364631 102 ntBASIC0.77□□□□□ -2.29
PRPF3O43395 Y_RNA.374-201ENST00000365606 101 ntBASIC0.77□□□□□ -2.29
PRPF3O43395 Y_RNA.507-201ENST00000384500 99 ntBASIC0.77□□□□□ -2.29
PRPF3O43395 MIR548A3-201ENST00000385297 97 ntBASIC0.77□□□□□ -2.29
PRPF3O43395 SNORA7.5-201ENST00000410672 110 ntBASIC0.77□□□□□ -2.29
PRPF3O43395 AC007012.1-201ENST00000567192 175 ntBASIC0.77□□□□□ -2.29
PRPF3O43395 MIR4500-201ENST00000579472 76 ntBASIC0.77□□□□□ -2.29
PRPF3O43395 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.77□□□□□ -2.29
PRPF3O43395 Y_RNA.32-201ENST00000362589 110 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 RNU6-363P-201ENST00000362895 105 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 RNU6-1117P-201ENST00000384525 104 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 MIR34C-201ENST00000384831 77 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 AL670379.3-201ENST00000605040 251 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 AL365222.1-201ENST00000614661 98 ntBASIC0.76□□□□□ -2.29
PRPF3O43395 RNA5SP457-201ENST00000363657 124 ntBASIC0.75□□□□□ -2.29
PRPF3O43395 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
PRPF3O43395 MIR548A1-201ENST00000385041 97 ntBASIC0.75□□□□□ -2.29
PRPF3O43395 RNU6-62P-201ENST00000516526 102 ntBASIC0.75□□□□□ -2.29
PRPF3O43395 SNORA31.14-201ENST00000516728 116 ntBASIC0.75□□□□□ -2.29
PRPF3O43395 MIR3678-201ENST00000578455 94 ntBASIC0.75□□□□□ -2.29
PRPF3O43395 Y_RNA.56-201ENST00000362798 112 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 SNORD114-23-201ENST00000363536 72 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 Y_RNA.155-201ENST00000363632 101 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 Y_RNA.353-201ENST00000365440 108 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 Y_RNA.360-201ENST00000365512 102 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 RNU6-409P-201ENST00000384114 104 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 Y_RNA.563-201ENST00000384707 108 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 RNU6-816P-201ENST00000390914 107 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 RNU6-1268P-201ENST00000391214 107 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 RNU6-1239P-201ENST00000391310 107 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 RPL39P34-201ENST00000477141 156 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.74□□□□□ -2.29
PRPF3O43395 RN7SKP12-201ENST00000516275 143 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 MIR4679-2-201ENST00000578358 77 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.74□□□□□ -2.29
PRPF3O43395 AL162726.3-218ENST00000636401 95 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 AC010487.4-201ENST00000637027 61 ntBASIC0.74□□□□□ -2.29
PRPF3O43395 Y_RNA.85-201ENST00000363014 111 ntBASIC0.73□□□□□ -2.29
PRPF3O43395 RNU6-22P-201ENST00000384355 107 ntBASIC0.73□□□□□ -2.29
PRPF3O43395 MIR644A-201ENST00000385262 94 ntBASIC0.73□□□□□ -2.29
PRPF3O43395 MIR1912-201ENST00000410389 80 ntBASIC0.73□□□□□ -2.29
PRPF3O43395 AL035470.1-201ENST00000622571 220 ntBASIC0.73□□□□□ -2.29
PRPF3O43395 AL512310.12-203ENST00000640543 90 ntBASIC0.73□□□□□ -2.29
PRPF3O43395 RNU6-679P-201ENST00000391003 106 ntBASIC0.72□□□□□ -2.29
PRPF3O43395 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
PRPF3O43395 RNU4-61P-201ENST00000411243 107 ntBASIC0.72□□□□□ -2.29
PRPF3O43395 RNU6-789P-201ENST00000517105 102 ntBASIC0.72□□□□□ -2.29
PRPF3O43395 MIR548H5-201ENST00000580314 60 ntBASIC0.72□□□□□ -2.29
PRPF3O43395 MIR924-201ENST00000638017 53 ntBASIC0.72□□□□□ -2.29
PRPF3O43395 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
PRPF3O43395 SNORA63.5-201ENST00000363548 123 ntBASIC0.71□□□□□ -2.3
PRPF3O43395 SNORD38.2-201ENST00000384470 69 ntBASIC0.71□□□□□ -2.3
PRPF3O43395 BX276092.1-201ENST00000427368 251 ntBASIC0.71□□□□□ -2.3
PRPF3O43395 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.71□□□□□ -2.3
PRPF3O43395 RNU6-1313P-201ENST00000362622 102 ntBASIC0.7□□□□□ -2.3
PRPF3O43395 RNA5SP245-201ENST00000364239 121 ntBASIC0.7□□□□□ -2.3
PRPF3O43395 Y_RNA.309-201ENST00000365046 111 ntBASIC0.7□□□□□ -2.3
PRPF3O43395 Y_RNA.549-201ENST00000384657 102 ntBASIC0.7□□□□□ -2.3
PRPF3O43395 RNU6-1168P-201ENST00000390831 104 ntBASIC0.7□□□□□ -2.3
PRPF3O43395 MIR936-201ENST00000401264 98 ntBASIC0.7□□□□□ -2.3
PRPF3O43395 RNU6-1018P-201ENST00000516577 106 ntBASIC0.7□□□□□ -2.3
PRPF3O43395 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
PRPF3O43395 AL353813.1-201ENST00000440700 253 ntBASIC0.69□□□□□ -2.3
PRPF3O43395 RNU4-54P-201ENST00000516428 129 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms