Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNORA75.2-201ENST00000391138 150 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 SNORA75.3-201ENST00000391231 150 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 MIR18B-201ENST00000454574 71 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 SNORD67.1-201ENST00000516618 108 ntBASIC1.3□□□□□ -2.2
DKK3Q9UBP4 MIR96-201ENST00000362288 78 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 RNU6-766P-201ENST00000362478 107 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 Y_RNA.155-201ENST00000363632 101 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 MIR206-201ENST00000384872 86 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 RNU6-679P-201ENST00000391003 106 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 AL353813.1-201ENST00000440700 253 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 RNU7-21P-201ENST00000459430 62 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 MIR4694-201ENST00000578534 80 ntBASIC1.29□□□□□ -2.2
DKK3Q9UBP4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
DKK3Q9UBP4 RNU6-1313P-201ENST00000362622 102 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 RNY3P2-201ENST00000362918 102 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 RNU6-1099P-201ENST00000363533 107 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 SNORD113.3-201ENST00000364630 78 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 Y_RNA.328-201ENST00000365208 113 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 Y_RNA.360-201ENST00000365512 102 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 OR2A41P-201ENST00000473586 105 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 SNORD79.1-201ENST00000516069 84 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
DKK3Q9UBP4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.28□□□□□ -2.2
DKK3Q9UBP4 Y_RNA.377-201ENST00000365644 108 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 RNU6-756P-201ENST00000383997 107 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 SNORA51.5-201ENST00000384126 131 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 MIR605-201ENST00000385078 83 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 RNU6-910P-201ENST00000390844 107 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 MIR548J-201ENST00000408833 112 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 RNU6-904P-201ENST00000516206 101 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 MIR3613-201ENST00000579844 87 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
DKK3Q9UBP4 MIR577-201ENST00000385196 96 ntBASIC1.26□□□□□ -2.21
DKK3Q9UBP4 RNA5SP95-201ENST00000410319 137 ntBASIC1.26□□□□□ -2.21
DKK3Q9UBP4 SNORA7.5-201ENST00000410672 110 ntBASIC1.26□□□□□ -2.21
DKK3Q9UBP4 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
DKK3Q9UBP4 RNU6-537P-201ENST00000517277 103 ntBASIC1.26□□□□□ -2.21
DKK3Q9UBP4 RN7SL793P-201ENST00000583259 296 ntBASIC1.26□□□□□ -2.21
DKK3Q9UBP4 uc_338.6-201ENST00000613544 171 ntBASIC1.26□□□□□ -2.21
DKK3Q9UBP4 AC106800.4-201ENST00000614905 153 ntBASIC1.26□□□□□ -2.21
DKK3Q9UBP4 MIR450A1-201ENST00000362262 91 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.10-201ENST00000362371 110 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 RNU6-832P-201ENST00000363319 107 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 RNU6-32P-201ENST00000383948 107 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 RNU6-13P-201ENST00000384248 107 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 SNORA2B-201ENST00000384583 137 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 RNU6-12P-201ENST00000384604 107 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 RNU6-41P-201ENST00000384741 107 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 RNU6-1321P-201ENST00000390905 107 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 RNU7-90P-201ENST00000459216 62 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.818-201ENST00000618813 71 ntBASIC1.25□□□□□ -2.21
DKK3Q9UBP4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.30-201ENST00000362572 97 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 RNU4-36P-201ENST00000364294 144 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.448-201ENST00000384185 108 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 RNU6-1201P-201ENST00000384227 107 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 U8.15-201ENST00000390947 134 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 RNU6-1307P-201ENST00000391012 103 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 RNU7-48P-201ENST00000458875 63 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 DEFB131E-201ENST00000532329 154 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 AC141557.1-201ENST00000540982 400 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 AL512310.12-203ENST00000640543 90 ntBASIC1.24□□□□□ -2.21
DKK3Q9UBP4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
DKK3Q9UBP4 RNY1P2-201ENST00000364820 117 ntBASIC1.23□□□□□ -2.21
DKK3Q9UBP4 RNY1P4-201ENST00000384595 115 ntBASIC1.23□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.544-201ENST00000384650 113 ntBASIC1.23□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.601-201ENST00000410500 113 ntBASIC1.23□□□□□ -2.21
DKK3Q9UBP4 AC096949.1-201ENST00000412047 152 ntBASIC1.23□□□□□ -2.21
DKK3Q9UBP4 AC133485.1-201ENST00000567176 124 ntBASIC1.23□□□□□ -2.21
DKK3Q9UBP4 AL442128.1-201ENST00000615151 90 ntBASIC1.23□□□□□ -2.21
DKK3Q9UBP4 AC105081.1-201ENST00000617727 106 ntBASIC1.23□□□□□ -2.21
DKK3Q9UBP4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.23□□□□□ -2.21
DKK3Q9UBP4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
DKK3Q9UBP4 RNU6-865P-201ENST00000364772 107 ntBASIC1.22□□□□□ -2.21
DKK3Q9UBP4 Y_RNA.495-201ENST00000384435 112 ntBASIC1.22□□□□□ -2.21
DKK3Q9UBP4 UBL5P1-201ENST00000507979 193 ntBASIC1.22□□□□□ -2.21
DKK3Q9UBP4 RNU6-158P-201ENST00000517104 100 ntBASIC1.22□□□□□ -2.21
DKK3Q9UBP4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
DKK3Q9UBP4 AC008163.1-202ENST00000636004 2889 ntBASIC1.21□□□□□ -2.22
DKK3Q9UBP4 MIR590-201ENST00000385008 97 ntBASIC1.21□□□□□ -2.22
DKK3Q9UBP4 MIR216A-201ENST00000385063 110 ntBASIC1.21□□□□□ -2.22
DKK3Q9UBP4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.21□□□□□ -2.22
DKK3Q9UBP4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.21□□□□□ -2.22
DKK3Q9UBP4 RNU6-168P-201ENST00000516189 101 ntBASIC1.21□□□□□ -2.22
DKK3Q9UBP4 RNU6-1006P-201ENST00000516998 103 ntBASIC1.21□□□□□ -2.22
DKK3Q9UBP4 MIR376B-201ENST00000614515 100 ntBASIC1.21□□□□□ -2.22
DKK3Q9UBP4 AP001362.1-201ENST00000625165 124 ntBASIC1.21□□□□□ -2.22
DKK3Q9UBP4 SNORD38.1-201ENST00000363863 68 ntBASIC1.2□□□□□ -2.22
DKK3Q9UBP4 RNU6-934P-201ENST00000365154 107 ntBASIC1.2□□□□□ -2.22
DKK3Q9UBP4 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms