Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
DDX41Q9UJV9 Y_RNA.81-201ENST00000362997 102 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 Y_RNA.163-201ENST00000363702 113 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 SNORD38.2-201ENST00000384470 69 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 MIR19B1-201ENST00000384829 87 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 FABP5P4-201ENST00000437203 171 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 PDCD5P2-201ENST00000507570 312 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 AL136317.1-201ENST00000612653 226 ntBASIC1.55□□□□□ -2.16
DDX41Q9UJV9 RNU6-755P-201ENST00000364400 103 ntBASIC1.54□□□□□ -2.16
DDX41Q9UJV9 RNY1P2-201ENST00000364820 117 ntBASIC1.54□□□□□ -2.16
DDX41Q9UJV9 Y_RNA.360-201ENST00000365512 102 ntBASIC1.54□□□□□ -2.16
DDX41Q9UJV9 MIR200A-201ENST00000384875 90 ntBASIC1.54□□□□□ -2.16
DDX41Q9UJV9 MIR100-201ENST00000385259 80 ntBASIC1.54□□□□□ -2.16
DDX41Q9UJV9 AL031737.1-201ENST00000450125 223 ntBASIC1.54□□□□□ -2.16
DDX41Q9UJV9 RNA5SP102-201ENST00000516865 106 ntBASIC1.54□□□□□ -2.16
DDX41Q9UJV9 AP001362.1-201ENST00000625165 124 ntBASIC1.54□□□□□ -2.16
DDX41Q9UJV9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
DDX41Q9UJV9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
DDX41Q9UJV9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
DDX41Q9UJV9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.53□□□□□ -2.16
DDX41Q9UJV9 RNU4-36P-201ENST00000364294 144 ntBASIC1.53□□□□□ -2.16
DDX41Q9UJV9 MIR605-201ENST00000385078 83 ntBASIC1.53□□□□□ -2.16
DDX41Q9UJV9 RNU4-83P-201ENST00000410863 133 ntBASIC1.53□□□□□ -2.16
DDX41Q9UJV9 RPS29P28-201ENST00000446439 141 ntBASIC1.53□□□□□ -2.16
DDX41Q9UJV9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.53□□□□□ -2.16
DDX41Q9UJV9 DEFB131E-201ENST00000532329 154 ntBASIC1.53□□□□□ -2.16
DDX41Q9UJV9 AC096720.1-201ENST00000604441 183 ntBASIC1.53□□□□□ -2.16
DDX41Q9UJV9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.53□□□□□ -2.16
DDX41Q9UJV9 RNU6-403P-201ENST00000363163 104 ntBASIC1.52□□□□□ -2.17
DDX41Q9UJV9 MIR125B2-201ENST00000385128 89 ntBASIC1.52□□□□□ -2.17
DDX41Q9UJV9 RNU6-679P-201ENST00000391003 106 ntBASIC1.52□□□□□ -2.17
DDX41Q9UJV9 RNU6-977P-201ENST00000516411 103 ntBASIC1.52□□□□□ -2.17
DDX41Q9UJV9 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
DDX41Q9UJV9 MIR4694-201ENST00000578534 80 ntBASIC1.52□□□□□ -2.17
DDX41Q9UJV9 Y_RNA.10-201ENST00000362371 110 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 RNU6-1313P-201ENST00000362622 102 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 SNORA63.4-201ENST00000362763 126 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 RNU6-364P-201ENST00000384387 107 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 RNU6-106P-201ENST00000384405 107 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 AC141557.1-201ENST00000540982 400 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 MIR4491-201ENST00000581087 68 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 MIR4452-201ENST00000583004 71 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 MIR4676-201ENST00000583078 72 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 MIR3660-201ENST00000584845 100 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 MIR6078-201ENST00000611069 100 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 uc_338.28-201ENST00000612082 187 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 U6.109-201ENST00000636749 87 ntBASIC1.51□□□□□ -2.17
DDX41Q9UJV9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
DDX41Q9UJV9 RNY3P2-201ENST00000362918 102 ntBASIC1.5□□□□□ -2.17
DDX41Q9UJV9 RNA5SP133-201ENST00000363368 119 ntBASIC1.5□□□□□ -2.17
DDX41Q9UJV9 SNORA72.6-201ENST00000384520 129 ntBASIC1.5□□□□□ -2.17
DDX41Q9UJV9 MIR618-201ENST00000385287 98 ntBASIC1.5□□□□□ -2.17
DDX41Q9UJV9 MIR938-201ENST00000401216 83 ntBASIC1.5□□□□□ -2.17
DDX41Q9UJV9 RNA5SP404-201ENST00000517118 132 ntBASIC1.5□□□□□ -2.17
DDX41Q9UJV9 Y_RNA.78-201ENST00000362970 110 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 RNU4-58P-201ENST00000363192 141 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 SNORA51.5-201ENST00000384126 131 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 MIR942-201ENST00000401111 86 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 RNU6-554P-201ENST00000410466 106 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 AC004223.1-201ENST00000479840 271 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 AC138749.4-201ENST00000563970 127 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 MIR376B-201ENST00000614515 100 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 AL442128.1-201ENST00000615151 90 ntBASIC1.49□□□□□ -2.17
DDX41Q9UJV9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
DDX41Q9UJV9 RNU6-832P-201ENST00000363319 107 ntBASIC1.48□□□□□ -2.17
DDX41Q9UJV9 RNU1-124P-201ENST00000363861 145 ntBASIC1.48□□□□□ -2.17
DDX41Q9UJV9 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
DDX41Q9UJV9 U7.7-201ENST00000459276 60 ntBASIC1.48□□□□□ -2.17
DDX41Q9UJV9 RNU7-156P-201ENST00000517214 74 ntBASIC1.48□□□□□ -2.17
DDX41Q9UJV9 AC020891.4-201ENST00000605745 93 ntBASIC1.48□□□□□ -2.17
DDX41Q9UJV9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 RNU6-1099P-201ENST00000363533 107 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 SNORD38.1-201ENST00000363863 68 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 SNORD114-24-201ENST00000365029 72 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 Y_RNA.377-201ENST00000365644 108 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 RNU6-756P-201ENST00000383997 107 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 RNU6-42P-201ENST00000384165 107 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 RNU6-1201P-201ENST00000384227 107 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 MIR34C-201ENST00000384831 77 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 MIR577-201ENST00000385196 96 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 MIR1827-201ENST00000408549 66 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 AC004941.2-201ENST00000427009 228 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 AC015818.7-201ENST00000428754 109 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 AC087499.7-201ENST00000441958 109 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.47□□□□□ -2.17
DDX41Q9UJV9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.47□□□□□ -2.17
DDX41Q9UJV9 SNORD114-22-201ENST00000365423 72 ntBASIC1.46□□□□□ -2.18
DDX41Q9UJV9 RNU6-1307P-201ENST00000391012 103 ntBASIC1.46□□□□□ -2.18
DDX41Q9UJV9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.46□□□□□ -2.18
DDX41Q9UJV9 AL353813.1-201ENST00000440700 253 ntBASIC1.46□□□□□ -2.18
DDX41Q9UJV9 MIR4500-201ENST00000579472 76 ntBASIC1.46□□□□□ -2.18
DDX41Q9UJV9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
DDX41Q9UJV9 Y_RNA.466-201ENST00000384294 113 ntBASIC1.45□□□□□ -2.18
DDX41Q9UJV9 RNU6-939P-201ENST00000384634 107 ntBASIC1.45□□□□□ -2.18
DDX41Q9UJV9 SNORD89-201ENST00000390981 114 ntBASIC1.45□□□□□ -2.18
DDX41Q9UJV9 RNU1-119P-201ENST00000391122 165 ntBASIC1.45□□□□□ -2.18
DDX41Q9UJV9 AC096949.1-201ENST00000412047 152 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms