Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.89□□□□□ -2.11
BRPF3Q9ULD4 SNORA80D-201ENST00000384488 135 ntBASIC1.89□□□□□ -2.11
BRPF3Q9ULD4 AL591806.2-201ENST00000433122 173 ntBASIC1.89□□□□□ -2.11
BRPF3Q9ULD4 MIR4500-201ENST00000579472 76 ntBASIC1.89□□□□□ -2.11
BRPF3Q9ULD4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 RNU1-36P-201ENST00000365130 165 ntBASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 Y_RNA.558-201ENST00000384685 113 ntBASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 MIR150-201ENST00000385048 84 ntBASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 SNORD83.1-201ENST00000411362 77 ntBASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 RNU7-21P-201ENST00000459430 62 ntBASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 MIR4491-201ENST00000581087 68 ntBASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 AC103810.7-201ENST00000607821 91 ntBASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
BRPF3Q9ULD4 AC023934.1-201ENST00000574529 2389 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 RNA5SP190-201ENST00000365222 118 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 SNORD13-201ENST00000459299 104 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 RNA5SP61-201ENST00000516453 100 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 AC023827.1-201ENST00000569247 97 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 MIR502-201ENST00000606349 86 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 AC106800.4-201ENST00000614905 153 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 MIR7974-201ENST00000615835 79 ntBASIC1.87□□□□□ -2.11
BRPF3Q9ULD4 RNU6-934P-201ENST00000365154 107 ntBASIC1.86□□□□□ -2.11
BRPF3Q9ULD4 SNORD111-201ENST00000408139 94 ntBASIC1.86□□□□□ -2.11
BRPF3Q9ULD4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.86□□□□□ -2.11
BRPF3Q9ULD4 RNU7-185P-201ENST00000459215 60 ntBASIC1.86□□□□□ -2.11
BRPF3Q9ULD4 SNORD79.1-201ENST00000516069 84 ntBASIC1.86□□□□□ -2.11
BRPF3Q9ULD4 AC026421.1-201ENST00000519101 163 ntBASIC1.86□□□□□ -2.11
BRPF3Q9ULD4 MIR6715A-201ENST00000615929 79 ntBASIC1.86□□□□□ -2.11
BRPF3Q9ULD4 AC008163.1-202ENST00000636004 2889 ntBASIC1.86□□□□□ -2.11
BRPF3Q9ULD4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.85□□□□□ -2.11
BRPF3Q9ULD4 MIR1323-201ENST00000408090 73 ntBASIC1.85□□□□□ -2.11
BRPF3Q9ULD4 MIR1257-201ENST00000408490 117 ntBASIC1.85□□□□□ -2.11
BRPF3Q9ULD4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.85□□□□□ -2.11
BRPF3Q9ULD4 RNU6-403P-201ENST00000363163 104 ntBASIC1.84□□□□□ -2.11
BRPF3Q9ULD4 RNU7-90P-201ENST00000459216 62 ntBASIC1.84□□□□□ -2.11
BRPF3Q9ULD4 SNORA25.16-201ENST00000516741 121 ntBASIC1.84□□□□□ -2.11
BRPF3Q9ULD4 AC104984.5-201ENST00000586878 94 ntBASIC1.84□□□□□ -2.11
BRPF3Q9ULD4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 Y_RNA.190-201ENST00000363964 101 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 SNORD73B-201ENST00000364394 72 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 RNU6-53P-201ENST00000365367 106 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 SNORD58A-201ENST00000383875 65 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 SNORA72.6-201ENST00000384520 129 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 RNU6-939P-201ENST00000384634 107 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 SNRPGP12-201ENST00000449481 213 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 RNU6-531P-201ENST00000516694 104 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 SNORA70.22-201ENST00000517160 124 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 MIR4771-2-201ENST00000577758 74 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 MIR4771-1-201ENST00000582617 74 ntBASIC1.83□□□□□ -2.12
BRPF3Q9ULD4 RNU1-17P-201ENST00000363022 152 ntBASIC1.82□□□□□ -2.12
BRPF3Q9ULD4 SNORA25.8-201ENST00000364831 128 ntBASIC1.82□□□□□ -2.12
BRPF3Q9ULD4 RNU6-1134P-201ENST00000365156 101 ntBASIC1.82□□□□□ -2.12
BRPF3Q9ULD4 MIR618-201ENST00000385287 98 ntBASIC1.82□□□□□ -2.12
BRPF3Q9ULD4 RNU4-83P-201ENST00000410863 133 ntBASIC1.82□□□□□ -2.12
BRPF3Q9ULD4 AC015818.7-201ENST00000428754 109 ntBASIC1.82□□□□□ -2.12
BRPF3Q9ULD4 AC087499.7-201ENST00000441958 109 ntBASIC1.82□□□□□ -2.12
BRPF3Q9ULD4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.82□□□□□ -2.12
BRPF3Q9ULD4 RNU4-58P-201ENST00000363192 141 ntBASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 RNU6-1125P-201ENST00000363601 107 ntBASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 SNORD116-10-201ENST00000363791 102 ntBASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 RNU6-480P-201ENST00000384332 107 ntBASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 SNORA17.3-201ENST00000391159 129 ntBASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 BX276092.1-201ENST00000427368 251 ntBASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 MIR3124-201ENST00000582636 67 ntBASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
BRPF3Q9ULD4 RNU6-571P-201ENST00000384128 107 ntBASIC1.8□□□□□ -2.12
BRPF3Q9ULD4 MIR181B2-201ENST00000385004 89 ntBASIC1.8□□□□□ -2.12
BRPF3Q9ULD4 SNORA72.7-201ENST00000516349 94 ntBASIC1.8□□□□□ -2.12
BRPF3Q9ULD4 RNU7-40P-201ENST00000516397 64 ntBASIC1.8□□□□□ -2.12
BRPF3Q9ULD4 RNU6-850P-201ENST00000516934 103 ntBASIC1.8□□□□□ -2.12
BRPF3Q9ULD4 RNU6-548P-201ENST00000517083 115 ntBASIC1.8□□□□□ -2.12
BRPF3Q9ULD4 AL645939.4-201ENST00000604495 135 ntBASIC1.8□□□□□ -2.12
BRPF3Q9ULD4 MIR7843-201ENST00000622274 79 ntBASIC1.8□□□□□ -2.12
BRPF3Q9ULD4 RPS26P5-201ENST00000418544 335 ntBASIC1.79□□□□□ -2.12
BRPF3Q9ULD4 RNU6-762P-201ENST00000517107 102 ntBASIC1.79□□□□□ -2.12
BRPF3Q9ULD4 AC020891.4-201ENST00000605745 93 ntBASIC1.79□□□□□ -2.12
BRPF3Q9ULD4 MIR125B2-201ENST00000385128 89 ntBASIC1.78□□□□□ -2.12
BRPF3Q9ULD4 MIR1302-4-201ENST00000408701 150 ntBASIC1.78□□□□□ -2.12
BRPF3Q9ULD4 RNU6-955P-201ENST00000410497 104 ntBASIC1.78□□□□□ -2.12
BRPF3Q9ULD4 RNU6-994P-201ENST00000410507 111 ntBASIC1.78□□□□□ -2.12
BRPF3Q9ULD4 AC015712.3-201ENST00000559380 164 ntBASIC1.78□□□□□ -2.12
BRPF3Q9ULD4 MIR4303-201ENST00000581299 66 ntBASIC1.78□□□□□ -2.12
BRPF3Q9ULD4 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
BRPF3Q9ULD4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.77□□□□□ -2.13
BRPF3Q9ULD4 MIR222-201ENST00000384992 110 ntBASIC1.77□□□□□ -2.13
BRPF3Q9ULD4 SNORD12-201ENST00000391002 90 ntBASIC1.77□□□□□ -2.13
BRPF3Q9ULD4 snoU13.23-201ENST00000458863 104 ntBASIC1.77□□□□□ -2.13
BRPF3Q9ULD4 MIR6082-201ENST00000613604 109 ntBASIC1.77□□□□□ -2.13
BRPF3Q9ULD4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
BRPF3Q9ULD4 MIR26B-201ENST00000362251 77 ntBASIC1.76□□□□□ -2.13
BRPF3Q9ULD4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.76□□□□□ -2.13
BRPF3Q9ULD4 MIR1304-201ENST00000408243 91 ntBASIC1.76□□□□□ -2.13
BRPF3Q9ULD4 AL513043.2-201ENST00000573941 143 ntBASIC1.76□□□□□ -2.13
BRPF3Q9ULD4 MIR8066-201ENST00000617280 78 ntBASIC1.76□□□□□ -2.13
BRPF3Q9ULD4 AC025521.1-201ENST00000621624 286 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 249.6 ms