Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.73□□□□□ -2.53
SMKR1H3BMG3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.73□□□□□ -2.53
SMKR1H3BMG3 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.73□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.73□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.73□□□□□ -2.53
SMKR1H3BMG3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.73□□□□□ -2.53
SMKR1H3BMG3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.73□□□□□ -2.53
SMKR1H3BMG3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.73□□□□□ -2.53
SMKR1H3BMG3 RNU6-616P-201ENST00000384353 107 ntBASIC-0.74□□□□□ -2.53
SMKR1H3BMG3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.74□□□□□ -2.53
SMKR1H3BMG3 SNORA75.5-201ENST00000391291 81 ntBASIC-0.74□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.74□□□□□ -2.53
SMKR1H3BMG3 RNU6-850P-201ENST00000516934 103 ntBASIC-0.74□□□□□ -2.53
SMKR1H3BMG3 MIR4460-201ENST00000577862 86 ntBASIC-0.74□□□□□ -2.53
SMKR1H3BMG3 MIR4645-201ENST00000583158 77 ntBASIC-0.74□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.75□□□□□ -2.53
SMKR1H3BMG3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.75□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.75□□□□□ -2.53
SMKR1H3BMG3 AC114755.3-201ENST00000481111 251 ntBASIC-0.75□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.76□□□□□ -2.53
SMKR1H3BMG3 SNORD18B-201ENST00000365659 72 ntBASIC-0.76□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.76□□□□□ -2.53
SMKR1H3BMG3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.76□□□□□ -2.53
SMKR1H3BMG3 MTND4LP11-201ENST00000422184 280 ntBASIC-0.76□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.76□□□□□ -2.53
SMKR1H3BMG3 AC044792.1-201ENST00000593294 196 ntBASIC-0.76□□□□□ -2.53
SMKR1H3BMG3 RNU4-84P-201ENST00000364200 139 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 RNU6-154P-201ENST00000384306 106 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 MIR516A2-201ENST00000384888 90 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 MIR516A1-201ENST00000385033 90 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 RNU2-38P-201ENST00000410856 79 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 MIR2113-201ENST00000459007 91 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 AC107027.2-201ENST00000512197 115 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 RNU6-175P-201ENST00000516896 107 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 AC087741.2-201ENST00000619415 172 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 uc_338.36-201ENST00000622331 158 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 MIR6844-201ENST00000637122 62 ntBASIC-0.77□□□□□ -2.53
SMKR1H3BMG3 SNORD114-31-201ENST00000363219 75 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 MTND2P23-201ENST00000422990 651 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 SNORD127-201ENST00000458892 86 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 MIR3646-201ENST00000578301 84 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 MIR4432-201ENST00000581823 84 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 MIR548AE1-201ENST00000583292 70 ntBASIC-0.78□□□□□ -2.53
SMKR1H3BMG3 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 MIR539-201ENST00000365690 78 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 MIR34C-201ENST00000384831 77 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 MT-TY-201ENST00000387409 66 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 SNORD58.1-201ENST00000391313 66 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 RNU6-588P-201ENST00000410281 105 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 RNU6-287P-201ENST00000516230 98 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 RNY4P20-201ENST00000516678 93 ntBASIC-0.79□□□□□ -2.54
SMKR1H3BMG3 SNORD27-201ENST00000363981 72 ntBASIC-0.8□□□□□ -2.54
SMKR1H3BMG3 SNORA51.5-201ENST00000384126 131 ntBASIC-0.8□□□□□ -2.54
SMKR1H3BMG3 SNORD38.2-201ENST00000384470 69 ntBASIC-0.8□□□□□ -2.54
SMKR1H3BMG3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.8□□□□□ -2.54
SMKR1H3BMG3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.8□□□□□ -2.54
SMKR1H3BMG3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.8□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 RNU6-309P-201ENST00000364573 106 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 RNU6-312P-201ENST00000364629 107 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 MIR548F4-201ENST00000408515 105 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 IGLVI-20-201ENST00000519296 130 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 AL137067.1-201ENST00000615933 120 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 AL109933.3-201ENST00000619095 188 ntBASIC-0.81□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.82□□□□□ -2.54
SMKR1H3BMG3 RNU6-508P-201ENST00000363231 103 ntBASIC-0.82□□□□□ -2.54
SMKR1H3BMG3 RNU6-867P-201ENST00000364956 107 ntBASIC-0.82□□□□□ -2.54
SMKR1H3BMG3 RNU6-47P-201ENST00000383866 107 ntBASIC-0.82□□□□□ -2.54
SMKR1H3BMG3 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.82□□□□□ -2.54
SMKR1H3BMG3 MIR329-2-201ENST00000385029 84 ntBASIC-0.82□□□□□ -2.54
SMKR1H3BMG3 RNU6-918P-201ENST00000391219 106 ntBASIC-0.82□□□□□ -2.54
SMKR1H3BMG3 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.82□□□□□ -2.54
SMKR1H3BMG3 MIR20A-201ENST00000362279 71 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 TRDV1-202ENST00000621643 102 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 AC093726.3-201ENST00000637588 150 ntBASIC-0.83□□□□□ -2.54
SMKR1H3BMG3 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms