Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MIR583-201ENST00000384846 75 ntBASIC1.51□□□□□ -2.17
SHOXO15266 Y_RNA.593-201ENST00000410292 98 ntBASIC1.51□□□□□ -2.17
SHOXO15266 RNU7-40P-201ENST00000516397 64 ntBASIC1.51□□□□□ -2.17
SHOXO15266 Y_RNA.13-201ENST00000362403 112 ntBASIC1.5□□□□□ -2.17
SHOXO15266 RNU6-364P-201ENST00000384387 107 ntBASIC1.5□□□□□ -2.17
SHOXO15266 SNORA26.9-201ENST00000391322 122 ntBASIC1.5□□□□□ -2.17
SHOXO15266 MIR938-201ENST00000401216 83 ntBASIC1.5□□□□□ -2.17
SHOXO15266 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.5□□□□□ -2.17
SHOXO15266 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.5□□□□□ -2.17
SHOXO15266 MIR4419B-201ENST00000577260 68 ntBASIC1.5□□□□□ -2.17
SHOXO15266 MIR4668-201ENST00000582284 70 ntBASIC1.5□□□□□ -2.17
SHOXO15266 MIR4676-201ENST00000583078 72 ntBASIC1.5□□□□□ -2.17
SHOXO15266 AL512598.1-201ENST00000610158 273 ntBASIC1.5□□□□□ -2.17
SHOXO15266 AC025521.1-201ENST00000621624 286 ntBASIC1.5□□□□□ -2.17
SHOXO15266 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.5□□□□□ -2.17
SHOXO15266 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SHOXO15266 MIR494-201ENST00000349529 81 ntBASIC1.49□□□□□ -2.17
SHOXO15266 RNY1P10-201ENST00000363268 113 ntBASIC1.49□□□□□ -2.17
SHOXO15266 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
SHOXO15266 MIR518E-201ENST00000385252 88 ntBASIC1.49□□□□□ -2.17
SHOXO15266 Y_RNA.609-201ENST00000410669 89 ntBASIC1.49□□□□□ -2.17
SHOXO15266 AL161932.1-201ENST00000437408 146 ntBASIC1.49□□□□□ -2.17
SHOXO15266 RNA5SP182-201ENST00000516064 82 ntBASIC1.49□□□□□ -2.17
SHOXO15266 RNU7-156P-201ENST00000517214 74 ntBASIC1.49□□□□□ -2.17
SHOXO15266 AC062037.1-201ENST00000605302 128 ntBASIC1.49□□□□□ -2.17
SHOXO15266 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SHOXO15266 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SHOXO15266 MIR1-1-201ENST00000362147 71 ntBASIC1.48□□□□□ -2.17
SHOXO15266 SNORA25.9-201ENST00000365087 128 ntBASIC1.48□□□□□ -2.17
SHOXO15266 RNU6-675P-201ENST00000384236 104 ntBASIC1.48□□□□□ -2.17
SHOXO15266 MIR635-201ENST00000384830 98 ntBASIC1.48□□□□□ -2.17
SHOXO15266 MIR100-201ENST00000385259 80 ntBASIC1.48□□□□□ -2.17
SHOXO15266 RNU6-243P-201ENST00000391140 107 ntBASIC1.48□□□□□ -2.17
SHOXO15266 RNU6-1254P-201ENST00000391266 104 ntBASIC1.48□□□□□ -2.17
SHOXO15266 RNU6-519P-201ENST00000410590 108 ntBASIC1.48□□□□□ -2.17
SHOXO15266 RNU6-402P-201ENST00000410678 103 ntBASIC1.48□□□□□ -2.17
SHOXO15266 RNU6-977P-201ENST00000516411 103 ntBASIC1.48□□□□□ -2.17
SHOXO15266 AC020891.4-201ENST00000605745 93 ntBASIC1.48□□□□□ -2.17
SHOXO15266 Y_RNA.56-201ENST00000362798 112 ntBASIC1.47□□□□□ -2.17
SHOXO15266 MIR499A-201ENST00000384903 122 ntBASIC1.47□□□□□ -2.17
SHOXO15266 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SHOXO15266 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.47□□□□□ -2.17
SHOXO15266 SNORD100-201ENST00000408573 76 ntBASIC1.47□□□□□ -2.17
SHOXO15266 Y_RNA.697-201ENST00000516776 113 ntBASIC1.47□□□□□ -2.17
SHOXO15266 SNORD92-201ENST00000585078 85 ntBASIC1.47□□□□□ -2.17
SHOXO15266 AC013244.2-201ENST00000603396 103 ntBASIC1.47□□□□□ -2.17
SHOXO15266 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.47□□□□□ -2.17
SHOXO15266 AC027335.2-201ENST00000624030 375 ntBASIC1.47□□□□□ -2.17
SHOXO15266 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
SHOXO15266 Y_RNA.42-201ENST00000362660 108 ntBASIC1.46□□□□□ -2.18
SHOXO15266 RNY1P4-201ENST00000384595 115 ntBASIC1.46□□□□□ -2.18
SHOXO15266 Y_RNA.620-201ENST00000411009 88 ntBASIC1.46□□□□□ -2.18
SHOXO15266 snoU13.18-201ENST00000459483 104 ntBASIC1.46□□□□□ -2.18
SHOXO15266 AP003327.1-201ENST00000529684 127 ntBASIC1.46□□□□□ -2.18
SHOXO15266 AL136317.1-201ENST00000612653 226 ntBASIC1.46□□□□□ -2.18
SHOXO15266 RNU6-242P-201ENST00000384359 107 ntBASIC1.45□□□□□ -2.18
SHOXO15266 RNU1-119P-201ENST00000391122 165 ntBASIC1.45□□□□□ -2.18
SHOXO15266 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
SHOXO15266 SNORD63B-201ENST00000411005 70 ntBASIC1.45□□□□□ -2.18
SHOXO15266 AC015818.7-201ENST00000428754 109 ntBASIC1.45□□□□□ -2.18
SHOXO15266 AC087499.7-201ENST00000441958 109 ntBASIC1.45□□□□□ -2.18
SHOXO15266 Y_RNA.648-201ENST00000459455 110 ntBASIC1.45□□□□□ -2.18
SHOXO15266 snoU13.31-201ENST00000607291 104 ntBASIC1.45□□□□□ -2.18
SHOXO15266 RNU6-219P-201ENST00000364728 107 ntBASIC1.44□□□□□ -2.18
SHOXO15266 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SHOXO15266 Y_RNA.536-201ENST00000384621 113 ntBASIC1.44□□□□□ -2.18
SHOXO15266 AC002429.1-201ENST00000437672 148 ntBASIC1.44□□□□□ -2.18
SHOXO15266 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
SHOXO15266 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SHOXO15266 RNA5SP327-201ENST00000362494 101 ntBASIC1.43□□□□□ -2.18
SHOXO15266 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
SHOXO15266 Y_RNA.355-201ENST00000365462 98 ntBASIC1.43□□□□□ -2.18
SHOXO15266 Y_RNA.388-201ENST00000383919 113 ntBASIC1.43□□□□□ -2.18
SHOXO15266 MIR516A2-201ENST00000384888 90 ntBASIC1.43□□□□□ -2.18
SHOXO15266 MIR516A1-201ENST00000385033 90 ntBASIC1.43□□□□□ -2.18
SHOXO15266 MIR1827-201ENST00000408549 66 ntBASIC1.43□□□□□ -2.18
SHOXO15266 FABP5P4-201ENST00000437203 171 ntBASIC1.43□□□□□ -2.18
SHOXO15266 AC003989.2-201ENST00000440224 169 ntBASIC1.43□□□□□ -2.18
SHOXO15266 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
SHOXO15266 MIR4804-201ENST00000581683 73 ntBASIC1.43□□□□□ -2.18
SHOXO15266 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.43□□□□□ -2.18
SHOXO15266 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
SHOXO15266 MIR519A1-201ENST00000385257 85 ntBASIC1.42□□□□□ -2.18
SHOXO15266 RNU6-466P-201ENST00000391224 103 ntBASIC1.42□□□□□ -2.18
SHOXO15266 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
SHOXO15266 AC138907.6-201ENST00000568401 126 ntBASIC1.42□□□□□ -2.18
SHOXO15266 AC138869.1-201ENST00000568623 124 ntBASIC1.42□□□□□ -2.18
SHOXO15266 AL359821.1-201ENST00000605519 182 ntBASIC1.42□□□□□ -2.18
SHOXO15266 RNU6-633P-201ENST00000362612 103 ntBASIC1.41□□□□□ -2.18
SHOXO15266 RNU6-1152P-201ENST00000384576 107 ntBASIC1.41□□□□□ -2.18
SHOXO15266 MIR520F-201ENST00000384824 87 ntBASIC1.41□□□□□ -2.18
SHOXO15266 SNORA40.18-201ENST00000391200 128 ntBASIC1.41□□□□□ -2.18
SHOXO15266 RNU7-102P-201ENST00000458948 62 ntBASIC1.41□□□□□ -2.18
SHOXO15266 AC022137.1-201ENST00000483735 151 ntBASIC1.41□□□□□ -2.18
SHOXO15266 TRMT112P2-201ENST00000512910 132 ntBASIC1.41□□□□□ -2.18
SHOXO15266 AL645939.4-201ENST00000604495 135 ntBASIC1.41□□□□□ -2.18
SHOXO15266 SNORD36A-201ENST00000362874 73 ntBASIC1.4□□□□□ -2.19
SHOXO15266 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
SHOXO15266 AC092628.1-201ENST00000436250 252 ntBASIC1.4□□□□□ -2.19
SHOXO15266 AC097635.1-201ENST00000450678 155 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms