Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.22□□□□□ -2.37
NPHP1O15259 SNORD77B-201ENST00000391112 67 ntBASIC0.22□□□□□ -2.37
NPHP1O15259 RNU6-460P-201ENST00000391158 108 ntBASIC0.22□□□□□ -2.37
NPHP1O15259 AC073261.1-201ENST00000429409 121 ntBASIC0.22□□□□□ -2.37
NPHP1O15259 AC069271.1-201ENST00000445577 156 ntBASIC0.22□□□□□ -2.37
NPHP1O15259 RNA5SP395-201ENST00000516567 118 ntBASIC0.22□□□□□ -2.37
NPHP1O15259 AC069113.3-201ENST00000521019 150 ntBASIC0.22□□□□□ -2.37
NPHP1O15259 RNU6-35P-201ENST00000384530 107 ntBASIC0.21□□□□□ -2.38
NPHP1O15259 RNU6-182P-201ENST00000516970 105 ntBASIC0.21□□□□□ -2.38
NPHP1O15259 TUG1_4.1-201ENST00000619464 181 ntBASIC0.21□□□□□ -2.38
NPHP1O15259 RNU6-915P-201ENST00000364943 103 ntBASIC0.2□□□□□ -2.38
NPHP1O15259 SNORD116-18-201ENST00000383961 92 ntBASIC0.2□□□□□ -2.38
NPHP1O15259 AC244505.6-201ENST00000452829 130 ntBASIC0.2□□□□□ -2.38
NPHP1O15259 RNU7-48P-201ENST00000458875 63 ntBASIC0.2□□□□□ -2.38
NPHP1O15259 RNU6-1126P-201ENST00000384002 107 ntBASIC0.19□□□□□ -2.38
NPHP1O15259 Y_RNA.448-201ENST00000384185 108 ntBASIC0.19□□□□□ -2.38
NPHP1O15259 Y_RNA.692-201ENST00000516627 105 ntBASIC0.19□□□□□ -2.38
NPHP1O15259 AC138869.1-201ENST00000568623 124 ntBASIC0.19□□□□□ -2.38
NPHP1O15259 MIR548H5-201ENST00000580314 60 ntBASIC0.19□□□□□ -2.38
NPHP1O15259 MIR6755-201ENST00000619993 66 ntBASIC0.19□□□□□ -2.38
NPHP1O15259 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
NPHP1O15259 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
NPHP1O15259 Y_RNA.49-201ENST00000362714 112 ntBASIC0.18□□□□□ -2.38
NPHP1O15259 Y_RNA.98-201ENST00000363109 102 ntBASIC0.18□□□□□ -2.38
NPHP1O15259 SNORD115-24-201ENST00000363528 82 ntBASIC0.18□□□□□ -2.38
NPHP1O15259 RNU6-1307P-201ENST00000391012 103 ntBASIC0.18□□□□□ -2.38
NPHP1O15259 RNA5SP299-201ENST00000391203 116 ntBASIC0.18□□□□□ -2.38
NPHP1O15259 MIR513C-201ENST00000401352 84 ntBASIC0.18□□□□□ -2.38
NPHP1O15259 RNU7-2P-201ENST00000516096 62 ntBASIC0.18□□□□□ -2.38
NPHP1O15259 IGKV1-22-201ENST00000524313 326 ntBASIC0.18□□□□□ -2.38
NPHP1O15259 RNU6-804P-201ENST00000384286 107 ntBASIC0.17□□□□□ -2.38
NPHP1O15259 RNU6-616P-201ENST00000384353 107 ntBASIC0.17□□□□□ -2.38
NPHP1O15259 PCNPP3-201ENST00000393579 471 ntBASIC0.17□□□□□ -2.38
NPHP1O15259 MIR3144-201ENST00000579460 79 ntBASIC0.17□□□□□ -2.38
NPHP1O15259 MIR4500-201ENST00000579472 76 ntBASIC0.17□□□□□ -2.38
NPHP1O15259 MIR5190-201ENST00000581537 80 ntBASIC0.17□□□□□ -2.38
NPHP1O15259 FTX_2.1-201ENST00000618816 94 ntBASIC0.17□□□□□ -2.38
NPHP1O15259 AC067863.3-201ENST00000624172 122 ntBASIC0.17□□□□□ -2.38
NPHP1O15259 RNU6-187P-201ENST00000384139 106 ntBASIC0.16□□□□□ -2.38
NPHP1O15259 MIR548X2-201ENST00000579776 100 ntBASIC0.16□□□□□ -2.38
NPHP1O15259 RNU7-10P-201ENST00000607194 63 ntBASIC0.16□□□□□ -2.38
NPHP1O15259 AP001340.1-201ENST00000624405 217 ntBASIC0.16□□□□□ -2.38
NPHP1O15259 AP001362.1-201ENST00000625165 124 ntBASIC0.16□□□□□ -2.38
NPHP1O15259 Y_RNA.127-201ENST00000363386 109 ntBASIC0.15□□□□□ -2.39
NPHP1O15259 SNORD115-35-201ENST00000365122 82 ntBASIC0.15□□□□□ -2.39
NPHP1O15259 Y_RNA.328-201ENST00000365208 113 ntBASIC0.15□□□□□ -2.39
NPHP1O15259 RNU6-848P-201ENST00000515948 107 ntBASIC0.15□□□□□ -2.39
NPHP1O15259 RNU6-617P-201ENST00000516147 107 ntBASIC0.15□□□□□ -2.39
NPHP1O15259 RNU6-473P-201ENST00000516164 107 ntBASIC0.15□□□□□ -2.39
NPHP1O15259 RNU6-1049P-201ENST00000516414 107 ntBASIC0.15□□□□□ -2.39
NPHP1O15259 AP001328.1-201ENST00000528550 176 ntBASIC0.15□□□□□ -2.39
NPHP1O15259 Y_RNA.8-201ENST00000362353 102 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 Y_RNA.114-201ENST00000363265 113 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 RNU6-726P-201ENST00000364680 107 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 Y_RNA.398-201ENST00000383952 99 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 Y_RNA.423-201ENST00000384057 113 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 RNU6-886P-201ENST00000384319 105 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 MIR635-201ENST00000384830 98 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 MT-TI-201ENST00000387365 69 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 RNU7-161P-201ENST00000517289 62 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 AC087741.2-201ENST00000619415 172 ntBASIC0.14□□□□□ -2.39
NPHP1O15259 Y_RNA.150-201ENST00000363562 102 ntBASIC0.13□□□□□ -2.39
NPHP1O15259 Y_RNA.270-201ENST00000364693 104 ntBASIC0.13□□□□□ -2.39
NPHP1O15259 Y_RNA.400-201ENST00000383963 111 ntBASIC0.13□□□□□ -2.39
NPHP1O15259 MIR329-2-201ENST00000385029 84 ntBASIC0.13□□□□□ -2.39
NPHP1O15259 TRAJ51-201ENST00000504127 63 ntBASIC0.13□□□□□ -2.39
NPHP1O15259 RN7SKP19-201ENST00000516016 252 ntBASIC0.13□□□□□ -2.39
NPHP1O15259 RNU7-6P-201ENST00000516845 62 ntBASIC0.13□□□□□ -2.39
NPHP1O15259 MIR376B-201ENST00000614515 100 ntBASIC0.13□□□□□ -2.39
NPHP1O15259 SNORA9.1-201ENST00000362412 131 ntBASIC0.12□□□□□ -2.39
NPHP1O15259 RNA5SP403-201ENST00000363598 108 ntBASIC0.12□□□□□ -2.39
NPHP1O15259 RNU6-647P-201ENST00000364243 107 ntBASIC0.12□□□□□ -2.39
NPHP1O15259 RNU6-865P-201ENST00000364772 107 ntBASIC0.12□□□□□ -2.39
NPHP1O15259 Y_RNA.420-201ENST00000384043 110 ntBASIC0.12□□□□□ -2.39
NPHP1O15259 MIR548I2-201ENST00000408348 149 ntBASIC0.12□□□□□ -2.39
NPHP1O15259 AC108059.2-201ENST00000434626 151 ntBASIC0.12□□□□□ -2.39
NPHP1O15259 SNORD115-19-201ENST00000363098 82 ntBASIC0.11□□□□□ -2.39
NPHP1O15259 SNORD115-18-201ENST00000363293 82 ntBASIC0.11□□□□□ -2.39
NPHP1O15259 Y_RNA.215-201ENST00000364204 112 ntBASIC0.11□□□□□ -2.39
NPHP1O15259 SNORD115-17-201ENST00000364612 82 ntBASIC0.11□□□□□ -2.39
NPHP1O15259 BX276092.1-201ENST00000427368 251 ntBASIC0.11□□□□□ -2.39
NPHP1O15259 MIR4752-201ENST00000579672 72 ntBASIC0.11□□□□□ -2.39
NPHP1O15259 MIR3163-201ENST00000581592 73 ntBASIC0.11□□□□□ -2.39
NPHP1O15259 RNU1-29P-201ENST00000606574 126 ntBASIC0.11□□□□□ -2.39
NPHP1O15259 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 Y_RNA.198-201ENST00000364013 98 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 Y_RNA.294-201ENST00000364916 102 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 MIR569-201ENST00000385228 96 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 AC097635.1-201ENST00000450678 155 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 RNU7-104P-201ENST00000459398 79 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 AL162376.1-201ENST00000624117 175 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 AC021753.1-201ENST00000635724 168 ntBASIC0.1□□□□□ -2.39
NPHP1O15259 MIR599-201ENST00000385069 95 ntBASIC0.09□□□□□ -2.4
NPHP1O15259 MIR760-201ENST00000390220 80 ntBASIC0.09□□□□□ -2.4
NPHP1O15259 MIR548L-201ENST00000408303 86 ntBASIC0.09□□□□□ -2.4
NPHP1O15259 RNA5SP136-201ENST00000410906 107 ntBASIC0.09□□□□□ -2.4
NPHP1O15259 MTND5P41-201ENST00000517498 206 ntBASIC0.09□□□□□ -2.4
NPHP1O15259 MIR4768-201ENST00000585270 74 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 272 ms