Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.401-201ENST00000383965 117 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.477-201ENST00000384352 108 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.588-201ENST00000391254 102 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 SNORA40.8-201ENST00000411034 126 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 MTATP6P21-201ENST00000440681 189 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU4-58P-201ENST00000363192 141 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU6-463P-201ENST00000384340 107 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 MIR206-201ENST00000384872 86 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 snosnR66.1-201ENST00000391095 99 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 AL603914.1-201ENST00000401964 204 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 AF228730.3-201ENST00000436691 102 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 SNORD67.1-201ENST00000516618 108 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.697-201ENST00000516776 113 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 MIR6841-201ENST00000637129 72 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU6-379P-201ENST00000363813 104 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.188-201ENST00000363952 111 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 RNU6-449P-201ENST00000383914 107 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 RPS29P8-201ENST00000445109 171 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 AC107027.2-201ENST00000512197 115 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 MIR3121-201ENST00000579680 77 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 AC244669.1-204ENST00000621564 178 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 MIR376A2-201ENST00000636782 80 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 snoU2_19.4-201ENST00000364329 80 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNU6-47P-201ENST00000383866 107 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR1270-201ENST00000459320 83 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 SNORA25.12-201ENST00000516202 82 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNA5SP33-201ENST00000516687 98 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNU6-861P-201ENST00000516745 106 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 SCARNA15-202ENST00000516881 127 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 AC138869.1-201ENST00000568623 124 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR548AX-201ENST00000580117 73 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 AC098479.1-201ENST00000609225 154 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR6082-201ENST00000613604 109 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR760-201ENST00000390220 80 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 SNORA75.5-201ENST00000391291 81 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNA5SP94-201ENST00000516917 108 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR3612-201ENST00000579753 87 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNU6-200P-201ENST00000364743 107 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNU6-275P-201ENST00000364910 107 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 SNORD28-201ENST00000384706 75 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 U8.15-201ENST00000390947 134 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNU6-1086P-201ENST00000410930 100 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.18□□□□□ -2.38
SHANK1Q9Y566 AC141846.1-201ENST00000568348 142 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.144-201ENST00000363521 113 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNA5SP117-201ENST00000365294 118 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.366-201ENST00000365540 102 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.400-201ENST00000383963 111 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNU6-429P-201ENST00000384582 108 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 SNORD12C-201ENST00000386307 89 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 IGKV1-22-201ENST00000524313 326 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 MIR5706-201ENST00000579841 80 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 MIR548H5-201ENST00000580314 60 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 AL137067.1-201ENST00000615933 120 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 SNORD77B-201ENST00000391112 67 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 SNORA68.3-201ENST00000515906 83 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 RNU6-469P-201ENST00000516253 101 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 MIR4503-201ENST00000582187 83 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 RNU7-10P-201ENST00000607194 63 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 AC099654.10-201ENST00000640395 161 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.362-201ENST00000365518 110 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 MIR588-201ENST00000384900 83 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 MIR548I2-201ENST00000408348 149 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-848P-201ENST00000515948 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-617P-201ENST00000516147 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-473P-201ENST00000516164 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-1049P-201ENST00000516414 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 MIR4645-201ENST00000583158 77 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-509P-201ENST00000363519 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.171-201ENST00000363760 102 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-682P-201ENST00000363843 106 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 AC138749.4-201ENST00000563970 127 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 AC105081.1-201ENST00000617727 106 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.778-201ENST00000620203 90 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 AC073869.9-201ENST00000641610 120 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.13-201ENST00000362403 112 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 SNORA22.1-201ENST00000362701 134 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNA5SP133-201ENST00000363368 119 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.441-201ENST00000384123 112 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNU7-161P-201ENST00000517289 62 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.29-201ENST00000362570 113 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNU6-978P-201ENST00000364371 103 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNA5SP517-201ENST00000364724 117 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 SNORD38.2-201ENST00000384470 69 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 MIR617-201ENST00000385030 97 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 MIR1207-201ENST00000408249 87 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNU6-588P-201ENST00000410281 105 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RN7SKP19-201ENST00000516016 252 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 279.7 ms