Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC006386.2-201ENST00000624491 75 ntBASIC1.92□□□□□ -2.1
PAX4O43316 AC012005.1-201ENST00000624575 75 ntBASIC1.92□□□□□ -2.1
PAX4O43316 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PAX4O43316 AC016717.2-201ENST00000609089 5141 ntBASIC1.91□□□□□ -2.1
PAX4O43316 Y_RNA.224-201ENST00000364308 111 ntBASIC1.91□□□□□ -2.1
PAX4O43316 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PAX4O43316 SNORD113-2-201ENST00000391082 72 ntBASIC1.91□□□□□ -2.1
PAX4O43316 AL359511.1-201ENST00000402970 211 ntBASIC1.91□□□□□ -2.1
PAX4O43316 AC098934.3-201ENST00000430450 190 ntBASIC1.91□□□□□ -2.1
PAX4O43316 AC105272.1-201ENST00000438604 198 ntBASIC1.91□□□□□ -2.1
PAX4O43316 RNU6-231P-201ENST00000517122 103 ntBASIC1.91□□□□□ -2.1
PAX4O43316 RNU7-10P-201ENST00000607194 63 ntBASIC1.91□□□□□ -2.1
PAX4O43316 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.9□□□□□ -2.1
PAX4O43316 RNA5SP48-201ENST00000363969 126 ntBASIC1.9□□□□□ -2.11
PAX4O43316 RNU6-302P-201ENST00000365249 107 ntBASIC1.9□□□□□ -2.11
PAX4O43316 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.9□□□□□ -2.11
PAX4O43316 MIR1185-1-201ENST00000408598 86 ntBASIC1.9□□□□□ -2.11
PAX4O43316 RNA5SP21-201ENST00000410917 96 ntBASIC1.9□□□□□ -2.11
PAX4O43316 RNA5SP501-201ENST00000410990 112 ntBASIC1.9□□□□□ -2.11
PAX4O43316 snoU13.13-201ENST00000458842 104 ntBASIC1.9□□□□□ -2.11
PAX4O43316 MIR6739-201ENST00000622461 75 ntBASIC1.9□□□□□ -2.11
PAX4O43316 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
PAX4O43316 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.9□□□□□ -2.11
PAX4O43316 RNU6-1246P-201ENST00000391064 107 ntBASIC1.89□□□□□ -2.11
PAX4O43316 RNU6-994P-201ENST00000410507 111 ntBASIC1.89□□□□□ -2.11
PAX4O43316 RNU7-185P-201ENST00000459215 60 ntBASIC1.89□□□□□ -2.11
PAX4O43316 RNU7-174P-201ENST00000516248 59 ntBASIC1.89□□□□□ -2.11
PAX4O43316 RNU6-922P-201ENST00000516753 99 ntBASIC1.89□□□□□ -2.11
PAX4O43316 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
PAX4O43316 MIR4635-201ENST00000583759 79 ntBASIC1.89□□□□□ -2.11
PAX4O43316 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
PAX4O43316 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PAX4O43316 RNU6-838P-201ENST00000363399 108 ntBASIC1.88□□□□□ -2.11
PAX4O43316 RNU6-525P-201ENST00000363685 104 ntBASIC1.88□□□□□ -2.11
PAX4O43316 MIR9-1-201ENST00000385198 89 ntBASIC1.88□□□□□ -2.11
PAX4O43316 SNORA48.1-201ENST00000390879 135 ntBASIC1.88□□□□□ -2.11
PAX4O43316 AL513328.1-201ENST00000446460 224 ntBASIC1.88□□□□□ -2.11
PAX4O43316 RNA5SP82-201ENST00000516707 92 ntBASIC1.88□□□□□ -2.11
PAX4O43316 AC026271.5-201ENST00000577873 130 ntBASIC1.88□□□□□ -2.11
PAX4O43316 MIR3670-2-201ENST00000582974 65 ntBASIC1.88□□□□□ -2.11
PAX4O43316 MIR3670-1-201ENST00000584160 65 ntBASIC1.88□□□□□ -2.11
PAX4O43316 MIR3670-3-201ENST00000584855 65 ntBASIC1.88□□□□□ -2.11
PAX4O43316 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.88□□□□□ -2.11
PAX4O43316 MIR3670-4-201ENST00000612260 65 ntBASIC1.88□□□□□ -2.11
PAX4O43316 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.88□□□□□ -2.11
PAX4O43316 U2.7-201ENST00000619197 100 ntBASIC1.88□□□□□ -2.11
PAX4O43316 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.88□□□□□ -2.11
PAX4O43316 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PAX4O43316 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.87□□□□□ -2.11
PAX4O43316 RNU6-859P-201ENST00000362728 107 ntBASIC1.87□□□□□ -2.11
PAX4O43316 SNORA2.1-201ENST00000363089 137 ntBASIC1.87□□□□□ -2.11
PAX4O43316 RNU1-112P-201ENST00000364401 164 ntBASIC1.87□□□□□ -2.11
PAX4O43316 RNU1-52P-201ENST00000384190 164 ntBASIC1.87□□□□□ -2.11
PAX4O43316 MT-TN-201ENST00000387400 73 ntBASIC1.87□□□□□ -2.11
PAX4O43316 SNORD116.2-201ENST00000391251 93 ntBASIC1.87□□□□□ -2.11
PAX4O43316 SNORD83.1-201ENST00000411362 77 ntBASIC1.87□□□□□ -2.11
PAX4O43316 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
PAX4O43316 AP003716.2-201ENST00000528260 108 ntBASIC1.87□□□□□ -2.11
PAX4O43316 MIR548X-201ENST00000580069 75 ntBASIC1.87□□□□□ -2.11
PAX4O43316 MIR548O2-201ENST00000616090 70 ntBASIC1.87□□□□□ -2.11
PAX4O43316 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PAX4O43316 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
PAX4O43316 SNORA5B-201ENST00000363786 132 ntBASIC1.86□□□□□ -2.11
PAX4O43316 Y_RNA.325-201ENST00000365171 122 ntBASIC1.86□□□□□ -2.11
PAX4O43316 MIR196B-201ENST00000384852 84 ntBASIC1.86□□□□□ -2.11
PAX4O43316 MIR194-1-201ENST00000384892 85 ntBASIC1.86□□□□□ -2.11
PAX4O43316 MIR524-201ENST00000385242 87 ntBASIC1.86□□□□□ -2.11
PAX4O43316 RNU6-269P-201ENST00000391077 97 ntBASIC1.86□□□□□ -2.11
PAX4O43316 SNORD109B-201ENST00000458961 67 ntBASIC1.86□□□□□ -2.11
PAX4O43316 SNORD109A-201ENST00000459128 67 ntBASIC1.86□□□□□ -2.11
PAX4O43316 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.86□□□□□ -2.11
PAX4O43316 AC138907.6-201ENST00000568401 126 ntBASIC1.86□□□□□ -2.11
PAX4O43316 AC138869.1-201ENST00000568623 124 ntBASIC1.86□□□□□ -2.11
PAX4O43316 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
PAX4O43316 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PAX4O43316 RNU6-580P-201ENST00000365159 107 ntBASIC1.85□□□□□ -2.11
PAX4O43316 DEFA7P-201ENST00000382676 285 ntBASIC1.85□□□□□ -2.11
PAX4O43316 RNU6-1126P-201ENST00000384002 107 ntBASIC1.85□□□□□ -2.11
PAX4O43316 RNU1-148P-201ENST00000384472 162 ntBASIC1.85□□□□□ -2.11
PAX4O43316 MIR144-201ENST00000384886 86 ntBASIC1.85□□□□□ -2.11
PAX4O43316 MIR7-2-201ENST00000384970 110 ntBASIC1.85□□□□□ -2.11
PAX4O43316 MIR29C-201ENST00000385231 88 ntBASIC1.85□□□□□ -2.11
PAX4O43316 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.85□□□□□ -2.11
PAX4O43316 MIR2115-201ENST00000516657 100 ntBASIC1.85□□□□□ -2.11
PAX4O43316 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
PAX4O43316 AC079600.2-201ENST00000550076 130 ntBASIC1.85□□□□□ -2.11
PAX4O43316 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.85□□□□□ -2.11
PAX4O43316 MIR4658-201ENST00000584344 65 ntBASIC1.85□□□□□ -2.11
PAX4O43316 AL645939.4-201ENST00000604495 135 ntBASIC1.85□□□□□ -2.11
PAX4O43316 MIR6895-201ENST00000613497 78 ntBASIC1.85□□□□□ -2.11
PAX4O43316 AC245884.12-201ENST00000615364 59 ntBASIC1.85□□□□□ -2.11
PAX4O43316 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
PAX4O43316 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.85□□□□□ -2.11
PAX4O43316 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PAX4O43316 RNU6-698P-201ENST00000363523 107 ntBASIC1.84□□□□□ -2.11
PAX4O43316 RNU6-34P-201ENST00000364874 107 ntBASIC1.84□□□□□ -2.11
PAX4O43316 RNU6V-201ENST00000384105 107 ntBASIC1.84□□□□□ -2.11
PAX4O43316 MIR517B-201ENST00000385102 67 ntBASIC1.84□□□□□ -2.11
PAX4O43316 RNA5SP210-201ENST00000391034 120 ntBASIC1.84□□□□□ -2.11
PAX4O43316 MIR18B-201ENST00000454574 71 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms