Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.58□□□□□ -2
COL17A1Q9UMD9 AL020996.3-201ENST00000606617 222 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 SNORA25.4-201ENST00000363666 124 ntBASIC2.57□□□□□ -2
COL17A1Q9UMD9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.57□□□□□ -2
COL17A1Q9UMD9 RNU6-811P-201ENST00000384069 107 ntBASIC2.57□□□□□ -2
COL17A1Q9UMD9 RNU2-7P-201ENST00000410794 178 ntBASIC2.57□□□□□ -2
COL17A1Q9UMD9 RNU6-977P-201ENST00000516411 103 ntBASIC2.57□□□□□ -2
COL17A1Q9UMD9 RNU7-137P-201ENST00000516788 62 ntBASIC2.57□□□□□ -2
COL17A1Q9UMD9 Y_RNA.12-201ENST00000362393 112 ntBASIC2.56□□□□□ -2
COL17A1Q9UMD9 Y_RNA.443-201ENST00000384135 111 ntBASIC2.56□□□□□ -2
COL17A1Q9UMD9 RNU1-148P-201ENST00000384472 162 ntBASIC2.56□□□□□ -2
COL17A1Q9UMD9 MIR1323-201ENST00000408090 73 ntBASIC2.56□□□□□ -2
COL17A1Q9UMD9 BX510359.4-201ENST00000423750 193 ntBASIC2.56□□□□□ -2
COL17A1Q9UMD9 AC015818.7-201ENST00000428754 109 ntBASIC2.56□□□□□ -2
COL17A1Q9UMD9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.56□□□□□ -2
COL17A1Q9UMD9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.56□□□□□ -2
COL17A1Q9UMD9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL17A1Q9UMD9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
COL17A1Q9UMD9 SNORD114-10-201ENST00000363409 72 ntBASIC2.55□□□□□ -2
COL17A1Q9UMD9 SNORA70.7-201ENST00000384159 133 ntBASIC2.55□□□□□ -2
COL17A1Q9UMD9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.55□□□□□ -2
COL17A1Q9UMD9 AC110620.1-201ENST00000416042 228 ntBASIC2.55□□□□□ -2
COL17A1Q9UMD9 AL606517.2-201ENST00000442855 241 ntBASIC2.55□□□□□ -2
COL17A1Q9UMD9 RPS29P29-201ENST00000456396 171 ntBASIC2.55□□□□□ -2
COL17A1Q9UMD9 AL161722.3-201ENST00000605789 2983 ntBASIC2.55□□□□□ -2
COL17A1Q9UMD9 RNU6-681P-201ENST00000364012 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 Y_RNA.236-201ENST00000364427 111 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 SNORD90-201ENST00000391145 111 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-447P-201ENST00000410293 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-1118P-201ENST00000410382 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-1076P-201ENST00000410397 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-355P-201ENST00000410427 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-791P-201ENST00000410467 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-705P-201ENST00000410601 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-1100P-201ENST00000410691 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-860P-201ENST00000410860 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-602P-201ENST00000411155 105 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-1217P-201ENST00000411276 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-785P-201ENST00000411324 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU1-40P-201ENST00000516816 164 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU1-97P-201ENST00000516872 164 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 MIR5694-201ENST00000581190 76 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 U6.90-201ENST00000614007 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 U6.70-201ENST00000620287 104 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 AP001362.1-201ENST00000625165 124 ntBASIC2.54□□□□□ -2
COL17A1Q9UMD9 RNU6-829P-201ENST00000363700 112 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 RNU6-132P-201ENST00000383863 107 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 RNU6-895P-201ENST00000384125 103 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.53□□□□□ -2
COL17A1Q9UMD9 AC005908.1-201ENST00000468701 347 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 AC023790.1-201ENST00000482174 347 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 MIR4511-201ENST00000582784 87 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 MIR4536-1-201ENST00000583537 88 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 AC022202.1-201ENST00000613515 211 ntBASIC2.53□□□□□ -2
COL17A1Q9UMD9 MIRLET7C-201ENST00000362160 84 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 SNORA1.2-201ENST00000365189 134 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 SNORD45A-201ENST00000384512 84 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 MIR520A-201ENST00000384862 85 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 Y_RNA.648-201ENST00000459455 110 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 YWHAEP2-201ENST00000580066 112 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 YWHAEP3-201ENST00000582767 121 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 AP000648.3-201ENST00000623539 4507 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 HSBP1P2-201ENST00000299671 229 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 Y_RNA.36-201ENST00000362602 112 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 RNU6-833P-201ENST00000363486 107 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 AL627230.6-201ENST00000611129 280 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 AC022513.1-201ENST00000624512 117 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 MIR7978-201ENST00000636158 59 ntBASIC2.52□□□□□ -2.01
COL17A1Q9UMD9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 SNORA24-201ENST00000384096 131 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 MIR516B2-201ENST00000385190 85 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 HSPE1P24-201ENST00000450782 238 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 RNU7-73P-201ENST00000458743 63 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 snoU13.17-201ENST00000458802 104 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 RNU7-12P-201ENST00000516030 62 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 RNA5SP481-201ENST00000516814 122 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 MIR3064-201ENST00000581130 66 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 AC243994.1-201ENST00000618627 109 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 U1.36-201ENST00000620684 176 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 AC103706.3-201ENST00000636297 85 ntBASIC2.51□□□□□ -2.01
COL17A1Q9UMD9 RNU6-154P-201ENST00000384306 106 ntBASIC2.5□□□□□ -2.01
COL17A1Q9UMD9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.5□□□□□ -2.01
COL17A1Q9UMD9 AC104996.3-201ENST00000590718 94 ntBASIC2.5□□□□□ -2.01
COL17A1Q9UMD9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 Y_RNA.491-201ENST00000384417 107 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 RNU6-1237P-201ENST00000384777 107 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 MIR518A2-201ENST00000384966 87 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 MIR452-201ENST00000385020 85 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 SNORD28B-201ENST00000390993 75 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 MIR942-201ENST00000401111 86 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 AL157834.3-201ENST00000615543 103 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 MIR6767-201ENST00000637302 66 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COL17A1Q9UMD9 MIR598-201ENST00000384868 97 ntBASIC2.48□□□□□ -2.01
COL17A1Q9UMD9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms