Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 SNORD116-25-201ENST00000516517 92 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 MIR548AX-201ENST00000580117 73 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 MIR6851-201ENST00000617060 67 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 MIR20A-201ENST00000362279 71 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-728P-201ENST00000365375 104 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-901P-201ENST00000384593 106 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 AC016907.1-201ENST00000419483 435 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 MTATP6P23-201ENST00000440153 476 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 AC011603.4-201ENST00000611325 277 ntBASIC-1.19□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.2□□□□□ -2.6
HDGFL3Q9Y3E1 SNORD83B-201ENST00000386745 93 ntBASIC-1.2□□□□□ -2.6
HDGFL3Q9Y3E1 MT-TY-201ENST00000387409 66 ntBASIC-1.2□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-881P-201ENST00000516813 102 ntBASIC-1.2□□□□□ -2.6
HDGFL3Q9Y3E1 AC073869.6-201ENST00000640656 341 ntBASIC-1.2□□□□□ -2.6
HDGFL3Q9Y3E1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.21□□□□□ -2.6
HDGFL3Q9Y3E1 MIR206-201ENST00000384872 86 ntBASIC-1.21□□□□□ -2.6
HDGFL3Q9Y3E1 AL589823.1-201ENST00000429577 183 ntBASIC-1.21□□□□□ -2.6
HDGFL3Q9Y3E1 RNU7-106P-201ENST00000459514 67 ntBASIC-1.21□□□□□ -2.6
HDGFL3Q9Y3E1 AP000676.1-201ENST00000533307 52 ntBASIC-1.21□□□□□ -2.6
HDGFL3Q9Y3E1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.21□□□□□ -2.6
HDGFL3Q9Y3E1 AP001362.1-201ENST00000625165 124 ntBASIC-1.21□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.22□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.22□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-876P-201ENST00000391295 104 ntBASIC-1.22□□□□□ -2.6
HDGFL3Q9Y3E1 AC098614.3-201ENST00000438957 440 ntBASIC-1.22□□□□□ -2.6
HDGFL3Q9Y3E1 AC244090.1-201ENST00000441884 93 ntBASIC-1.22□□□□□ -2.6
HDGFL3Q9Y3E1 MIR2113-201ENST00000459007 91 ntBASIC-1.22□□□□□ -2.6
HDGFL3Q9Y3E1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.22□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.23□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.23□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-571P-201ENST00000384128 107 ntBASIC-1.23□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-381P-201ENST00000391259 108 ntBASIC-1.23□□□□□ -2.61
HDGFL3Q9Y3E1 RNU7-55P-201ENST00000459426 62 ntBASIC-1.23□□□□□ -2.61
HDGFL3Q9Y3E1 SCARNA17-201ENST00000516183 144 ntBASIC-1.23□□□□□ -2.61
HDGFL3Q9Y3E1 RNU2-35P-201ENST00000516446 142 ntBASIC-1.23□□□□□ -2.61
HDGFL3Q9Y3E1 SNORD38.3-201ENST00000516599 73 ntBASIC-1.23□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-502P-201ENST00000362419 108 ntBASIC-1.24□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.24□□□□□ -2.61
HDGFL3Q9Y3E1 RNU4-36P-201ENST00000364294 144 ntBASIC-1.24□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.24□□□□□ -2.61
HDGFL3Q9Y3E1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.24□□□□□ -2.61
HDGFL3Q9Y3E1 SNORA51.5-201ENST00000384126 131 ntBASIC-1.25□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.25□□□□□ -2.61
HDGFL3Q9Y3E1 SPINT5P-201ENST00000448174 155 ntBASIC-1.25□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.25□□□□□ -2.61
HDGFL3Q9Y3E1 SNORD19B-201ENST00000459623 84 ntBASIC-1.25□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-86P-201ENST00000606534 107 ntBASIC-1.25□□□□□ -2.61
HDGFL3Q9Y3E1 AC093783.1-201ENST00000612976 329 ntBASIC-1.25□□□□□ -2.61
HDGFL3Q9Y3E1 MIR1302-1-201ENST00000637932 143 ntBASIC-1.25□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 RNU4-69P-201ENST00000410677 143 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 SNORD2.1-201ENST00000458762 69 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 SERF1AP1-201ENST00000514575 187 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 AC007012.1-201ENST00000567192 175 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 AC145423.2-201ENST00000610631 239 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.26□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-30P-201ENST00000384561 107 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 SNORD116-4-201ENST00000384733 96 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 MIR1252-201ENST00000408861 65 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 snoU13.13-201ENST00000458842 104 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 snoU13.11-201ENST00000459219 104 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-287P-201ENST00000516230 98 ntBASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.27□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.28□□□□□ -2.61
HDGFL3Q9Y3E1 RNU6-472P-201ENST00000384299 107 ntBASIC-1.28□□□□□ -2.61
HDGFL3Q9Y3E1 MIR652-201ENST00000385278 98 ntBASIC-1.28□□□□□ -2.61
HDGFL3Q9Y3E1 SNORA49-201ENST00000386157 136 ntBASIC-1.28□□□□□ -2.61
HDGFL3Q9Y3E1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
HDGFL3Q9Y3E1 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.28□□□□□ -2.61
HDGFL3Q9Y3E1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.28□□□□□ -2.61
HDGFL3Q9Y3E1 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 SNORD115-25-201ENST00000362619 82 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 RNU6-690P-201ENST00000365242 106 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 RNU6-823P-201ENST00000391042 103 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 RNA5SP236-201ENST00000516169 116 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 RNA5SP476-201ENST00000516613 103 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 SNORA40.17-201ENST00000517256 115 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 RNU2-4P-201ENST00000606190 192 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 AL132765.2-201ENST00000610812 351 ntBASIC-1.29□□□□□ -2.62
HDGFL3Q9Y3E1 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.3□□□□□ -2.62
HDGFL3Q9Y3E1 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.3□□□□□ -2.62
HDGFL3Q9Y3E1 MIR518B-201ENST00000385127 83 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms