Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.39□□□□□ -2.47
TRAV39A0A0B4J263 RNU7-13P-201ENST00000516413 62 ntBASIC-0.39□□□□□ -2.47
TRAV39A0A0B4J263 MIR6844-201ENST00000637122 62 ntBASIC-0.39□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 RNU6-46P-201ENST00000383860 107 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 SNORA75.5-201ENST00000391291 81 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 MIR548I2-201ENST00000408348 149 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 AC107027.2-201ENST00000512197 115 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 RNU7-2P-201ENST00000516096 62 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 CR383656.4-201ENST00000546909 122 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 MIR3920-201ENST00000581751 86 ntBASIC-0.4□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.41□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.41□□□□□ -2.48
TRAV39A0A0B4J263 SNORD18B-201ENST00000365659 72 ntBASIC-0.41□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-918P-201ENST00000391219 106 ntBASIC-0.41□□□□□ -2.48
TRAV39A0A0B4J263 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.41□□□□□ -2.48
TRAV39A0A0B4J263 SNORA25.13-201ENST00000516395 103 ntBASIC-0.41□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.42□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.42□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-524P-201ENST00000384270 107 ntBASIC-0.42□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-616P-201ENST00000384353 107 ntBASIC-0.42□□□□□ -2.48
TRAV39A0A0B4J263 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
TRAV39A0A0B4J263 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.42□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-170P-201ENST00000362832 104 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 SNORD114-28-201ENST00000363610 72 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-309P-201ENST00000364573 106 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 MIR3128-201ENST00000581957 66 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 MIR4473-201ENST00000583731 91 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 MIR3149-201ENST00000584629 83 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 MIR376B-201ENST00000614515 100 ntBASIC-0.43□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.44□□□□□ -2.48
TRAV39A0A0B4J263 SNORD49B-201ENST00000365172 72 ntBASIC-0.44□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-47P-201ENST00000383866 107 ntBASIC-0.44□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.44□□□□□ -2.48
TRAV39A0A0B4J263 SNORD37.2-201ENST00000391075 66 ntBASIC-0.44□□□□□ -2.48
TRAV39A0A0B4J263 MIR876-201ENST00000401147 81 ntBASIC-0.44□□□□□ -2.48
TRAV39A0A0B4J263 RNU7-74P-201ENST00000459104 62 ntBASIC-0.44□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.44□□□□□ -2.48
TRAV39A0A0B4J263 RNU1-141P-201ENST00000364623 158 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 SNORD58.1-201ENST00000391313 66 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 RNU7-106P-201ENST00000459514 67 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 RNU4-71P-201ENST00000516258 113 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-320P-201ENST00000516511 106 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 RNY4P20-201ENST00000516678 93 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 MIR5589-201ENST00000579442 60 ntBASIC-0.45□□□□□ -2.48
TRAV39A0A0B4J263 MIR148A-201ENST00000362215 68 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 SNORA63-201ENST00000363450 132 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 RNY1P11-201ENST00000363759 113 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 SNORD115-35-201ENST00000365122 82 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 MIR1912-201ENST00000410389 80 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 MTND5P40-201ENST00000559945 246 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 MIR3658-201ENST00000636291 56 ntBASIC-0.46□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 MIR519A1-201ENST00000385257 85 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-850P-201ENST00000516934 103 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-111P-201ENST00000517179 105 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 MIR3666-201ENST00000607845 111 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 RN7SL660P-201ENST00000614852 299 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 AL137067.1-201ENST00000615933 120 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.47□□□□□ -2.48
TRAV39A0A0B4J263 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 RNU6-312P-201ENST00000364629 107 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 U8.6-201ENST00000364939 135 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 MIR34C-201ENST00000384831 77 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 AC022559.1-201ENST00000520905 205 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 MIR3646-201ENST00000578301 84 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 AP001180.6-201ENST00000584918 159 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 AL162726.3-218ENST00000636401 95 ntBASIC-0.48□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 SNORA20.1-201ENST00000364790 130 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 RNU6-571P-201ENST00000384128 107 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 RNU6-738P-201ENST00000384531 106 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 MIR516A2-201ENST00000384888 90 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 MIR516A1-201ENST00000385033 90 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 AL603914.1-201ENST00000401964 204 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 MIR1302-3-201ENST00000408128 138 ntBASIC-0.49□□□□□ -2.49
TRAV39A0A0B4J263 Z95118.1-201ENST00000421372 247 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms